RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 FAM157AC9JC47 383 aa12.8□□□□□ -0.36
LEMD3-201ENST00000308330 MS4A18H0YCH9 400 aa12.8□□□□□ -0.36
LEMD3-201ENST00000308330 MS4A18Q3C1V0 323 aa12.8□□□□□ -0.36
LEMD3-201ENST00000308330 OR1L1Q8NH94 360 aa12.8□□□□□ -0.36
LEMD3-201ENST00000308330 FBXL15Q9H469 300 aa12.8□□□□□ -0.36
LEMD3-201ENST00000308330 MYO18BQ8IUG5 2567 aa12.8□□□□□ -0.36
LEMD3-201ENST00000308330 OTOGLQ3ZCN5 2332 aa12.8□□□□□ -0.36
LEMD3-201ENST00000308330 ZNF407Q9C0G0 2248 aa12.8□□□□□ -0.36
LEMD3-201ENST00000308330 VMA21Q3ZAQ7 101 aa12.8□□□□□ -0.36
LEMD3-201ENST00000308330 ATP5G2Q06055 141 aa12.8□□□□□ -0.36
LEMD3-201ENST00000308330 TBR1Q16650 682 aa12.8□□□□□ -0.36
LEMD3-201ENST00000308330 OR1L8Q8NGR8 309 aa12.8□□□□□ -0.36
LEMD3-201ENST00000308330 FLVCR1-AS1Q8TAF5 88 aa12.8□□□□□ -0.36
LEMD3-201ENST00000308330 FNDC1Q4ZHG4 1894 aaPredicted RBP12.8□□□□□ -0.36
LEMD3-201ENST00000308330 ASCL5Q7RTU5 278 aa12.79□□□□□ -0.36
LEMD3-201ENST00000308330 OSTCQ9NRP0 149 aa12.79□□□□□ -0.36
LEMD3-201ENST00000308330 GCHFRP30047 84 aa12.79□□□□□ -0.36
LEMD3-201ENST00000308330 VDAC2P45880 294 aaPredicted RBP12.79□□□□□ -0.36
LEMD3-201ENST00000308330 FAM27E3Q08E93 113 aa12.79□□□□□ -0.36
LEMD3-201ENST00000308330 CEACAM4O75871 244 aa12.79□□□□□ -0.36
LEMD3-201ENST00000308330 NFAM1Q8NET5 270 aaPredicted RBP12.79□□□□□ -0.36
LEMD3-201ENST00000308330 NXT2Q9NPJ8 142 aaKnown RBP12.79□□□□□ -0.36
LEMD3-201ENST00000308330 ANK1P16157 1881 aa12.79□□□□□ -0.36
LEMD3-201ENST00000308330 SRCAPQ6ZRS2 3230 aa12.78□□□□□ -0.36
LEMD3-201ENST00000308330 RPL30P62888 115 aaKnown RBP12.78□□□□□ -0.36
LEMD3-201ENST00000308330 KLRD1Q13241 179 aa12.78□□□□□ -0.36
LEMD3-201ENST00000308330 SLC25A2Q9BXI2 301 aa12.78□□□□□ -0.36
LEMD3-201ENST00000308330 RNASE7Q9H1E1 156 aaKnown RBP12.78□□□□□ -0.36
LEMD3-201ENST00000308330 COL4A6Q14031 1691 aa12.78□□□□□ -0.36
LEMD3-201ENST00000308330 LOC102723996A0A087X1L8 192 aa12.78□□□□□ -0.36
LEMD3-201ENST00000308330 TECTAO75443 2155 aa12.78□□□□□ -0.36
LEMD3-201ENST00000308330 MTCL1Q9Y4B5 1905 aaKnown RBP12.78□□□□□ -0.36
LEMD3-201ENST00000308330 RRHO14718 337 aa12.78□□□□□ -0.36
LEMD3-201ENST00000308330 COX8AP10176 69 aa12.78□□□□□ -0.36
LEMD3-201ENST00000308330 YPEL3P61236 119 aaPredicted RBP12.78□□□□□ -0.36
LEMD3-201ENST00000308330 KIR3DL3Q8N743 410 aa12.78□□□□□ -0.36
LEMD3-201ENST00000308330 WDR81Q562E7 1941 aa12.78□□□□□ -0.36
LEMD3-201ENST00000308330 TRAV24A0A0B4J272 114 aa12.78□□□□□ -0.36
LEMD3-201ENST00000308330 FCGR3BO75015 233 aa12.78□□□□□ -0.36
LEMD3-201ENST00000308330 MIC13Q5XKP0 118 aa12.78□□□□□ -0.36
LEMD3-201ENST00000308330 C10orf35Q96D05 121 aa12.78□□□□□ -0.36
LEMD3-201ENST00000308330 REG1AP05451 166 aa12.77□□□□□ -0.36
LEMD3-201ENST00000308330 OR5P3Q8WZ94 311 aa12.77□□□□□ -0.36
LEMD3-201ENST00000308330 IGHV3OR15-7A0A075B7D8 119 aa12.77□□□□□ -0.37
LEMD3-201ENST00000308330 HEATR5BQ9P2D3 2071 aa12.77□□□□□ -0.37
LEMD3-201ENST00000308330 FNDC7Q5VTL7 733 aa12.77□□□□□ -0.37
LEMD3-201ENST00000308330 SLC25A47Q6Q0C1 308 aa12.77□□□□□ -0.37
LEMD3-201ENST00000308330 ZNF525Q8N782 197 aa12.77□□□□□ -0.37
LEMD3-201ENST00000308330 GATAD1Q8WUU5 269 aa12.77□□□□□ -0.37
LEMD3-201ENST00000308330 ZIC3O60481 467 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 IGHV4-39P01824 125 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 C11orf68Q9H3H3 251 aaKnown RBP12.76□□□□□ -0.37
LEMD3-201ENST00000308330 JPT1Q9UK76 154 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 RFNGQ9Y644 331 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 IGKV1D-42A0A075B6H8 117 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 FABP5P3A8MUU1 101 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 F5H768 121 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 ZNF114Q8NC26 417 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 FOXC2Q99958 501 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 Q6ZT83 130 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 C3orf56Q8N813 242 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 PRSS2P07478 247 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 PPIFP30405 207 aaKnown RBP12.76□□□□□ -0.37
LEMD3-201ENST00000308330 SRSF2Q01130 221 aaKnown RBP12.76□□□□□ -0.37
LEMD3-201ENST00000308330 FAM57AQ8TBR7 257 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 MRAPQ8TCY5 172 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 ITLN1Q8WWA0 313 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 GFI1Q99684 422 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 CHAC1Q9BUX1 264 aa12.76□□□□□ -0.37
LEMD3-201ENST00000308330 NDUFC2O95298 119 aa12.75□□□□□ -0.37
LEMD3-201ENST00000308330 VSIRQ9H7M9 311 aa12.75□□□□□ -0.37
LEMD3-201ENST00000308330 FAM90A26D6RGX4 464 aa12.75□□□□□ -0.37
LEMD3-201ENST00000308330 C1orf162Q8NEQ5 155 aaPredicted RBP12.75□□□□□ -0.37
LEMD3-201ENST00000308330 ZNF488Q96MN9 340 aa12.75□□□□□ -0.37
LEMD3-201ENST00000308330 HIGD1CA8MV81 97 aa12.75□□□□□ -0.37
LEMD3-201ENST00000308330 RASL11BQ9BPW5 248 aa12.75□□□□□ -0.37
LEMD3-201ENST00000308330 TMEM14DPA8MWL7 114 aa12.74□□□□□ -0.37
LEMD3-201ENST00000308330 AMMECR1Q9Y4X0 333 aaPredicted RBP12.74□□□□□ -0.37
LEMD3-201ENST00000308330 SONP18583 2426 aaKnown RBP12.74□□□□□ -0.37
LEMD3-201ENST00000308330 EGR4Q05215 589 aa12.74□□□□□ -0.37
LEMD3-201ENST00000308330 C18orf32Q8TCD1 76 aa12.74□□□□□ -0.37
LEMD3-201ENST00000308330 ZC2HC1AQ96GY0 325 aa12.74□□□□□ -0.37
LEMD3-201ENST00000308330 MCRIP2Q9BUT9 160 aaKnown RBP12.74□□□□□ -0.37
LEMD3-201ENST00000308330 NPCDR1Q9BY65 106 aa12.74□□□□□ -0.37
LEMD3-201ENST00000308330 AMTNQ6UX39 209 aa12.74□□□□□ -0.37
LEMD3-201ENST00000308330 CRYGCP07315 174 aa12.74□□□□□ -0.37
LEMD3-201ENST00000308330 AMELYQ99218 206 aa12.74□□□□□ -0.37
LEMD3-201ENST00000308330 PKIGQ9Y2B9 76 aa12.74□□□□□ -0.37
LEMD3-201ENST00000308330 PRR31Q5SQ13 230 aa12.73□□□□□ -0.37
LEMD3-201ENST00000308330 RBPMS2Q6ZRY4 209 aaKnown RBP12.73□□□□□ -0.37
LEMD3-201ENST00000308330 OR4F17Q8NGA8 305 aa12.73□□□□□ -0.37
LEMD3-201ENST00000308330 CCL13Q99616 98 aa12.73□□□□□ -0.37
LEMD3-201ENST00000308330 LSM4Q9Y4Z0 139 aaKnown RBP12.73□□□□□ -0.37
LEMD3-201ENST00000308330 IGLV1-36A0A0B4J1U3 117 aa12.73□□□□□ -0.37
LEMD3-201ENST00000308330 WFDC2Q14508 124 aa12.73□□□□□ -0.37
LEMD3-201ENST00000308330 WFDC3Q8IUB2 231 aa12.73□□□□□ -0.37
LEMD3-201ENST00000308330 C1QTNF5Q9BXJ0 243 aa12.73□□□□□ -0.37
LEMD3-201ENST00000308330 ZNF826PQ6ZT77 177 aa12.73□□□□□ -0.37
LEMD3-201ENST00000308330 C15orf53Q8NAA6 179 aa12.73□□□□□ -0.37
LEMD3-201ENST00000308330 PAXXQ9BUH6 204 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms