RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 NXPH3O95157 252 aa16.67■□□□□ 0.26
GTF2F1-204ENST00000594965 SULT1A3P0DMM9 295 aa16.67■□□□□ 0.26
GTF2F1-204ENST00000594965 SULT1A4P0DMN0 295 aa16.67■□□□□ 0.26
GTF2F1-204ENST00000594965 NPBWR1P48145 328 aa16.67■□□□□ 0.26
GTF2F1-204ENST00000594965 SPANXN2Q5MJ10 180 aa16.67■□□□□ 0.26
GTF2F1-204ENST00000594965 DEDD2Q8WXF8 326 aa16.67■□□□□ 0.26
GTF2F1-204ENST00000594965 SHPKQ9UHJ6 478 aa16.67■□□□□ 0.26
GTF2F1-204ENST00000594965 CHEK1O14757 476 aa16.66■□□□□ 0.26
GTF2F1-204ENST00000594965 YIF1AO95070 293 aa16.66■□□□□ 0.26
GTF2F1-204ENST00000594965 HTR2BP41595 481 aa16.66■□□□□ 0.26
GTF2F1-204ENST00000594965 BAK1Q16611 211 aa16.66■□□□□ 0.26
GTF2F1-204ENST00000594965 ANKRD55Q3KP44 614 aa16.66■□□□□ 0.26
GTF2F1-204ENST00000594965 TOMM20LQ6UXN7 152 aa16.66■□□□□ 0.26
GTF2F1-204ENST00000594965 TMED4Q7Z7H5 227 aa16.66■□□□□ 0.26
GTF2F1-204ENST00000594965 LGI3Q8N145 548 aa16.66■□□□□ 0.26
GTF2F1-204ENST00000594965 TMEM170AQ8WVE7 144 aa16.66■□□□□ 0.26
GTF2F1-204ENST00000594965 SDHCQ99643 169 aaPredicted RBP16.66■□□□□ 0.26
GTF2F1-204ENST00000594965 SPAG8Q99932 426 aaPredicted RBP16.66■□□□□ 0.26
GTF2F1-204ENST00000594965 ZFAND3Q9H8U3 227 aa16.66■□□□□ 0.26
GTF2F1-204ENST00000594965 HEYLQ9NQ87 328 aaPredicted RBP16.66■□□□□ 0.26
GTF2F1-204ENST00000594965 DNAH7Q8WXX0 4024 aa16.66■□□□□ 0.26
GTF2F1-204ENST00000594965 IGHV3-49A0A0A0MS15 119 aa16.65■□□□□ 0.26
GTF2F1-204ENST00000594965 CEBPZOSA8MTT3 80 aa16.65■□□□□ 0.26
GTF2F1-204ENST00000594965 OPRK1P41145 380 aa16.65■□□□□ 0.26
GTF2F1-204ENST00000594965 C2orf83Q53S99 150 aa16.65■□□□□ 0.26
GTF2F1-204ENST00000594965 TMEM128Q5BJH2 165 aa16.65■□□□□ 0.26
GTF2F1-204ENST00000594965 TMEM116Q8NCL8 245 aa16.65■□□□□ 0.26
GTF2F1-204ENST00000594965 OR4X1Q8NH49 305 aa16.65■□□□□ 0.26
GTF2F1-204ENST00000594965 CITED4Q96RK1 184 aa16.65■□□□□ 0.26
GTF2F1-204ENST00000594965 RNF2Q99496 336 aa16.65■□□□□ 0.26
GTF2F1-204ENST00000594965 SLC25A21Q9BQT8 299 aaPredicted RBP16.65■□□□□ 0.26
GTF2F1-204ENST00000594965 HIPK2Q9H2X6 1198 aa16.65■□□□□ 0.26
GTF2F1-204ENST00000594965 RETNQ9HD89 108 aa16.65■□□□□ 0.26
GTF2F1-204ENST00000594965 A0A1B0GU03 582 aa16.64■□□□□ 0.25
GTF2F1-204ENST00000594965 CLN5O75503 358 aa16.64■□□□□ 0.25
GTF2F1-204ENST00000594965 ANXA3P12429 323 aa16.64■□□□□ 0.25
GTF2F1-204ENST00000594965 CCR6P51684 374 aa16.64■□□□□ 0.25
GTF2F1-204ENST00000594965 LAMTOR1Q6IAA8 161 aa16.64■□□□□ 0.25
GTF2F1-204ENST00000594965 ZNF600Q6ZNG1 722 aa16.64■□□□□ 0.25
GTF2F1-204ENST00000594965 SLC24A4Q8NFF2 622 aa16.64■□□□□ 0.25
GTF2F1-204ENST00000594965 RHPN1-AS1Q9BWJ2 59 aa16.64■□□□□ 0.25
GTF2F1-204ENST00000594965 EDA2RQ9HAV5 297 aa16.64■□□□□ 0.25
GTF2F1-204ENST00000594965 TRAV14DV4A0A0A6YYC5 116 aa16.63■□□□□ 0.25
GTF2F1-204ENST00000594965 SRPXP78539 464 aa16.63■□□□□ 0.25
GTF2F1-204ENST00000594965 TNFRSF9Q07011 255 aa16.63■□□□□ 0.25
GTF2F1-204ENST00000594965 SMCO1Q147U7 214 aa16.63■□□□□ 0.25
GTF2F1-204ENST00000594965 HSPB7Q9UBY9 170 aa16.63■□□□□ 0.25
GTF2F1-204ENST00000594965 PUS1Q9Y606 427 aaKnown RBP eCLIP16.63■□□□□ 0.25
GTF2F1-204ENST00000594965 IGHV3OR16-13A0A075B7E8 117 aa16.62■□□□□ 0.25
GTF2F1-204ENST00000594965 IGHV3-74A0A0B4J1X5 117 aa16.62■□□□□ 0.25
GTF2F1-204ENST00000594965 FAM90A2PQ658T7 463 aa16.62■□□□□ 0.25
GTF2F1-204ENST00000594965 RBKSQ9H477 322 aa16.62■□□□□ 0.25
GTF2F1-204ENST00000594965 UBQLN2Q9UHD9 624 aa16.62■□□□□ 0.25
GTF2F1-204ENST00000594965 C3orf84H3BNL1 204 aa16.61■□□□□ 0.25
GTF2F1-204ENST00000594965 APOHP02749 345 aaPredicted RBP16.61■□□□□ 0.25
GTF2F1-204ENST00000594965 PPP1R1AQ13522 171 aa16.61■□□□□ 0.25
GTF2F1-204ENST00000594965 ODF3L2Q3SX64 289 aa16.61■□□□□ 0.25
GTF2F1-204ENST00000594965 PRSS54Q6PEW0 395 aa16.61■□□□□ 0.25
GTF2F1-204ENST00000594965 LRTM2Q8N967 370 aa16.61■□□□□ 0.25
GTF2F1-204ENST00000594965 MUC7Q8TAX7 377 aa16.61■□□□□ 0.25
GTF2F1-204ENST00000594965 CACFD1Q9UGQ2 172 aa16.61■□□□□ 0.25
GTF2F1-204ENST00000594965 KMT2CQ8NEZ4 4911 aaKnown RBP16.6■□□□□ 0.25
GTF2F1-204ENST00000594965 DUXBA0A1W2PPF3 345 aa16.6■□□□□ 0.25
GTF2F1-204ENST00000594965 PITX3O75364 302 aa16.6■□□□□ 0.25
GTF2F1-204ENST00000594965 SFT2D2O95562 160 aa16.6■□□□□ 0.25
GTF2F1-204ENST00000594965 IGKV1-17P01599 117 aa16.6■□□□□ 0.25
GTF2F1-204ENST00000594965 TIGITQ495A1 244 aa16.6■□□□□ 0.25
GTF2F1-204ENST00000594965 LILRB2Q8N423 598 aa16.6■□□□□ 0.25
GTF2F1-204ENST00000594965 RNASEH2CQ8TDP1 164 aaKnown RBP16.6■□□□□ 0.25
GTF2F1-204ENST00000594965 ST8SIA2Q92186 375 aa16.6■□□□□ 0.25
GTF2F1-204ENST00000594965 GINS3Q9BRX5 216 aa16.6■□□□□ 0.25
GTF2F1-204ENST00000594965 VSIRQ9H7M9 311 aa16.6■□□□□ 0.25
GTF2F1-204ENST00000594965 NDUFA13Q9P0J0 144 aa16.6■□□□□ 0.25
GTF2F1-204ENST00000594965 RPS10-NUDT3A0A1W2PQS6 291 aa16.59■□□□□ 0.25
GTF2F1-204ENST00000594965 VAMP1P23763 118 aa16.59■□□□□ 0.25
GTF2F1-204ENST00000594965 NPY1RP25929 384 aa16.59■□□□□ 0.25
GTF2F1-204ENST00000594965 RBMS2Q15434 407 aaKnown RBP16.59■□□□□ 0.25
GTF2F1-204ENST00000594965 CENPSQ8N2Z9 138 aa16.59■□□□□ 0.25
GTF2F1-204ENST00000594965 DTD1Q8TEA8 209 aa16.59■□□□□ 0.25
GTF2F1-204ENST00000594965 FAM110AQ9BQ89 295 aa16.59■□□□□ 0.25
GTF2F1-204ENST00000594965 LOC102724200A0A096LPH7 203 aaPredicted RBP16.58■□□□□ 0.24
GTF2F1-204ENST00000594965 TRIQKQ629K1 86 aa16.58■□□□□ 0.24
GTF2F1-204ENST00000594965 OR1S1Q8NH92 325 aa16.58■□□□□ 0.24
GTF2F1-204ENST00000594965 GGTLC1Q9BX51 225 aa16.58■□□□□ 0.24
GTF2F1-204ENST00000594965 TRAV30A0A087WSZ9 112 aa16.57■□□□□ 0.24
GTF2F1-204ENST00000594965 NAP1L6A6NFF2 107 aa16.57■□□□□ 0.24
GTF2F1-204ENST00000594965 OR4C46A6NHA9 309 aa16.57■□□□□ 0.24
GTF2F1-204ENST00000594965 IGLC1P0CG04 106 aa16.57■□□□□ 0.24
GTF2F1-204ENST00000594965 SLC25A4P12235 298 aa16.57■□□□□ 0.24
GTF2F1-204ENST00000594965 BTCP35070 178 aa16.57■□□□□ 0.24
GTF2F1-204ENST00000594965 RND2P52198 227 aa16.57■□□□□ 0.24
GTF2F1-204ENST00000594965 U3KQ87 197 aa16.57■□□□□ 0.24
GTF2F1-204ENST00000594965 PIGBOS1A0A0B4J2F0 54 aa16.56■□□□□ 0.24
GTF2F1-204ENST00000594965 IGHV3-66A0A0C4DH42 116 aa16.56■□□□□ 0.24
GTF2F1-204ENST00000594965 NDUFB6O95139 128 aa16.56■□□□□ 0.24
GTF2F1-204ENST00000594965 IFNA10P01566 189 aa16.56■□□□□ 0.24
GTF2F1-204ENST00000594965 INPP1P49441 399 aa16.56■□□□□ 0.24
GTF2F1-204ENST00000594965 CASC10Q5T4H9 136 aa16.56■□□□□ 0.24
GTF2F1-204ENST00000594965 TCF24Q7RTU0 167 aa16.56■□□□□ 0.24
GTF2F1-204ENST00000594965 FLVCR2Q9UPI3 526 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms