RNA–Protein interactions for RNA: ENST00000594087.1

CCDC61-202, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC61, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-202ENST00000594087 GINS3Q9BRX5 216 aa13.32□□□□□ -0.28
CCDC61-202ENST00000594087 HIPK2Q9H2X6 1198 aa13.32□□□□□ -0.28
CCDC61-202ENST00000594087 NAP1L6A6NFF2 107 aa13.31□□□□□ -0.28
CCDC61-202ENST00000594087 CEBPZOSA8MTT3 80 aa13.31□□□□□ -0.28
CCDC61-202ENST00000594087 TSPAN4O14817 238 aa13.31□□□□□ -0.28
CCDC61-202ENST00000594087 SCAF4O95104 1147 aaKnown RBP13.31□□□□□ -0.28
CCDC61-202ENST00000594087 BMI1P35226 326 aa13.31□□□□□ -0.28
CCDC61-202ENST00000594087 SMCO1Q147U7 214 aa13.31□□□□□ -0.28
CCDC61-202ENST00000594087 TRIQKQ629K1 86 aa13.31□□□□□ -0.28
CCDC61-202ENST00000594087 RNASEH2CQ8TDP1 164 aaKnown RBP13.31□□□□□ -0.28
CCDC61-202ENST00000594087 TRAV30A0A087WSZ9 112 aa13.3□□□□□ -0.28
CCDC61-202ENST00000594087 IGHV3-48P01763 117 aa13.3□□□□□ -0.28
CCDC61-202ENST00000594087 CD5P06127 495 aa13.3□□□□□ -0.28
CCDC61-202ENST00000594087 RBMS2Q15434 407 aaKnown RBP13.3□□□□□ -0.28
CCDC61-202ENST00000594087 HAGHQ16775 308 aa13.3□□□□□ -0.28
CCDC61-202ENST00000594087 C2orf83Q53S99 150 aa13.3□□□□□ -0.28
CCDC61-202ENST00000594087 NMSQ5H8A3 153 aa13.3□□□□□ -0.28
CCDC61-202ENST00000594087 ZNF600Q6ZNG1 722 aa13.3□□□□□ -0.28
CCDC61-202ENST00000594087 SLC24A4Q8NFF2 622 aa13.3□□□□□ -0.28
CCDC61-202ENST00000594087 OR4X1Q8NH49 305 aa13.3□□□□□ -0.28
CCDC61-202ENST00000594087 SMPXQ9UHP9 88 aa13.3□□□□□ -0.28
CCDC61-202ENST00000594087 TRAV14DV4A0A0A6YYC5 116 aa13.29□□□□□ -0.28
CCDC61-202ENST00000594087 A0A1B0GU03 582 aa13.29□□□□□ -0.28
CCDC61-202ENST00000594087 CENPXA8MT69 81 aa13.29□□□□□ -0.28
CCDC61-202ENST00000594087 CLN5O75503 358 aa13.29□□□□□ -0.28
CCDC61-202ENST00000594087 TMEM50AO95807 157 aa13.29□□□□□ -0.28
CCDC61-202ENST00000594087 VAMP1P23763 118 aa13.29□□□□□ -0.28
CCDC61-202ENST00000594087 ATP5IP56385 69 aaPredicted RBP13.29□□□□□ -0.28
CCDC61-202ENST00000594087 UBE2MP61081 183 aaKnown RBP13.29□□□□□ -0.28
CCDC61-202ENST00000594087 ETFRF1Q6IPR1 90 aa13.29□□□□□ -0.28
CCDC61-202ENST00000594087 LINC00322Q6ZN03 302 aaPredicted RBP13.29□□□□□ -0.28
CCDC61-202ENST00000594087 LYZL2Q7Z4W2 148 aa13.29□□□□□ -0.28
CCDC61-202ENST00000594087 DEFB125Q8N687 156 aa13.29□□□□□ -0.28
CCDC61-202ENST00000594087 LRTM2Q8N967 370 aa13.29□□□□□ -0.28
CCDC61-202ENST00000594087 TMEM116Q8NCL8 245 aa13.29□□□□□ -0.28
CCDC61-202ENST00000594087 HSPB7Q9UBY9 170 aa13.29□□□□□ -0.28
CCDC61-202ENST00000594087 U3KQ87 197 aa13.29□□□□□ -0.28
CCDC61-202ENST00000594087 IGHV7-4-1A0A0J9YVY3 117 aa13.28□□□□□ -0.28
CCDC61-202ENST00000594087 OR4C46A6NHA9 309 aa13.28□□□□□ -0.28
CCDC61-202ENST00000594087 SLC25A4P12235 298 aa13.28□□□□□ -0.28
CCDC61-202ENST00000594087 TNFRSF9Q07011 255 aa13.28□□□□□ -0.28
CCDC61-202ENST00000594087 CENPSQ8N2Z9 138 aa13.28□□□□□ -0.28
CCDC61-202ENST00000594087 SRD5A3Q9H8P0 318 aa13.28□□□□□ -0.28
CCDC61-202ENST00000594087 PRR13Q9NZ81 148 aa13.28□□□□□ -0.28
CCDC61-202ENST00000594087 IGHV3OR16-8A0A075B7F1 116 aa13.27□□□□□ -0.29
CCDC61-202ENST00000594087 SLC25A6P12236 298 aa13.27□□□□□ -0.29
CCDC61-202ENST00000594087 NPY1RP25929 384 aa13.27□□□□□ -0.29
CCDC61-202ENST00000594087 TOMM20LQ6UXN7 152 aa13.27□□□□□ -0.29
CCDC61-202ENST00000594087 FAM110AQ9BQ89 295 aa13.27□□□□□ -0.29
CCDC61-202ENST00000594087 C7orf50Q9BRJ6 194 aaKnown RBP13.27□□□□□ -0.29
CCDC61-202ENST00000594087 RHPN1-AS1Q9BWJ2 59 aa13.27□□□□□ -0.29
CCDC61-202ENST00000594087 FNDC4Q9H6D8 234 aaPredicted RBP13.27□□□□□ -0.29
CCDC61-202ENST00000594087 TMED3Q9Y3Q3 217 aa13.27□□□□□ -0.29
CCDC61-202ENST00000594087 PUS1Q9Y606 427 aaKnown RBP eCLIP13.27□□□□□ -0.29
CCDC61-202ENST00000594087 SELENOKQ9Y6D0 94 aa13.27□□□□□ -0.29
CCDC61-202ENST00000594087 TENM3Q9P273 2699 aa13.26□□□□□ -0.29
CCDC61-202ENST00000594087 C3orf84H3BNL1 204 aa13.26□□□□□ -0.29
CCDC61-202ENST00000594087 CHEK1O14757 476 aa13.26□□□□□ -0.29
CCDC61-202ENST00000594087 ZNF207O43670 478 aaKnown RBP13.26□□□□□ -0.29
CCDC61-202ENST00000594087 SFT2D2O95562 160 aa13.26□□□□□ -0.29
CCDC61-202ENST00000594087 CMC4P56277 68 aaPredicted RBP13.26□□□□□ -0.29
CCDC61-202ENST00000594087 BAK1Q16611 211 aa13.26□□□□□ -0.29
CCDC61-202ENST00000594087 OR1S1Q8NH92 325 aa13.26□□□□□ -0.29
CCDC61-202ENST00000594087 DTD1Q8TEA8 209 aa13.26□□□□□ -0.29
CCDC61-202ENST00000594087 TMEM231Q9H6L2 316 aa13.26□□□□□ -0.29
CCDC61-202ENST00000594087 STAB2Q8WWQ8 2551 aa13.26□□□□□ -0.29
CCDC61-202ENST00000594087 FAM90A26D6RGX4 464 aa13.25□□□□□ -0.29
CCDC61-202ENST00000594087 IFNA10P01566 189 aa13.25□□□□□ -0.29
CCDC61-202ENST00000594087 PAFAH1B2P68402 229 aa13.25□□□□□ -0.29
CCDC61-202ENST00000594087 CNPY1Q3B7I2 92 aa13.25□□□□□ -0.29
CCDC61-202ENST00000594087 ZNF414Q96IQ9 312 aa13.25□□□□□ -0.29
CCDC61-202ENST00000594087 CITED4Q96RK1 184 aa13.25□□□□□ -0.29
CCDC61-202ENST00000594087 RNF2Q99496 336 aa13.25□□□□□ -0.29
CCDC61-202ENST00000594087 A0A1W2PS18 150 aa13.24□□□□□ -0.29
CCDC61-202ENST00000594087 RBMY1BA6NDE4 496 aaKnown RBP13.24□□□□□ -0.29
CCDC61-202ENST00000594087 RBMY1EA6NEQ0 496 aaKnown RBP13.24□□□□□ -0.29
CCDC61-202ENST00000594087 NDUFB6O95139 128 aa13.24□□□□□ -0.29
CCDC61-202ENST00000594087 RBMY1DP0C7P1 496 aaKnown RBP13.24□□□□□ -0.29
CCDC61-202ENST00000594087 PPP1R1AQ13522 171 aa13.24□□□□□ -0.29
CCDC61-202ENST00000594087 OR1S2Q8NGQ3 325 aa13.24□□□□□ -0.29
CCDC61-202ENST00000594087 NARS2Q96I59 477 aaKnown RBP13.24□□□□□ -0.29
CCDC61-202ENST00000594087 WFDC10AQ9H1F0 79 aa13.24□□□□□ -0.29
CCDC61-202ENST00000594087 ZFAND3Q9H8U3 227 aa13.24□□□□□ -0.29
CCDC61-202ENST00000594087 HUWE1Q7Z6Z7 4374 aaKnown RBP13.24□□□□□ -0.29
CCDC61-202ENST00000594087 LOC102724200A0A096LPH7 203 aaPredicted RBP13.23□□□□□ -0.29
CCDC61-202ENST00000594087 PITX3O75364 302 aa13.23□□□□□ -0.29
CCDC61-202ENST00000594087 MED6O75586 246 aa13.23□□□□□ -0.29
CCDC61-202ENST00000594087 NXPH3O95157 252 aa13.23□□□□□ -0.29
CCDC61-202ENST00000594087 NPPCP23582 126 aa13.23□□□□□ -0.29
CCDC61-202ENST00000594087 MLANAQ16655 118 aa13.23□□□□□ -0.29
CCDC61-202ENST00000594087 PRSS54Q6PEW0 395 aa13.23□□□□□ -0.29
CCDC61-202ENST00000594087 LINC00299Q6ZSB3 139 aa13.23□□□□□ -0.29
CCDC61-202ENST00000594087 METTL26Q96S19 204 aa13.23□□□□□ -0.29
CCDC61-202ENST00000594087 GGTLC1Q9BX51 225 aa13.23□□□□□ -0.29
CCDC61-202ENST00000594087 RBKSQ9H477 322 aa13.23□□□□□ -0.29
CCDC61-202ENST00000594087 VSIRQ9H7M9 311 aa13.23□□□□□ -0.29
CCDC61-202ENST00000594087 IL7P13232 177 aa13.22□□□□□ -0.29
CCDC61-202ENST00000594087 RND2P52198 227 aa13.22□□□□□ -0.29
CCDC61-202ENST00000594087 YPEL3P61236 119 aaPredicted RBP13.22□□□□□ -0.29
CCDC61-202ENST00000594087 MUC7Q8TAX7 377 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms