RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 CLN5O75503 358 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 CD74P04233 296 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 OPRK1P41145 380 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 HTR2BP41595 481 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 SPCS3P61009 180 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 TMEM187Q14656 261 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 SURF2Q15527 256 aaPredicted RBP8.76□□□□□ -1.01
UPF3B-204ENST00000619445 NOXA1Q86UR1 476 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 GBGT1Q8N5D6 347 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 OR11H2Q8NH07 326 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 OR4X1Q8NH49 305 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 OR52I2Q8NH67 350 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 C11orf45Q8TAV5 145 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 ST8SIA2Q92186 375 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 ZNF414Q96IQ9 312 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 TP53RKQ96S44 253 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 ABHD1Q96SE0 405 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 MS4A6AQ9H2W1 248 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 ZFAND3Q9H8U3 227 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 EXTL2Q9UBQ6 330 aa8.76□□□□□ -1.01
UPF3B-204ENST00000619445 C14orf166Q9Y224 244 aaKnown RBP8.76□□□□□ -1.01
UPF3B-204ENST00000619445 GABARAPH6UMI1 98 aa8.75□□□□□ -1.01
UPF3B-204ENST00000619445 GABARAPO95166 117 aa8.75□□□□□ -1.01
UPF3B-204ENST00000619445 RAB3DO95716 219 aa8.75□□□□□ -1.01
UPF3B-204ENST00000619445 CA1P00915 261 aaPredicted RBP8.75□□□□□ -1.01
UPF3B-204ENST00000619445 IGHV3-48P01763 117 aa8.75□□□□□ -1.01
UPF3B-204ENST00000619445 RNASE2P10153 161 aaKnown RBP8.75□□□□□ -1.01
UPF3B-204ENST00000619445 AP2S1P53680 142 aaPredicted RBP8.75□□□□□ -1.01
UPF3B-204ENST00000619445 EWSR1Q01844 656 aaKnown RBP eCLIP8.75□□□□□ -1.01
UPF3B-204ENST00000619445 RBMS2Q15434 407 aaKnown RBP8.75□□□□□ -1.01
UPF3B-204ENST00000619445 AARDQ4LEZ3 155 aa8.75□□□□□ -1.01
UPF3B-204ENST00000619445 LGALS9CQ6DKI2 356 aa8.75□□□□□ -1.01
UPF3B-204ENST00000619445 MORN3Q6PF18 240 aaPredicted RBP8.75□□□□□ -1.01
UPF3B-204ENST00000619445 STHQ8IWL8 128 aa8.75□□□□□ -1.01
UPF3B-204ENST00000619445 CENPSQ8N2Z9 138 aa8.75□□□□□ -1.01
UPF3B-204ENST00000619445 TMEM230Q96A57 120 aa8.75□□□□□ -1.01
UPF3B-204ENST00000619445 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.75□□□□□ -1.01
UPF3B-204ENST00000619445 IGHV3OR16-13A0A075B7E8 117 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 IGHV3-74A0A0B4J1X5 117 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 PIGBOS1A0A0B4J2F0 54 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 HELTA6NFD8 242 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 CDS2O95674 445 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 SPP1P10451 314 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 SLC25A4P12235 298 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 PI3P19957 117 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 CRYBB3P26998 211 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 ETV6P41212 452 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 PPP5CP53041 499 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 DEFB131AP59861 70 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 DHODHQ02127 395 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 BSXQ3C1V8 233 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 SCGB2B2Q4G0G5 96 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 SPINK9Q5DT21 86 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 ETFRF1Q6IPR1 90 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 STEAP1BQ6NZ63 245 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 OR13C8Q8NGS7 320 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 RNASEH2CQ8TDP1 164 aaKnown RBP8.74□□□□□ -1.01
UPF3B-204ENST00000619445 RBPMSQ93062 196 aaKnown RBP8.74□□□□□ -1.01
UPF3B-204ENST00000619445 TMEM222Q9H0R3 208 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 RABAC1Q9UI14 185 aa8.74□□□□□ -1.01
UPF3B-204ENST00000619445 TEX13DA0A0J9YY54 714 aaPredicted RBP8.73□□□□□ -1.01
UPF3B-204ENST00000619445 DISC1C4P0D8 188 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 C11orf94C9JXX5 98 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 CTF1Q16619 201 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 IZUMO4Q1ZYL8 232 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 GPR107Q5VW38 600 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 OR1S2Q8NGQ3 325 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 Q8WTZ3 238 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 KRTAP3-3Q9BYR6 98 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 KRTAP3-2Q9BYR7 98 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 HRH4Q9H3N8 390 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 HEYLQ9NQ87 328 aaPredicted RBP8.73□□□□□ -1.01
UPF3B-204ENST00000619445 A0A1B0GU03 582 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 RGS5O15539 181 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 GSTZ1O43708 216 aaPredicted RBP8.73□□□□□ -1.01
UPF3B-204ENST00000619445 NUP62P37198 522 aaPredicted RBP8.73□□□□□ -1.01
UPF3B-204ENST00000619445 P2RY1P47900 373 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 ZNF124Q15973 351 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 C2orf83Q53S99 150 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 RNASE12Q5GAN4 147 aaKnown RBP8.73□□□□□ -1.01
UPF3B-204ENST00000619445 STXBP6Q8NFX7 210 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 MARCH1Q8TCQ1 289 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 C2CD4CQ8TF44 421 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 SCGB3A2Q96PL1 93 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 PRRT1Q99946 306 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 NAA60Q9H7X0 242 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 SEPSECSQ9HD40 501 aaKnown RBP8.73□□□□□ -1.01
UPF3B-204ENST00000619445 PFDN2Q9UHV9 154 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 KCNIP3Q9Y2W7 256 aa8.73□□□□□ -1.01
UPF3B-204ENST00000619445 K7EQG2 157 aa8.72□□□□□ -1.01
UPF3B-204ENST00000619445 APOHP02749 345 aaPredicted RBP8.72□□□□□ -1.01
UPF3B-204ENST00000619445 MIFP14174 115 aa8.72□□□□□ -1.01
UPF3B-204ENST00000619445 YPEL3P61236 119 aaPredicted RBP8.72□□□□□ -1.01
UPF3B-204ENST00000619445 NUTF2P61970 127 aaKnown RBP8.72□□□□□ -1.01
UPF3B-204ENST00000619445 SP6Q3SY56 376 aa8.72□□□□□ -1.01
UPF3B-204ENST00000619445 LEMD1Q68G75 181 aa8.72□□□□□ -1.01
UPF3B-204ENST00000619445 GLYATL2Q8WU03 294 aa8.72□□□□□ -1.01
UPF3B-204ENST00000619445 SMIM4Q8WVI0 70 aa8.72□□□□□ -1.01
UPF3B-204ENST00000619445 IL22RA2Q969J5 263 aa8.72□□□□□ -1.01
UPF3B-204ENST00000619445 FNDC4Q9H6D8 234 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms