RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 GAL3ST2Q9H3Q3 398 aa3.56□□□□□ -1.84
ERCC1-216ENST00000592444 CHMP1AQ9HD42 196 aaPredicted RBP3.56□□□□□ -1.84
ERCC1-216ENST00000592444 RANGRFQ9HD47 186 aaPredicted RBP3.56□□□□□ -1.84
ERCC1-216ENST00000592444 COA4Q9NYJ1 87 aa3.56□□□□□ -1.84
ERCC1-216ENST00000592444 NACAE9PAV3 2078 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 TEX13DA0A0J9YY54 714 aaPredicted RBP3.55□□□□□ -1.84
ERCC1-216ENST00000592444 C3orf85A0A1B0GTC6 90 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 BUB1B-PAK6H3BSN5 160 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 CCSO14618 274 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 SLC22A5O76082 557 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 S1PR2O95136 353 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 NDUFA3O95167 84 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 DHFRP00374 187 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 C1QBP02746 253 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 MT1HL1P0DM35 61 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 RPA2P15927 270 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 RAB7AP51149 207 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 RAB9AP51151 201 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 PAX9P55771 341 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 HERV-K104P61576 105 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 SUMO1P63165 101 aaKnown RBP3.55□□□□□ -1.84
ERCC1-216ENST00000592444 HNF4GQ14541 408 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 KLK9Q2XQG4 91 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 SP6Q3SY56 376 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 GGNBP1Q5YKI7 109 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 LIN54Q6MZP7 749 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 Q6ZTC4 211 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 LYZL2Q7Z4W2 148 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 TMED4Q7Z7H5 227 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 FAM219AQ8IW50 185 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 PRR18Q8N4B5 295 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 C9orf62Q8N4C0 152 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 ZNF565Q8N9K5 539 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 RBPMSQ93062 196 aaKnown RBP3.55□□□□□ -1.84
ERCC1-216ENST00000592444 PPP1R14BQ96C90 147 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 FLYWCH2Q96CP2 140 aaKnown RBP3.55□□□□□ -1.84
ERCC1-216ENST00000592444 HSD17B10Q99714 261 aaKnown RBP3.55□□□□□ -1.84
ERCC1-216ENST00000592444 CLEC7AQ9BXN2 247 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 NMES1Q9C002 83 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 ZNF436Q9C0F3 470 aaPredicted RBP3.55□□□□□ -1.84
ERCC1-216ENST00000592444 C11orf68Q9H3H3 251 aaKnown RBP3.55□□□□□ -1.84
ERCC1-216ENST00000592444 PLEKHA2Q9HB19 425 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 PLSCR3Q9NRY6 295 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 ZNF355PQ9NSJ1 428 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 TMEM14BQ9NUH8 114 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 LIN7CQ9NUP9 197 aaKnown RBP3.55□□□□□ -1.84
ERCC1-216ENST00000592444 KCNIP1Q9NZI2 227 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 COMMD9Q9P000 198 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 DPM3Q9P2X0 92 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 GNG12Q9UBI6 72 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 KLK9Q9UKQ9 250 aa3.55□□□□□ -1.84
ERCC1-216ENST00000592444 TRAV3A0A0B4J244 114 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 IGHV1-3A0A0C4DH29 117 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 NBDYA0A0U1RRE5 68 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 MARCH11A6NNE9 402 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 PMS2P5A8MQ11 134 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 INS-IGF2F8WCM5 200 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 SMLR1H3BR10 107 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 HSD17B6O14756 317 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 RAB29O14966 203 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 TNFSF12O43508 249 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 SIX6O95475 246 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 IFNA5P01569 189 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 IGHV3-7P01780 117 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 MBPP02686 304 aaPredicted RBP3.54□□□□□ -1.84
ERCC1-216ENST00000592444 HSPB1P04792 205 aaKnown RBP3.54□□□□□ -1.84
ERCC1-216ENST00000592444 CSN3P07498 182 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 LGALS1P09382 135 aaKnown RBP3.54□□□□□ -1.84
ERCC1-216ENST00000592444 OR9G9P0C7N8 305 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 ANXA3P12429 323 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 TMEM11P17152 192 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 AKR1C4P17516 323 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 HLA-DMBP28068 263 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 KIR2DS2P43631 304 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 INPP1P49441 399 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 GNG10P50151 68 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 APOC4P55056 127 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 RAP2BP61225 183 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 TSPAN5P62079 268 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 MRPS15P82914 257 aaKnown RBP3.54□□□□□ -1.84
ERCC1-216ENST00000592444 NDPQ00604 133 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 IFITM2Q01629 132 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 GUCA2BQ16661 112 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 IZUMO4Q1ZYL8 232 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 TPTE2P1Q5T6R2 138 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 AKAP14Q86UN6 197 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 ABHD12Q8N2K0 398 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 CCDC71LQ8N9Z2 235 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 ZBTB8BQ8NAP8 495 aaPredicted RBP3.54□□□□□ -1.84
ERCC1-216ENST00000592444 OR9G4Q8NGQ1 327 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 OR51H1Q8NH63 302 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 PPP1R1CQ8WVI7 109 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 RITA1Q96K30 269 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 SCGB3A2Q96PL1 93 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 PHB2Q99623 299 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 RARRES2Q99969 163 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 SCRT1Q9BWW7 348 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 RAB9BQ9NP90 201 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 HSPB7Q9UBY9 170 aa3.54□□□□□ -1.84
ERCC1-216ENST00000592444 RNF150Q9ULK6 438 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms