RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 AKR1C4P17516 323 aa13.25□□□□□ -0.29
PTPN11-207ENST00000639857 BMI1P35226 326 aa13.25□□□□□ -0.29
PTPN11-207ENST00000639857 SUPT4H1P63272 117 aaKnown RBP13.25□□□□□ -0.29
PTPN11-207ENST00000639857 TMEM128Q5BJH2 165 aa13.25□□□□□ -0.29
PTPN11-207ENST00000639857 ZNF600Q6ZNG1 722 aa13.25□□□□□ -0.29
PTPN11-207ENST00000639857 LGI3Q8N145 548 aa13.25□□□□□ -0.29
PTPN11-207ENST00000639857 MUC7Q8TAX7 377 aa13.25□□□□□ -0.29
PTPN11-207ENST00000639857 FAM110AQ9BQ89 295 aa13.25□□□□□ -0.29
PTPN11-207ENST00000639857 SMPXQ9UHP9 88 aa13.25□□□□□ -0.29
PTPN11-207ENST00000639857 IGHV7-4-1A0A0J9YVY3 117 aa13.24□□□□□ -0.29
PTPN11-207ENST00000639857 RPS10-NUDT3A0A1W2PQS6 291 aa13.24□□□□□ -0.29
PTPN11-207ENST00000639857 RBMY1BA6NDE4 496 aaKnown RBP13.24□□□□□ -0.29
PTPN11-207ENST00000639857 RBMY1EA6NEQ0 496 aaKnown RBP13.24□□□□□ -0.29
PTPN11-207ENST00000639857 RBMY1DP0C7P1 496 aaKnown RBP13.24□□□□□ -0.29
PTPN11-207ENST00000639857 OPRK1P41145 380 aa13.24□□□□□ -0.29
PTPN11-207ENST00000639857 CCR6P51684 374 aa13.24□□□□□ -0.29
PTPN11-207ENST00000639857 C2orf83Q53S99 150 aa13.24□□□□□ -0.29
PTPN11-207ENST00000639857 NMSQ5H8A3 153 aa13.24□□□□□ -0.29
PTPN11-207ENST00000639857 NOXA1Q86UR1 476 aa13.24□□□□□ -0.29
PTPN11-207ENST00000639857 TMEM116Q8NCL8 245 aa13.24□□□□□ -0.29
PTPN11-207ENST00000639857 OR4X1Q8NH49 305 aa13.24□□□□□ -0.29
PTPN11-207ENST00000639857 RNASEH2CQ8TDP1 164 aaKnown RBP13.24□□□□□ -0.29
PTPN11-207ENST00000639857 WFDC10AQ9H1F0 79 aa13.24□□□□□ -0.29
PTPN11-207ENST00000639857 HEYLQ9NQ87 328 aaPredicted RBP13.24□□□□□ -0.29
PTPN11-207ENST00000639857 TRAV14DV4A0A0A6YYC5 116 aa13.23□□□□□ -0.29
PTPN11-207ENST00000639857 OR4C46A6NHA9 309 aa13.23□□□□□ -0.29
PTPN11-207ENST00000639857 CLN5O75503 358 aa13.23□□□□□ -0.29
PTPN11-207ENST00000639857 YIF1AO95070 293 aa13.23□□□□□ -0.29
PTPN11-207ENST00000639857 TMEM50AO95807 157 aa13.23□□□□□ -0.29
PTPN11-207ENST00000639857 IGHV3-48P01763 117 aa13.23□□□□□ -0.29
PTPN11-207ENST00000639857 SMCO1Q147U7 214 aa13.23□□□□□ -0.29
PTPN11-207ENST00000639857 SLC24A4Q8NFF2 622 aa13.23□□□□□ -0.29
PTPN11-207ENST00000639857 SRRQ9GZT4 340 aa13.23□□□□□ -0.29
PTPN11-207ENST00000639857 HIPK2Q9H2X6 1198 aa13.23□□□□□ -0.29
PTPN11-207ENST00000639857 FNDC4Q9H6D8 234 aaPredicted RBP13.23□□□□□ -0.29
PTPN11-207ENST00000639857 IGHV3OR16-8A0A075B7F1 116 aa13.22□□□□□ -0.29
PTPN11-207ENST00000639857 TRAV30A0A087WSZ9 112 aa13.22□□□□□ -0.29
PTPN11-207ENST00000639857 CEBPZOSA8MTT3 80 aa13.22□□□□□ -0.29
PTPN11-207ENST00000639857 CHEK1O14757 476 aa13.22□□□□□ -0.29
PTPN11-207ENST00000639857 SLC25A4P12235 298 aa13.22□□□□□ -0.29
PTPN11-207ENST00000639857 RHPN1-AS1Q9BWJ2 59 aa13.22□□□□□ -0.29
PTPN11-207ENST00000639857 EDA2RQ9HAV5 297 aa13.22□□□□□ -0.29
PTPN11-207ENST00000639857 NDUFA13Q9P0J0 144 aa13.22□□□□□ -0.29
PTPN11-207ENST00000639857 HSPB7Q9UBY9 170 aa13.22□□□□□ -0.29
PTPN11-207ENST00000639857 SELENOKQ9Y6D0 94 aa13.22□□□□□ -0.29
PTPN11-207ENST00000639857 A0A1B0GU03 582 aa13.21□□□□□ -0.29
PTPN11-207ENST00000639857 ZNF207O43670 478 aaKnown RBP13.21□□□□□ -0.29
PTPN11-207ENST00000639857 ATP5IP56385 69 aaPredicted RBP13.21□□□□□ -0.29
PTPN11-207ENST00000639857 TNFRSF9Q07011 255 aa13.21□□□□□ -0.29
PTPN11-207ENST00000639857 ETFRF1Q6IPR1 90 aa13.21□□□□□ -0.29
PTPN11-207ENST00000639857 TOMM20LQ6UXN7 152 aa13.21□□□□□ -0.29
PTPN11-207ENST00000639857 TMED4Q7Z7H5 227 aa13.21□□□□□ -0.29
PTPN11-207ENST00000639857 LRTM2Q8N967 370 aa13.21□□□□□ -0.29
PTPN11-207ENST00000639857 GGTLC1Q9BX51 225 aa13.21□□□□□ -0.29
PTPN11-207ENST00000639857 ZFAND3Q9H8U3 227 aa13.21□□□□□ -0.29
PTPN11-207ENST00000639857 LOC102724200A0A096LPH7 203 aaPredicted RBP13.2□□□□□ -0.3
PTPN11-207ENST00000639857 NAP1L6A6NFF2 107 aa13.2□□□□□ -0.3
PTPN11-207ENST00000639857 SLC25A6P12236 298 aa13.2□□□□□ -0.3
PTPN11-207ENST00000639857 NPY1RP25929 384 aa13.2□□□□□ -0.3
PTPN11-207ENST00000639857 CMC4P56277 68 aaPredicted RBP13.2□□□□□ -0.3
PTPN11-207ENST00000639857 UBE2MP61081 183 aaKnown RBP13.2□□□□□ -0.3
PTPN11-207ENST00000639857 RBMS2Q15434 407 aaKnown RBP13.2□□□□□ -0.3
PTPN11-207ENST00000639857 LYZL2Q7Z4W2 148 aa13.2□□□□□ -0.3
PTPN11-207ENST00000639857 RNF2Q99496 336 aa13.2□□□□□ -0.3
PTPN11-207ENST00000639857 TMEM231Q9H6L2 316 aa13.2□□□□□ -0.3
PTPN11-207ENST00000639857 VSIRQ9H7M9 311 aa13.2□□□□□ -0.3
PTPN11-207ENST00000639857 PRR13Q9NZ81 148 aa13.2□□□□□ -0.3
PTPN11-207ENST00000639857 PUS1Q9Y606 427 aaKnown RBP eCLIP13.2□□□□□ -0.3
PTPN11-207ENST00000639857 U3KQ87 197 aa13.2□□□□□ -0.3
PTPN11-207ENST00000639857 INPP1P49441 399 aa13.19□□□□□ -0.3
PTPN11-207ENST00000639857 TRIQKQ629K1 86 aa13.19□□□□□ -0.3
PTPN11-207ENST00000639857 FAM90A2PQ658T7 463 aa13.19□□□□□ -0.3
PTPN11-207ENST00000639857 MRPL36Q9P0J6 103 aaKnown RBP13.19□□□□□ -0.3
PTPN11-207ENST00000639857 VAMP1P23763 118 aa13.18□□□□□ -0.3
PTPN11-207ENST00000639857 ODF3L2Q3SX64 289 aa13.18□□□□□ -0.3
PTPN11-207ENST00000639857 CENPSQ8N2Z9 138 aa13.18□□□□□ -0.3
PTPN11-207ENST00000639857 OR1S2Q8NGQ3 325 aa13.18□□□□□ -0.3
PTPN11-207ENST00000639857 DTD1Q8TEA8 209 aa13.18□□□□□ -0.3
PTPN11-207ENST00000639857 TMED3Q9Y3Q3 217 aa13.18□□□□□ -0.3
PTPN11-207ENST00000639857 KMT2CQ8NEZ4 4911 aaKnown RBP13.17□□□□□ -0.3
PTPN11-207ENST00000639857 TRAV2A0A0B4J234 112 aa13.17□□□□□ -0.3
PTPN11-207ENST00000639857 A0A1W2PS18 150 aa13.17□□□□□ -0.3
PTPN11-207ENST00000639857 FAM90A26D6RGX4 464 aa13.17□□□□□ -0.3
PTPN11-207ENST00000639857 PITX3O75364 302 aa13.17□□□□□ -0.3
PTPN11-207ENST00000639857 IGKV1-17P01599 117 aa13.17□□□□□ -0.3
PTPN11-207ENST00000639857 LYL1P12980 280 aa13.17□□□□□ -0.3
PTPN11-207ENST00000639857 APOC4P55056 127 aa13.17□□□□□ -0.3
PTPN11-207ENST00000639857 PAFAH1B2P68402 229 aa13.17□□□□□ -0.3
PTPN11-207ENST00000639857 CASC10Q5T4H9 136 aa13.17□□□□□ -0.3
PTPN11-207ENST00000639857 PRSS54Q6PEW0 395 aa13.17□□□□□ -0.3
PTPN11-207ENST00000639857 OR1S1Q8NH92 325 aa13.17□□□□□ -0.3
PTPN11-207ENST00000639857 TMEM170AQ8WVE7 144 aa13.17□□□□□ -0.3
PTPN11-207ENST00000639857 METTL26Q96S19 204 aa13.17□□□□□ -0.3
PTPN11-207ENST00000639857 KIR2DL5BA0A0G2JN68 375 aa13.16□□□□□ -0.3
PTPN11-207ENST00000639857 KIR2DL5BA0A0G2JPC4 375 aa13.16□□□□□ -0.3
PTPN11-207ENST00000639857 SFT2D2O95562 160 aa13.16□□□□□ -0.3
PTPN11-207ENST00000639857 IFNA10P01566 189 aa13.16□□□□□ -0.3
PTPN11-207ENST00000639857 IGLC1P0CG04 106 aa13.16□□□□□ -0.3
PTPN11-207ENST00000639857 NPPCP23582 126 aa13.16□□□□□ -0.3
PTPN11-207ENST00000639857 RND2P52198 227 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms