RNA–Protein interactions for RNA: ENST00000576862.5

NUP88-213, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-213ENST00000576862 HPCAP84074 193 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 TNFAIP6P98066 277 aaPredicted RBP3.03□□□□□ -1.92
NUP88-213ENST00000576862 NNATQ16517 81 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 MORN2Q502X0 79 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 BAP18Q8IXM2 172 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 GDPD1Q8N9F7 314 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 MORN4Q8NDC4 146 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 ZNF555Q8NEP9 628 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 OR4K5Q8NGD3 323 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 OR52P1PQ8NH57 321 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 ACOT12Q8WYK0 555 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 PLEKHB2Q96CS7 222 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 MALSU1Q96EH3 234 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 GALNT14Q96FL9 552 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 SDF2Q99470 211 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 HDHD3Q9BSH5 251 aaPredicted RBP3.03□□□□□ -1.92
NUP88-213ENST00000576862 PBOV1Q9GZY1 135 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 PRTFDC1Q9NRG1 225 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 ZNF226Q9NYT6 803 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 CLCF1Q9UBD9 225 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 ST3GAL6Q9Y274 331 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 ZNF443Q9Y2A4 671 aaPredicted RBP3.03□□□□□ -1.92
NUP88-213ENST00000576862 ORC6Q9Y5N6 252 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 RFNGQ9Y644 331 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 PIKFYVEQ9Y2I7 2098 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 CACNA1HO95180 2353 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 YLPM1P49750 1951 aaKnown RBP3.03□□□□□ -1.92
NUP88-213ENST00000576862 PRUNE2Q8WUY3 3088 aa3.03□□□□□ -1.92
NUP88-213ENST00000576862 SCN2AQ99250 2005 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 ZFC3H1O60293 1989 aaKnown RBP3.02□□□□□ -1.93
NUP88-213ENST00000576862 TRAV36DV7A0A075B6V5 113 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 A0A087WUU8 490 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 A0A087WXM4 84 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 SMIM31A0A1B0GVY4 71 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 A0A1B0GX78 115 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 A0A1B0GXF2 115 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 RBFOX3A6NFN3 312 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 CPSF4LA6NMK7 179 aaKnown RBP3.02□□□□□ -1.93
NUP88-213ENST00000576862 C11orf94C9JXX5 98 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 H7C1H1 209 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 J3KT08 172 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 UPK2O00526 184 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 PDCD6O75340 191 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 ARL6IP5O75915 188 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 OR2A4O95047 310 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 NDUFC2O95298 119 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 IFNA17P01571 189 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 MUC1P15941 1255 aaPredicted RBP3.02□□□□□ -1.93
NUP88-213ENST00000576862 CXCL3P19876 107 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 EVI2AP22794 236 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 BTCP35070 178 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 GGT2P36268 569 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 RPL35P42766 123 aaKnown RBP3.02□□□□□ -1.93
NUP88-213ENST00000576862 EVX1P49640 407 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 AKR1D1P51857 326 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 RND2P52198 227 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 SMIM11AP58511 58 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 GABARAPL2P60520 117 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 DAD1P61803 113 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 GNG5P63218 68 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 PSG9Q00887 426 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 OR8B8Q15620 311 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 KCNJ8Q15842 424 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 NEDD8Q15843 81 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 LTC4SQ16873 150 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 FAM201AQ5SY85 155 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 MRPL2Q5T653 305 aaKnown RBP3.02□□□□□ -1.93
NUP88-213ENST00000576862 TMEM236Q5W0B7 351 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 XAF1Q6GPH4 301 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 ZNF773Q6PK81 442 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 SCGB1D4Q6XE38 83 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 ACBD7Q8N6N7 88 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 BPIFB6Q8NFQ5 453 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 OR1L1Q8NH94 360 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 ZNF420Q8TAQ5 688 aaPredicted RBP3.02□□□□□ -1.93
NUP88-213ENST00000576862 THEM6Q8WUY1 208 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 OR5P3Q8WZ94 311 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 LINC00477Q96M19 166 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 GPR82Q96P67 336 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 OR2A7Q96R45 310 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 PBDC1Q9BVG4 233 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 SCRT1Q9BWW7 348 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 PLA2G12AQ9BZM1 189 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 CHST6Q9GZX3 395 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 DUSP21Q9H596 190 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 C14orf105Q9NVL8 296 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 HDGFL3Q9Y3E1 203 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 HSPE1-MOB4S4R3N1 261 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 U3KQ87 197 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 TECTAO75443 2155 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 TRIOO75962 3097 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 ATG2BQ96BY7 2078 aa3.02□□□□□ -1.93
NUP88-213ENST00000576862 SDK1Q7Z5N4 2213 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 EYSQ5T1H1 3165 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 IGLV3-12A0A075B6K2 115 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 A0A1B0GWA3 101 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 C20orf202A1L168 122 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 C5orf49A4QMS7 147 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 FAM183AA6NL82 134 aa3.01□□□□□ -1.93
NUP88-213ENST00000576862 C17orf51A8MQB3 221 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms