RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 TNFRSF14Q92956 283 aa16.43■□□□□ 0.22
CACNA1A-257ENST00000638009 IFI27L1Q96BM0 104 aa16.43■□□□□ 0.22
CACNA1A-257ENST00000638009 TNFRSF12AQ9NP84 129 aa16.43■□□□□ 0.22
CACNA1A-257ENST00000638009 NUP210Q8TEM1 1887 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-257ENST00000638009 C21orf62Q9NYP8 219 aa16.43■□□□□ 0.22
CACNA1A-257ENST00000638009 SOCS3O14543 225 aa16.43■□□□□ 0.22
CACNA1A-257ENST00000638009 NPIPB3Q92617 1050 aa16.43■□□□□ 0.22
CACNA1A-257ENST00000638009 COL9A1P20849 921 aa16.43■□□□□ 0.22
CACNA1A-257ENST00000638009 IGKV3D-20A0A0C4DH25 116 aa16.43■□□□□ 0.22
CACNA1A-257ENST00000638009 ZG16O60844 167 aa16.43■□□□□ 0.22
CACNA1A-257ENST00000638009 ST6GALNAC6Q969X2 333 aa16.43■□□□□ 0.22
CACNA1A-257ENST00000638009 KLF4O43474 513 aa16.43■□□□□ 0.22
CACNA1A-257ENST00000638009 OR9G9P0C7N8 305 aa16.42■□□□□ 0.22
CACNA1A-257ENST00000638009 PPP1R3EQ9H7J1 279 aa16.42■□□□□ 0.22
CACNA1A-257ENST00000638009 GAGE12BA1L429 117 aa16.42■□□□□ 0.22
CACNA1A-257ENST00000638009 NPIPB13A6NJU9 1138 aa16.42■□□□□ 0.22
CACNA1A-257ENST00000638009 IFITM1P13164 125 aa16.42■□□□□ 0.22
CACNA1A-257ENST00000638009 SERF1AO75920 110 aa16.42■□□□□ 0.22
CACNA1A-257ENST00000638009 DSCR8Q96T75 97 aa16.42■□□□□ 0.22
CACNA1A-257ENST00000638009 SNHG12Q9BXW3 62 aa16.42■□□□□ 0.22
CACNA1A-257ENST00000638009 SLC25A48Q6ZT89 311 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-257ENST00000638009 TMEM242Q9NWH2 141 aa16.42■□□□□ 0.22
CACNA1A-257ENST00000638009 SELLP14151 372 aa16.42■□□□□ 0.22
CACNA1A-257ENST00000638009 PAPPAQ13219 1627 aa16.42■□□□□ 0.22
CACNA1A-257ENST00000638009 TCTEX1D4Q5JR98 221 aa16.42■□□□□ 0.22
CACNA1A-257ENST00000638009 GAGE2AQ6NT46 116 aa16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 A0A1W2PPE3 182 aa16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 SNRPCP09234 159 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 CCL20P78556 96 aa16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 FAM90A2PQ658T7 463 aa16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 PPP1R27Q86WC6 154 aa16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 OSTCQ9NRP0 149 aa16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 DLK2Q6UY11 383 aa16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 GTSF1LQ9H1H1 148 aa16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 IGKV1D-42A0A075B6H8 117 aa16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 IQCF6A8MYZ5 107 aa16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 KIAA0040Q15053 153 aa16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 SFTA2Q6UW10 78 aa16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 NEGR1Q7Z3B1 354 aa16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 MAFAQ8NHW3 353 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 WNT2BQ93097 391 aa16.41■□□□□ 0.22
CACNA1A-257ENST00000638009 CEACAM8P31997 349 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-257ENST00000638009 TEX43Q6ZNM6 134 aa16.4■□□□□ 0.22
CACNA1A-257ENST00000638009 RASL10AQ92737 203 aa16.4■□□□□ 0.22
CACNA1A-257ENST00000638009 UBE2CO00762 179 aa16.4■□□□□ 0.22
CACNA1A-257ENST00000638009 PVRIGQ6DKI7 326 aa16.4■□□□□ 0.22
CACNA1A-257ENST00000638009 SHISA4Q96DD7 197 aa16.4■□□□□ 0.22
CACNA1A-257ENST00000638009 COX14Q96I36 57 aa16.4■□□□□ 0.22
CACNA1A-257ENST00000638009 PSCAO43653 123 aa16.4■□□□□ 0.22
CACNA1A-257ENST00000638009 CGAP01215 116 aa16.4■□□□□ 0.22
CACNA1A-257ENST00000638009 ZIC4Q8N9L1 334 aa16.39■□□□□ 0.21
CACNA1A-257ENST00000638009 CHCHD5Q9BSY4 110 aa16.39■□□□□ 0.21
CACNA1A-257ENST00000638009 DLL3Q9NYJ7 618 aa16.39■□□□□ 0.21
CACNA1A-257ENST00000638009 MYMXA0A1B0GTQ4 84 aa16.39■□□□□ 0.21
CACNA1A-257ENST00000638009 HLA-DQB1P01920 261 aa16.39■□□□□ 0.21
CACNA1A-257ENST00000638009 FAM90A1Q86YD7 464 aa16.39■□□□□ 0.21
CACNA1A-257ENST00000638009 UBE2DNLQ8IWF7 75 aa16.39■□□□□ 0.21
CACNA1A-257ENST00000638009 LINC01555Q8NAE3 123 aa16.39■□□□□ 0.21
CACNA1A-257ENST00000638009 ZNF703Q9H7S9 590 aaPredicted RBP16.39■□□□□ 0.21
CACNA1A-257ENST00000638009 C3AR1Q16581 482 aa16.39■□□□□ 0.21
CACNA1A-257ENST00000638009 Q96M66 194 aa16.39■□□□□ 0.21
CACNA1A-257ENST00000638009 PILRBQ9UKJ0 227 aa16.39■□□□□ 0.21
CACNA1A-257ENST00000638009 WBP1LQ9NX94 342 aa16.38■□□□□ 0.21
CACNA1A-257ENST00000638009 LHX2P50458 406 aa16.38■□□□□ 0.21
CACNA1A-257ENST00000638009 C1orf100Q5SVJ3 147 aa16.38■□□□□ 0.21
CACNA1A-257ENST00000638009 PKIGQ9Y2B9 76 aa16.38■□□□□ 0.21
CACNA1A-257ENST00000638009 GTF3AQ92664 365 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-257ENST00000638009 ADAMTS9Q9P2N4 1935 aa16.38■□□□□ 0.21
CACNA1A-257ENST00000638009 IGHV3-72A0A0B4J1Y9 119 aa16.38■□□□□ 0.21
CACNA1A-257ENST00000638009 LY75O60449 1722 aa16.38■□□□□ 0.21
CACNA1A-257ENST00000638009 IFI6P09912 130 aa16.38■□□□□ 0.21
CACNA1A-257ENST00000638009 MGAMO43451 1857 aa16.38■□□□□ 0.21
CACNA1A-257ENST00000638009 SCO2A0A1W2PP80 73 aa16.38■□□□□ 0.21
CACNA1A-257ENST00000638009 ZNRF1Q8ND25 227 aa16.38■□□□□ 0.21
CACNA1A-257ENST00000638009 ERCC8Q13216 396 aa16.37■□□□□ 0.21
CACNA1A-257ENST00000638009 MSRB3Q8IXL7 192 aa16.37■□□□□ 0.21
CACNA1A-257ENST00000638009 UCN2Q96RP3 112 aa16.37■□□□□ 0.21
CACNA1A-257ENST00000638009 FOXA2Q9Y261 457 aaPredicted RBP16.37■□□□□ 0.21
CACNA1A-257ENST00000638009 TRBV5-5A0A0J9YX44 114 aa16.37■□□□□ 0.21
CACNA1A-257ENST00000638009 TNFSF13O75888 250 aa16.37■□□□□ 0.21
CACNA1A-257ENST00000638009 IFI27L2Q9H2X8 130 aa16.37■□□□□ 0.21
CACNA1A-257ENST00000638009 EGR4Q05215 589 aa16.37■□□□□ 0.21
CACNA1A-257ENST00000638009 TRAV41A0A0B4J266 112 aa16.37■□□□□ 0.21
CACNA1A-257ENST00000638009 TMEM187Q14656 261 aa16.37■□□□□ 0.21
CACNA1A-257ENST00000638009 UTF1Q5T230 341 aa16.37■□□□□ 0.21
CACNA1A-257ENST00000638009 HCSTQ9UBK5 93 aa16.37■□□□□ 0.21
CACNA1A-257ENST00000638009 TPTE2P1Q5T6R2 138 aa16.37■□□□□ 0.21
CACNA1A-257ENST00000638009 DEFB124Q8NES8 71 aa16.37■□□□□ 0.21
CACNA1A-257ENST00000638009 PRTN3P24158 256 aa16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 UBE2V1Q13404 147 aa16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 DPM3Q9P2X0 92 aa16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 NEUROG3Q9Y4Z2 214 aa16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 GZMBP10144 247 aa16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 H2BFSP57053 126 aa16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 KLF17Q5JT82 389 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 ITLN1Q8WWA0 313 aa16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 TTTY12Q9BZ98 90 aa16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 PRSS41Q7RTY9 318 aa16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 PTPRBP23467 1997 aa16.36■□□□□ 0.21
CACNA1A-257ENST00000638009 IGHV1-69-2A0A0G2JMI3 117 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms