RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 AGRNO00468 2067 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 TRAV9-2A0A087WT02 112 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 SS18L1O75177 396 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-201ENST00000249837 SMIM17P0DL12 118 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 TIMM23BQ5SRD1 257 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 TMEM136Q6ZRR5 245 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 A6NDN8 102 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 CKS2P33552 79 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 ATP5IP56385 69 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-201ENST00000249837 LURAP1LQ8IV03 231 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 OR52E5Q8NH55 327 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 RPP21Q9H633 154 aaKnown RBP3.8□□□□□ -1.8
VPS13C-201ENST00000249837 CDX4O14627 284 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-201ENST00000249837 HLA-DRB1P01911 266 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 SAA1P0DJI8 122 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-201ENST00000249837 CD40P25942 277 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 MBNL2Q5VZF2 373 aaKnown RBP3.8□□□□□ -1.8
VPS13C-201ENST00000249837 C19orf24Q9BVV8 132 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 MBNL3Q9NUK0 354 aaKnown RBP3.8□□□□□ -1.8
VPS13C-201ENST00000249837 F2Z2F3 143 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 KIR2DL2P43627 348 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-201ENST00000249837 TSKUQ8WUA8 353 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 DIRC2Q96SL1 478 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 IGHV3OR16-13A0A075B7E8 117 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 IGHV3-74A0A0B4J1X5 117 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 A8MWP6 167 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 SRRM5B3KS81 715 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 NPIPB11E5RHQ5 1161 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 J3QW42 95 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 MGPP08493 103 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 CEACAM3P40198 252 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 CD177Q8N6Q3 437 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 C1orf162Q8NEQ5 155 aaPredicted RBP3.8□□□□□ -1.8
VPS13C-201ENST00000249837 NUDT10Q8NFP7 164 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 NUDT11Q96G61 164 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 LOXL4Q96JB6 756 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 C17orf100A8MU93 164 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 IGHV1-46P01743 117 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 COLCA1Q6ZS62 124 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 DCAF16Q9NXF7 216 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 THYN1Q9P016 225 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 ZFP30Q9Y2G7 519 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 F2RL2O00254 374 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 CD59P13987 128 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 MDS2Q8NDY4 140 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 FBXL15Q9H469 300 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 PCP4P48539 62 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 NUTF2P61970 127 aaKnown RBP3.8□□□□□ -1.8
VPS13C-201ENST00000249837 BSPH1Q075Z2 132 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 TM4SF20Q53R12 229 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 C12orf54Q6X4T0 127 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 WDR31Q8NA23 367 aa3.8□□□□□ -1.8
VPS13C-201ENST00000249837 RALYQ9UKM9 306 aaKnown RBP3.8□□□□□ -1.8
VPS13C-201ENST00000249837 SCGB1C2P0DMR2 95 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 WDR86Q86TI4 376 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 BEND2Q8NDZ0 799 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 TMEM186Q96B77 213 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 SLC25A33Q9BSK2 321 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 CLEC7AQ9BXN2 247 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 SNHG12Q9BXW3 62 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 ADAMTS20P59510 1910 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 NAV2Q8IVL1 2488 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 Q6ZWC4 215 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 KCNS1Q96KK3 526 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 TMEM265A0A087WTH1 108 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 HIGD1CA8MV81 97 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 ABCA12Q86UK0 2595 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 GAGE10A6NGK3 116 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 CD69Q07108 199 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 NIT1Q86X76 327 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 POLR3KQ9Y2Y1 108 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-201ENST00000249837 LINC01560Q8TB33 94 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 ZNF414Q96IQ9 312 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 IGHV3OR16-10A0A075B7F0 116 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 GFRA3O60609 400 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 ZNF883P0CG24 379 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 HBBP68871 147 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 TMEM30BQ3MIR4 351 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 Q6ZR03 302 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 CACNG8Q8WXS5 425 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-201ENST00000249837 BTF3P20290 206 aaKnown RBP3.79□□□□□ -1.8
VPS13C-201ENST00000249837 LGALS7P47929 136 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 FOXL1Q12952 345 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 UNQ5815/PRO19632Q6UWF5 114 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 OSR1Q8TAX0 266 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-201ENST00000249837 TMEM70Q9BUB7 260 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 KLK15Q9H2R5 256 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 Q9H3A6 140 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 UBTD1Q9HAC8 227 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 FOXA2Q9Y261 457 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-201ENST00000249837 IGKV1D-17A0A075B6S4 117 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 A0A1B0GUT8 65 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 SH2D7A6NKC9 451 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-201ENST00000249837 GCSHP23434 173 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 ASCL5Q7RTU5 278 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 EXOC3-AS1Q8N2X6 119 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 OR10AG1Q8NH19 301 aa3.79□□□□□ -1.8
VPS13C-201ENST00000249837 DMRTC2Q8IXT2 367 aaPredicted RBP3.79□□□□□ -1.8
VPS13C-201ENST00000249837 MTORP42345 2549 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms