RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 RBPMS2Q6ZRY4 209 aaKnown RBP11.18□□□□□ -0.62
ATG4D-207ENST00000587256 C7orf50Q9BRJ6 194 aaKnown RBP11.18□□□□□ -0.62
ATG4D-207ENST00000587256 A0A1B0GU03 582 aa11.17□□□□□ -0.62
ATG4D-207ENST00000587256 RPS10-NUDT3A0A1W2PQS6 291 aa11.17□□□□□ -0.62
ATG4D-207ENST00000587256 SCAF4O95104 1147 aaKnown RBP11.17□□□□□ -0.62
ATG4D-207ENST00000587256 C8orf88P0DMB2 117 aa11.17□□□□□ -0.62
ATG4D-207ENST00000587256 NPY1RP25929 384 aa11.17□□□□□ -0.62
ATG4D-207ENST00000587256 UBE2MP61081 183 aaKnown RBP11.17□□□□□ -0.62
ATG4D-207ENST00000587256 PVRIGQ6DKI7 326 aa11.17□□□□□ -0.62
ATG4D-207ENST00000587256 SLC16A13Q7RTY0 426 aa11.17□□□□□ -0.62
ATG4D-207ENST00000587256 DTD1Q8TEA8 209 aa11.17□□□□□ -0.62
ATG4D-207ENST00000587256 NEURL2Q9BR09 285 aa11.17□□□□□ -0.62
ATG4D-207ENST00000587256 TUBA4BQ9H853 241 aa11.17□□□□□ -0.62
ATG4D-207ENST00000587256 HSPB7Q9UBY9 170 aa11.17□□□□□ -0.62
ATG4D-207ENST00000587256 COL7A1Q02388 2944 aa11.16□□□□□ -0.62
ATG4D-207ENST00000587256 C15orf62A8K5M9 175 aa11.16□□□□□ -0.62
ATG4D-207ENST00000587256 ZNF785A8K8V0 405 aa11.16□□□□□ -0.62
ATG4D-207ENST00000587256 IFNA10P01566 189 aa11.16□□□□□ -0.62
ATG4D-207ENST00000587256 C2orf83Q53S99 150 aa11.16□□□□□ -0.62
ATG4D-207ENST00000587256 SBSPONQ8IVN8 264 aa11.16□□□□□ -0.62
ATG4D-207ENST00000587256 LRTM2Q8N967 370 aa11.16□□□□□ -0.62
ATG4D-207ENST00000587256 OR52B4Q8NGK2 314 aa11.16□□□□□ -0.62
ATG4D-207ENST00000587256 RBKSQ9H477 322 aa11.16□□□□□ -0.62
ATG4D-207ENST00000587256 FNDC4Q9H6D8 234 aaPredicted RBP11.16□□□□□ -0.62
ATG4D-207ENST00000587256 U3KQK5 164 aa11.16□□□□□ -0.62
ATG4D-207ENST00000587256 TRAV25A0A0B4J276 109 aa11.15□□□□□ -0.62
ATG4D-207ENST00000587256 A8MZ25 164 aa11.15□□□□□ -0.62
ATG4D-207ENST00000587256 K7EMT4 169 aa11.15□□□□□ -0.62
ATG4D-207ENST00000587256 CD7P09564 240 aa11.15□□□□□ -0.62
ATG4D-207ENST00000587256 BTCP35070 178 aa11.15□□□□□ -0.62
ATG4D-207ENST00000587256 CNPY1Q3B7I2 92 aa11.15□□□□□ -0.62
ATG4D-207ENST00000587256 ZNF600Q6ZNG1 722 aa11.15□□□□□ -0.62
ATG4D-207ENST00000587256 NOXA1Q86UR1 476 aa11.15□□□□□ -0.62
ATG4D-207ENST00000587256 RNASEH2CQ8TDP1 164 aaKnown RBP11.15□□□□□ -0.62
ATG4D-207ENST00000587256 GINS3Q9BRX5 216 aa11.15□□□□□ -0.62
ATG4D-207ENST00000587256 FLVCR2Q9UPI3 526 aa11.15□□□□□ -0.62
ATG4D-207ENST00000587256 TMED3Q9Y3Q3 217 aa11.15□□□□□ -0.62
ATG4D-207ENST00000587256 IGHV7-4-1A0A0J9YVY3 117 aa11.14□□□□□ -0.63
ATG4D-207ENST00000587256 CLN5O75503 358 aa11.14□□□□□ -0.63
ATG4D-207ENST00000587256 HOXB5P09067 269 aa11.14□□□□□ -0.63
ATG4D-207ENST00000587256 SLC25A4P12235 298 aa11.14□□□□□ -0.63
ATG4D-207ENST00000587256 C4orf46Q504U0 113 aa11.14□□□□□ -0.63
ATG4D-207ENST00000587256 LAMTOR1Q6IAA8 161 aa11.14□□□□□ -0.63
ATG4D-207ENST00000587256 TMEM116Q8NCL8 245 aa11.14□□□□□ -0.63
ATG4D-207ENST00000587256 OR4X1Q8NH49 305 aa11.14□□□□□ -0.63
ATG4D-207ENST00000587256 COQ8AQ8NI60 647 aa11.14□□□□□ -0.63
ATG4D-207ENST00000587256 WFDC10AQ9H1F0 79 aa11.14□□□□□ -0.63
ATG4D-207ENST00000587256 C19orf73Q9NVV2 129 aa11.14□□□□□ -0.63
ATG4D-207ENST00000587256 MRPL36Q9P0J6 103 aaKnown RBP11.14□□□□□ -0.63
ATG4D-207ENST00000587256 PUS1Q9Y606 427 aaKnown RBP eCLIP11.14□□□□□ -0.63
ATG4D-207ENST00000587256 IGHV3-49A0A0A0MS15 119 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 C9orf170A2RU37 121 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 LYRM1O43325 122 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 TMEM50AO95807 157 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 OR4E1P0C645 316 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 SLC25A6P12236 298 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 ANXA7P20073 488 aaKnown RBP11.13□□□□□ -0.63
ATG4D-207ENST00000587256 RND2P52198 227 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 DHRS2Q13268 280 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 MLANAQ16655 118 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 ETFRF1Q6IPR1 90 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 TOMM20LQ6UXN7 152 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 DEFB125Q8N687 156 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 TMEM170AQ8WVE7 144 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 ZNF414Q96IQ9 312 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 OR10C1Q96KK4 312 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 SPAG8Q99932 426 aaPredicted RBP11.13□□□□□ -0.63
ATG4D-207ENST00000587256 CCDC32Q9BV29 185 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 C20orf85Q9H1P6 137 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 ZMAT4Q9H898 229 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 SRD5A3Q9H8P0 318 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 U3KQ87 197 aa11.13□□□□□ -0.63
ATG4D-207ENST00000587256 IGHV3OR16-13A0A075B7E8 117 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 TRAV14DV4A0A0A6YYC5 116 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 IGHV3-74A0A0B4J1X5 117 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 OR11H12B2RN74 326 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 FAM90A26D6RGX4 464 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 IFNA4P05014 189 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 IAPPP10997 89 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 BMI1P35226 326 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 GGNBP1Q5YKI7 109 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 PRSS54Q6PEW0 395 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 LINC00299Q6ZSB3 139 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 LYG2Q86SG7 212 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 S100ZQ8WXG8 99 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 ACY3Q96HD9 319 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 RCHY1Q96PM5 261 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 RHPN1-AS1Q9BWJ2 59 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 ZFAND3Q9H8U3 227 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 SMPXQ9UHP9 88 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 STAB2Q8WWQ8 2551 aa11.12□□□□□ -0.63
ATG4D-207ENST00000587256 TRAV30A0A087WSZ9 112 aa11.11□□□□□ -0.63
ATG4D-207ENST00000587256 A6NHS1 94 aa11.11□□□□□ -0.63
ATG4D-207ENST00000587256 TSPAN4O14817 238 aa11.11□□□□□ -0.63
ATG4D-207ENST00000587256 PLA2G10O15496 165 aa11.11□□□□□ -0.63
ATG4D-207ENST00000587256 PITX3O75364 302 aa11.11□□□□□ -0.63
ATG4D-207ENST00000587256 MED6O75586 246 aa11.11□□□□□ -0.63
ATG4D-207ENST00000587256 ADAP1O75689 374 aa11.11□□□□□ -0.63
ATG4D-207ENST00000587256 TIGITQ495A1 244 aa11.11□□□□□ -0.63
ATG4D-207ENST00000587256 OR1S2Q8NGQ3 325 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms