RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 RABL2AQ9UBK7 228 aaPredicted RBP5.66□□□□□ -1.5
VMP1-213ENST00000591877 PEF1Q9UBV8 284 aaKnown RBP5.66□□□□□ -1.5
VMP1-213ENST00000591877 RABL2BQ9UNT1 228 aa5.66□□□□□ -1.5
VMP1-213ENST00000591877 PRELID3BQ9Y3B1 194 aa5.66□□□□□ -1.5
VMP1-213ENST00000591877 A0A0A6YYH2 397 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 MEIS3P1A6NDR6 274 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 A6NJ64 397 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 FAM25AB3EWG3 89 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 FAM25CB3EWG5 89 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 FAM25GB3EWG6 89 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 BMPR1BO00238 502 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 TNFSF12O43508 249 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 DFFBO76075 338 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 OR2A4O95047 310 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 APOA1P02647 267 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 SYNJ2BPP57105 145 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 DEFA1P59665 94 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 DEFA3P59666 94 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 RHOGP84095 191 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 IFITM3Q01628 133 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 OXA1LQ15070 435 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 ADAMTSL5Q6ZMM2 481 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 OR9G4Q8NGQ1 327 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 TMEM167AQ8TBQ9 72 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 TCTEX1D2Q8WW35 142 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 ZNF479Q96JC4 524 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 OR2A7Q96R45 310 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 SDHCQ99643 169 aaPredicted RBP5.65□□□□□ -1.5
VMP1-213ENST00000591877 C5orf66Q9H5L9 145 aa5.65□□□□□ -1.5
VMP1-213ENST00000591877 MRPS7Q9Y2R9 242 aaKnown RBP5.65□□□□□ -1.5
VMP1-213ENST00000591877 HUWE1Q7Z6Z7 4374 aaKnown RBP5.64□□□□□ -1.51
VMP1-213ENST00000591877 IGLV9-49A0A0B4J1Y8 123 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 TRAV3A0A0B4J244 114 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 IZUMO1RA6ND01 250 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 OR2J3O76001 311 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 KBTBD11O94819 623 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 PTTG1O95997 202 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 PPYP01298 95 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 ZNF735P0CB33 412 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 ELK1P19419 428 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 ARPC4P59998 168 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 EXOSC2Q13868 293 aaKnown RBP5.64□□□□□ -1.51
VMP1-213ENST00000591877 MSMO1Q15800 293 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 KLK9Q2XQG4 91 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 TRIM16LQ309B1 348 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 UBE2NLQ5JXB2 153 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 SSX9Q7RTT3 188 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 CENPSQ8N2Z9 138 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 SAMD12Q8N8I0 201 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 OR5AP2Q8NGF4 316 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 OR4S2Q8NH73 311 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 GIMAP1Q8WWP7 306 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 ST6GAL2Q96JF0 529 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 SPIN2AQ99865 258 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 SPIN2BQ9BPZ2 258 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 DIABLOQ9NR28 239 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 SLC2A9Q9NRM0 540 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 SIGLEC8Q9NYZ4 499 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 EXTL2Q9UBQ6 330 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 KLK9Q9UKQ9 250 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 ANAPC10Q9UM13 185 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 RYR3Q15413 4870 aa5.64□□□□□ -1.51
VMP1-213ENST00000591877 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.63□□□□□ -1.51
VMP1-213ENST00000591877 FAM223BA6NKX1 122 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 PPP5D1E7EU14 171 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 SULT1C2O00338 296 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 RBFOX2O43251 390 aaKnown RBP eCLIP5.63□□□□□ -1.51
VMP1-213ENST00000591877 CREBL2O60519 120 aaPredicted RBP5.63□□□□□ -1.51
VMP1-213ENST00000591877 CDK2AP2O75956 126 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 HLA-AP01891 365 aaKnown RBP5.63□□□□□ -1.51
VMP1-213ENST00000591877 EIF4EP06730 217 aaKnown RBP5.63□□□□□ -1.51
VMP1-213ENST00000591877 CRYGCP07315 174 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 IL7P13232 177 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 CTRB1P17538 263 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 GNRHRP30968 328 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 MAS1LP35410 378 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 RPL27AP46776 148 aaKnown RBP5.63□□□□□ -1.51
VMP1-213ENST00000591877 CAMLGP49069 296 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 CNN1P51911 297 aaKnown RBP5.63□□□□□ -1.51
VMP1-213ENST00000591877 FXYD4P59646 89 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 ATP5G2Q06055 141 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 IL18Q14116 193 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 C15orf32Q32M92 178 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 PYDC2Q56P42 97 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 TRIQKQ629K1 86 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 CTRB2Q6GPI1 263 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 ZNF818PQ6ZRF7 136 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 COX8CQ7Z4L0 72 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 SNX29P2Q8IUI4 249 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 FAM223AQ8IWN6 122 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 SPAG16Q8N0X2 631 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 NECAP1Q8NC96 275 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 VSTM2AQ8TAG5 236 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 RCHY1Q96PM5 261 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 GPN1Q9HCN4 374 aaPredicted RBP5.63□□□□□ -1.51
VMP1-213ENST00000591877 BET1LQ9NYM9 111 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 ZNF257Q9Y2Q1 563 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 S4R3C0 116 aa5.63□□□□□ -1.51
VMP1-213ENST00000591877 A0A1B0GVG6 124 aa5.62□□□□□ -1.51
VMP1-213ENST00000591877 PRAC2D3DTV9 90 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms