RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ZFAND1Q8TCF1 268 aa9.92□□□□□ -0.82
SNX1-214ENST00000625244 SCGB3A2Q96PL1 93 aa9.92□□□□□ -0.82
SNX1-214ENST00000625244 AIFM2Q9BRQ8 373 aa9.92□□□□□ -0.82
SNX1-214ENST00000625244 C20orf24Q9BUV8 137 aa9.92□□□□□ -0.82
SNX1-214ENST00000625244 SRRQ9GZT4 340 aa9.92□□□□□ -0.82
SNX1-214ENST00000625244 FXYD6Q9H0Q3 95 aa9.92□□□□□ -0.82
SNX1-214ENST00000625244 DHFRP00374 187 aa9.91□□□□□ -0.82
SNX1-214ENST00000625244 ZNF735P0CB33 412 aa9.91□□□□□ -0.82
SNX1-214ENST00000625244 DEFA4P12838 97 aa9.91□□□□□ -0.82
SNX1-214ENST00000625244 GNRHRP30968 328 aa9.91□□□□□ -0.82
SNX1-214ENST00000625244 RPL27AP46776 148 aaKnown RBP9.91□□□□□ -0.82
SNX1-214ENST00000625244 PPP5CP53041 499 aa9.91□□□□□ -0.82
SNX1-214ENST00000625244 OR2B11Q5JQS5 317 aa9.91□□□□□ -0.82
SNX1-214ENST00000625244 Q5VSD8 79 aa9.91□□□□□ -0.82
SNX1-214ENST00000625244 VKORC1L1Q8N0U8 176 aa9.91□□□□□ -0.82
SNX1-214ENST00000625244 GBGT1Q8N5D6 347 aa9.91□□□□□ -0.82
SNX1-214ENST00000625244 CCDC71LQ8N9Z2 235 aa9.91□□□□□ -0.82
SNX1-214ENST00000625244 OR4D10Q8NGI6 311 aa9.91□□□□□ -0.82
SNX1-214ENST00000625244 OR51H1Q8NH63 302 aa9.91□□□□□ -0.82
SNX1-214ENST00000625244 ZNF486Q96H40 463 aaPredicted RBP9.91□□□□□ -0.82
SNX1-214ENST00000625244 C14orf166Q9Y224 244 aaKnown RBP9.91□□□□□ -0.82
SNX1-214ENST00000625244 OR2T8A6NH00 312 aa9.9□□□□□ -0.82
SNX1-214ENST00000625244 CENPXA8MT69 81 aa9.9□□□□□ -0.82
SNX1-214ENST00000625244 HRASP01112 189 aa9.9□□□□□ -0.82
SNX1-214ENST00000625244 IGLV2-14P01704 120 aa9.9□□□□□ -0.82
SNX1-214ENST00000625244 RLN1P04808 185 aa9.9□□□□□ -0.82
SNX1-214ENST00000625244 PHLDA2Q53GA4 152 aa9.9□□□□□ -0.82
SNX1-214ENST00000625244 FAAP20Q6NZ36 180 aa9.9□□□□□ -0.82
SNX1-214ENST00000625244 TRIM63Q969Q1 353 aa9.9□□□□□ -0.82
SNX1-214ENST00000625244 WDR12Q9GZL7 423 aaKnown RBP9.9□□□□□ -0.82
SNX1-214ENST00000625244 COPZ2Q9P299 210 aa9.9□□□□□ -0.82
SNX1-214ENST00000625244 SMPXQ9UHP9 88 aa9.9□□□□□ -0.82
SNX1-214ENST00000625244 K7EMT4 169 aa9.89□□□□□ -0.83
SNX1-214ENST00000625244 CHEK1O14757 476 aa9.89□□□□□ -0.83
SNX1-214ENST00000625244 PGLYRP1O75594 196 aaPredicted RBP9.89□□□□□ -0.83
SNX1-214ENST00000625244 C4BPBP20851 252 aa9.89□□□□□ -0.83
SNX1-214ENST00000625244 NPY1RP25929 384 aa9.89□□□□□ -0.83
SNX1-214ENST00000625244 DEFB131AP59861 70 aa9.89□□□□□ -0.83
SNX1-214ENST00000625244 RPL30P62888 115 aaKnown RBP9.89□□□□□ -0.83
SNX1-214ENST00000625244 KLF9Q13886 244 aaPredicted RBP9.89□□□□□ -0.83
SNX1-214ENST00000625244 SURF2Q15527 256 aaPredicted RBP9.89□□□□□ -0.83
SNX1-214ENST00000625244 LHFPL1Q86WI0 220 aa9.89□□□□□ -0.83
SNX1-214ENST00000625244 SPAG16Q8N0X2 631 aa9.89□□□□□ -0.83
SNX1-214ENST00000625244 OR51S1Q8NGJ8 323 aa9.89□□□□□ -0.83
SNX1-214ENST00000625244 VSTM2AQ8TAG5 236 aa9.89□□□□□ -0.83
SNX1-214ENST00000625244 OR2A7Q96R45 310 aa9.89□□□□□ -0.83
SNX1-214ENST00000625244 CCDC32Q9BV29 185 aa9.89□□□□□ -0.83
SNX1-214ENST00000625244 RHPN1-AS1Q9BWJ2 59 aa9.89□□□□□ -0.83
SNX1-214ENST00000625244 CLEC5AQ9NY25 188 aa9.89□□□□□ -0.83
SNX1-214ENST00000625244 TBC1D24Q9ULP9 559 aa9.89□□□□□ -0.83
SNX1-214ENST00000625244 RNF213Q63HN8 5207 aa9.88□□□□□ -0.83
SNX1-214ENST00000625244 IGHV3-49A0A0A0MS15 119 aa9.88□□□□□ -0.83
SNX1-214ENST00000625244 NAP1L6A6NFF2 107 aa9.88□□□□□ -0.83
SNX1-214ENST00000625244 NDUFA4O00483 81 aa9.88□□□□□ -0.83
SNX1-214ENST00000625244 RBFOX2O43251 390 aaKnown RBP eCLIP9.88□□□□□ -0.83
SNX1-214ENST00000625244 PIGPP57054 158 aa9.88□□□□□ -0.83
SNX1-214ENST00000625244 ERVK-16P61578 105 aa9.88□□□□□ -0.83
SNX1-214ENST00000625244 ZNF846Q147U1 533 aa9.88□□□□□ -0.83
SNX1-214ENST00000625244 FAM90A2PQ658T7 463 aa9.88□□□□□ -0.83
SNX1-214ENST00000625244 MORN3Q6PF18 240 aaPredicted RBP9.88□□□□□ -0.83
SNX1-214ENST00000625244 STHQ8IWL8 128 aa9.88□□□□□ -0.83
SNX1-214ENST00000625244 LYPD1Q8N2G4 141 aa9.88□□□□□ -0.83
SNX1-214ENST00000625244 OR13C8Q8NGS7 320 aa9.88□□□□□ -0.83
SNX1-214ENST00000625244 MARCH1Q8TCQ1 289 aa9.88□□□□□ -0.83
SNX1-214ENST00000625244 HRASLSQ9HDD0 168 aa9.88□□□□□ -0.83
SNX1-214ENST00000625244 NBDYA0A0U1RRE5 68 aa9.87□□□□□ -0.83
SNX1-214ENST00000625244 F8W735 103 aaPredicted RBP9.87□□□□□ -0.83
SNX1-214ENST00000625244 J3QL48 77 aa9.87□□□□□ -0.83
SNX1-214ENST00000625244 KBTBD11O94819 623 aa9.87□□□□□ -0.83
SNX1-214ENST00000625244 HPRT1P00492 218 aa9.87□□□□□ -0.83
SNX1-214ENST00000625244 IL7P13232 177 aa9.87□□□□□ -0.83
SNX1-214ENST00000625244 F2RP25116 425 aa9.87□□□□□ -0.83
SNX1-214ENST00000625244 RND3P61587 244 aa9.87□□□□□ -0.83
SNX1-214ENST00000625244 EIF4EBP1Q13541 118 aaPredicted RBP9.87□□□□□ -0.83
SNX1-214ENST00000625244 BAK1Q16611 211 aa9.87□□□□□ -0.83
SNX1-214ENST00000625244 TBC1D26Q86UD7 250 aa9.87□□□□□ -0.83
SNX1-214ENST00000625244 FAM24BQ8N5W8 94 aa9.87□□□□□ -0.83
SNX1-214ENST00000625244 CSNK1G2-AS1Q8NCQ2 148 aa9.87□□□□□ -0.83
SNX1-214ENST00000625244 FAM210BQ96KR6 192 aa9.87□□□□□ -0.83
SNX1-214ENST00000625244 GPHA2Q96T91 129 aa9.87□□□□□ -0.83
SNX1-214ENST00000625244 C7orf50Q9BRJ6 194 aaKnown RBP9.87□□□□□ -0.83
SNX1-214ENST00000625244 IGHV7-4-1A0A0J9YVY3 117 aa9.86□□□□□ -0.83
SNX1-214ENST00000625244 TEX13DA0A0J9YY54 714 aaPredicted RBP9.86□□□□□ -0.83
SNX1-214ENST00000625244 LINC00854A0A1B0GVQ3 168 aa9.86□□□□□ -0.83
SNX1-214ENST00000625244 CGB1A6NKQ9 187 aa9.86□□□□□ -0.83
SNX1-214ENST00000625244 C15orf62A8K5M9 175 aa9.86□□□□□ -0.83
SNX1-214ENST00000625244 B3GALNT1O75752 331 aa9.86□□□□□ -0.83
SNX1-214ENST00000625244 ATG12O94817 140 aa9.86□□□□□ -0.83
SNX1-214ENST00000625244 SERPINE2P07093 398 aa9.86□□□□□ -0.83
SNX1-214ENST00000625244 NQO2P16083 231 aa9.86□□□□□ -0.83
SNX1-214ENST00000625244 PI3P19957 117 aa9.86□□□□□ -0.83
SNX1-214ENST00000625244 XGP55808 180 aa9.86□□□□□ -0.83
SNX1-214ENST00000625244 TAS2R31P59538 309 aa9.86□□□□□ -0.83
SNX1-214ENST00000625244 TMEM41BQ5BJD5 291 aa9.86□□□□□ -0.83
SNX1-214ENST00000625244 TRPT1Q86TN4 253 aaKnown RBP9.86□□□□□ -0.83
SNX1-214ENST00000625244 DMBX1Q8NFW5 382 aa9.86□□□□□ -0.83
SNX1-214ENST00000625244 TMEM167AQ8TBQ9 72 aa9.86□□□□□ -0.83
SNX1-214ENST00000625244 BSCL2Q96G97 398 aaPredicted RBP9.86□□□□□ -0.83
SNX1-214ENST00000625244 ZNF414Q96IQ9 312 aa9.86□□□□□ -0.83
SNX1-214ENST00000625244 SLC25A21Q9BQT8 299 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms