RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 TNFRSF19Q9NS68 423 aa7.41□□□□□ -1.22
NIP7-202ENST00000254941 CUBNO60494 3623 aa7.4□□□□□ -1.22
NIP7-202ENST00000254941 SEC14L6B5MCN3 397 aa7.4□□□□□ -1.23
NIP7-202ENST00000254941 HBE1P02100 147 aa7.4□□□□□ -1.23
NIP7-202ENST00000254941 IGLC1P0CG04 106 aa7.4□□□□□ -1.23
NIP7-202ENST00000254941 GATA2P23769 480 aaPredicted RBP7.4□□□□□ -1.23
NIP7-202ENST00000254941 PPIFP30405 207 aaKnown RBP7.4□□□□□ -1.23
NIP7-202ENST00000254941 ZNF90Q03938 601 aa7.4□□□□□ -1.23
NIP7-202ENST00000254941 SSX7Q7RTT5 188 aa7.4□□□□□ -1.23
NIP7-202ENST00000254941 TMEM86BQ8N661 226 aa7.4□□□□□ -1.23
NIP7-202ENST00000254941 COMMD1Q8N668 190 aa7.4□□□□□ -1.23
NIP7-202ENST00000254941 NSD1Q96L73 2696 aaPredicted RBP7.4□□□□□ -1.23
NIP7-202ENST00000254941 CTXND1A0A1B0GTU2 59 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 WIPF1O43516 503 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 CLN5O75503 358 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 OR2J3O76001 311 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 NDUFB8O95169 186 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 BRI3O95415 125 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 MFAP4P55083 255 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 RHOGP84095 191 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 NECAP1Q8NC96 275 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 VN1R17PQ8TDU5 208 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 RAB24Q969Q5 203 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 SMR3AQ99954 134 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 C19orf24Q9BVV8 132 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 ACTR3CQ9C0K3 210 aaPredicted RBP7.39□□□□□ -1.23
NIP7-202ENST00000254941 SLC25A22Q9H936 323 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 LINC00527Q9UJ94 153 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 FBXL7Q9UJT9 491 aa7.39□□□□□ -1.23
NIP7-202ENST00000254941 SETXQ7Z333 2677 aaKnown RBP7.39□□□□□ -1.23
NIP7-202ENST00000254941 PSMB11A5LHX3 300 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 MAP1LC3B2A6NCE7 125 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 FAM181BA6NEQ2 426 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 F8W735 103 aaPredicted RBP7.38□□□□□ -1.23
NIP7-202ENST00000254941 IGKV1-17P01599 117 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 FCGR2BP31994 310 aaPredicted RBP7.38□□□□□ -1.23
NIP7-202ENST00000254941 NPBWR1P48145 328 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 CDC34P49427 236 aaPredicted RBP7.38□□□□□ -1.23
NIP7-202ENST00000254941 CCL20P78556 96 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 C15orf32Q32M92 178 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 FAM122CQ6P4D5 195 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 LCN15Q6UWW0 184 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 RBMS3Q6XE24 437 aaKnown RBP7.38□□□□□ -1.23
NIP7-202ENST00000254941 NOL4LQ96MY1 436 aaPredicted RBP7.38□□□□□ -1.23
NIP7-202ENST00000254941 TXN2Q99757 166 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 NPFFR1Q9GZQ6 430 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 MAP1LC3BQ9GZQ8 125 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 GSX1Q9H4S2 264 aaPredicted RBP7.38□□□□□ -1.23
NIP7-202ENST00000254941 ZNF355PQ9NSJ1 428 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 C21orf62Q9NYP8 219 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 TRAV30A0A087WSZ9 112 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 A0A1B0GV50 99 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 A0A1W2PPV4 95 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 H3BUA1 57 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 LY6G6DO95868 133 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 S100A1P23297 94 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 RHOBP62745 196 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 CFHR3Q02985 330 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 SCGB2A2Q13296 93 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 UQCC3Q6UW78 93 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 GATAD1Q8WUU5 269 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 FAM210AQ96ND0 272 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 SCRT1Q9BWW7 348 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 PRSS22Q9GZN4 317 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 SEPSECSQ9HD40 501 aaKnown RBP7.38□□□□□ -1.23
NIP7-202ENST00000254941 S4R3C0 116 aa7.38□□□□□ -1.23
NIP7-202ENST00000254941 FAM223BA6NKX1 122 aa7.37□□□□□ -1.23
NIP7-202ENST00000254941 GNG7O60262 68 aa7.37□□□□□ -1.23
NIP7-202ENST00000254941 IGLV1-40P01703 118 aa7.37□□□□□ -1.23
NIP7-202ENST00000254941 FOSL1P15407 271 aa7.37□□□□□ -1.23
NIP7-202ENST00000254941 PLP1P60201 277 aa7.37□□□□□ -1.23
NIP7-202ENST00000254941 DEFA5Q01523 94 aa7.37□□□□□ -1.23
NIP7-202ENST00000254941 PMS2P11Q13670 270 aa7.37□□□□□ -1.23
NIP7-202ENST00000254941 FAM223AQ8IWN6 122 aa7.37□□□□□ -1.23
NIP7-202ENST00000254941 ZNF502Q8TBZ5 544 aa7.37□□□□□ -1.23
NIP7-202ENST00000254941 TMEM37Q8WXS4 190 aa7.37□□□□□ -1.23
NIP7-202ENST00000254941 MS4A10Q96PG2 267 aa7.37□□□□□ -1.23
NIP7-202ENST00000254941 DUX5Q96PT3 197 aa7.37□□□□□ -1.23
NIP7-202ENST00000254941 PFDN5Q99471 154 aa7.37□□□□□ -1.23
NIP7-202ENST00000254941 DNAJC4Q9NNZ3 241 aa7.37□□□□□ -1.23
NIP7-202ENST00000254941 ELOA3CA0A087WX78 387 aaPredicted RBP7.36□□□□□ -1.23
NIP7-202ENST00000254941 HMGB3O15347 200 aaKnown RBP7.36□□□□□ -1.23
NIP7-202ENST00000254941 EIF3GO75821 320 aaKnown RBP eCLIP7.36□□□□□ -1.23
NIP7-202ENST00000254941 CD5P06127 495 aa7.36□□□□□ -1.23
NIP7-202ENST00000254941 FABP1P07148 127 aa7.36□□□□□ -1.23
NIP7-202ENST00000254941 OR5G3P0C626 314 aa7.36□□□□□ -1.23
NIP7-202ENST00000254941 PSG1P11464 419 aa7.36□□□□□ -1.23
NIP7-202ENST00000254941 FGF8P55075 233 aaPredicted RBP7.36□□□□□ -1.23
NIP7-202ENST00000254941 YPEL3P61236 119 aaPredicted RBP7.36□□□□□ -1.23
NIP7-202ENST00000254941 TIGITQ495A1 244 aa7.36□□□□□ -1.23
NIP7-202ENST00000254941 FAM78BQ5VT40 261 aa7.36□□□□□ -1.23
NIP7-202ENST00000254941 Q8N2B8 174 aa7.36□□□□□ -1.23
NIP7-202ENST00000254941 OR1L4Q8NGR5 311 aa7.36□□□□□ -1.23
NIP7-202ENST00000254941 ZNF702PQ9H963 129 aa7.36□□□□□ -1.23
NIP7-202ENST00000254941 CDC42EP3Q9UKI2 254 aa7.36□□□□□ -1.23
NIP7-202ENST00000254941 TRBV7-1A0A0A6YYK4 115 aa7.36□□□□□ -1.23
NIP7-202ENST00000254941 DNAJC9-AS1A6NH13 148 aa7.36□□□□□ -1.23
NIP7-202ENST00000254941 CLDN34H7C241 214 aa7.36□□□□□ -1.23
NIP7-202ENST00000254941 I3L521 148 aa7.36□□□□□ -1.23
NIP7-202ENST00000254941 TOMM40O96008 361 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms