RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 SPSB3Q6PJ21 355 aa3.42□□□□□ -1.86
CUL3-216ENST00000617432 BTNL8Q6UX41 500 aa3.42□□□□□ -1.86
CUL3-216ENST00000617432 LHFPL1Q86WI0 220 aa3.42□□□□□ -1.86
CUL3-216ENST00000617432 FAM223AQ8IWN6 122 aa3.42□□□□□ -1.86
CUL3-216ENST00000617432 DEFB125Q8N687 156 aa3.42□□□□□ -1.86
CUL3-216ENST00000617432 NECAP1Q8NC96 275 aa3.42□□□□□ -1.86
CUL3-216ENST00000617432 TMEM116Q8NCL8 245 aa3.42□□□□□ -1.86
CUL3-216ENST00000617432 DGCR14Q96DF8 476 aaKnown RBP3.42□□□□□ -1.86
CUL3-216ENST00000617432 USMG5Q96IX5 58 aa3.42□□□□□ -1.86
CUL3-216ENST00000617432 TMEM68Q96MH6 324 aa3.42□□□□□ -1.86
CUL3-216ENST00000617432 RCHY1Q96PM5 261 aa3.42□□□□□ -1.86
CUL3-216ENST00000617432 TP53RKQ96S44 253 aa3.42□□□□□ -1.86
CUL3-216ENST00000617432 SPIN2AQ99865 258 aa3.42□□□□□ -1.86
CUL3-216ENST00000617432 SPIN2BQ9BPZ2 258 aa3.42□□□□□ -1.86
CUL3-216ENST00000617432 MRPS26Q9BYN8 205 aaKnown RBP3.42□□□□□ -1.86
CUL3-216ENST00000617432 MLXQ9UH92 298 aa3.42□□□□□ -1.86
CUL3-216ENST00000617432 STRAPQ9Y3F4 350 aaKnown RBP3.42□□□□□ -1.86
CUL3-216ENST00000617432 CHTOPQ9Y3Y2 248 aaKnown RBP3.42□□□□□ -1.86
CUL3-216ENST00000617432 IGHV3-49A0A0A0MS15 119 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 RBMY1BA6NDE4 496 aaKnown RBP3.41□□□□□ -1.86
CUL3-216ENST00000617432 RBMY1EA6NEQ0 496 aaKnown RBP3.41□□□□□ -1.86
CUL3-216ENST00000617432 OR2T8A6NH00 312 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 K7EIM0 57 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 RHODO00212 210 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 RBFOX2O43251 390 aaKnown RBP eCLIP3.41□□□□□ -1.86
CUL3-216ENST00000617432 CREBL2O60519 120 aaPredicted RBP3.41□□□□□ -1.86
CUL3-216ENST00000617432 RBMY1DP0C7P1 496 aaKnown RBP3.41□□□□□ -1.86
CUL3-216ENST00000617432 OR13C7P0DN81 318 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 FOLR2P14207 255 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 PGAM2P15259 253 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 ZNF182P17025 639 aaPredicted RBP3.41□□□□□ -1.86
CUL3-216ENST00000617432 F2RP25116 425 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 MAS1LP35410 378 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 TAS2R46P59540 309 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 CD81P60033 236 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 TSPAN5P62079 268 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 GAMTQ14353 236 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 KLK9Q2XQG4 91 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 DEFB114Q30KQ6 69 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 ZFAND6Q6FIF0 208 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 GPR141Q7Z602 305 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 CROCCP3Q8IVE0 287 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 TMEM61Q8N0U2 210 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 UBAC2Q8NBM4 344 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 OR13C8Q8NGS7 320 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 OR6F1Q8NGZ6 308 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 OR4A5Q8NH83 315 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 LHFPL5Q8TAF8 219 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 VSTM2AQ8TAG5 236 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 ZNF502Q8TBZ5 544 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 MARCH1Q8TCQ1 289 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 DYNC2LI1Q8TCX1 351 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 DYNLRB2Q8TF09 96 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 EEF1AKMT3Q96AZ1 226 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 SEC22AQ96IW7 307 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 CHRDL1Q9BU40 450 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 SLC25A32Q9H2D1 315 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 SCPEP1Q9HB40 452 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 NDUFA4L2Q9NRX3 87 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 COMMD9Q9P000 198 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 MRPL36Q9P0J6 103 aaKnown RBP3.41□□□□□ -1.86
CUL3-216ENST00000617432 KLK9Q9UKQ9 250 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 OR51B2Q9Y5P1 312 aa3.41□□□□□ -1.86
CUL3-216ENST00000617432 STARD9Q9P2P6 4700 aa3.4□□□□□ -1.86
CUL3-216ENST00000617432 IGHV3OR16-13A0A075B7E8 117 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 IGHV3-74A0A0B4J1X5 117 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 XKRY2A2RUG3 117 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 C15orf61A6NNL5 157 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 H3BMQ9 156 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 RGS5O15539 181 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 TGOLN2O43493 480 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 GGCTO75223 188 aaKnown RBP3.4□□□□□ -1.87
CUL3-216ENST00000617432 SERPINE2P07093 398 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 PRSS2P07478 247 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 P0C879 139 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 TRAPPC2P0DI81 140 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 TRAPPC2BP0DI82 140 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 DEFA4P12838 97 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 CBLN1P23435 193 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 PIGPP57054 158 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 ERVK-16P61578 105 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 GUCA2BQ16661 112 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 HAGHQ16775 308 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 SCGB2B2Q4G0G5 96 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 RNASE10Q5GAN6 216 aaKnown RBP3.4□□□□□ -1.87
CUL3-216ENST00000617432 RBPMS2Q6ZRY4 209 aaKnown RBP3.4□□□□□ -1.87
CUL3-216ENST00000617432 SLC25A42Q86VD7 318 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 GDPD1Q8N9F7 314 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 NHLRC2Q8NBF2 726 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 UXS1Q8NBZ7 420 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 OR4C16Q8NGL9 310 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 LSM10Q969L4 123 aaKnown RBP3.4□□□□□ -1.87
CUL3-216ENST00000617432 ISOC1Q96CN7 298 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 NEURL2Q9BR09 285 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 TM2D3Q9BRN9 247 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 COMMD5Q9GZQ3 224 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 SLIRPQ9GZT3 109 aaKnown RBP3.4□□□□□ -1.87
CUL3-216ENST00000617432 EDA2RQ9HAV5 297 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 TMEM14BQ9NUH8 114 aa3.4□□□□□ -1.87
CUL3-216ENST00000617432 MTFP1Q9UDX5 166 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms