RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 RNF2Q99496 336 aa13.28□□□□□ -0.28
CTDNEP1-207ENST00000572043 SPAG8Q99932 426 aaPredicted RBP13.28□□□□□ -0.28
CTDNEP1-207ENST00000572043 RHPN1-AS1Q9BWJ2 59 aa13.28□□□□□ -0.28
CTDNEP1-207ENST00000572043 FNDC4Q9H6D8 234 aaPredicted RBP13.28□□□□□ -0.28
CTDNEP1-207ENST00000572043 HEYLQ9NQ87 328 aaPredicted RBP13.28□□□□□ -0.28
CTDNEP1-207ENST00000572043 TRAV14DV4A0A0A6YYC5 116 aa13.27□□□□□ -0.29
CTDNEP1-207ENST00000572043 CORTO00230 105 aa13.27□□□□□ -0.29
CTDNEP1-207ENST00000572043 CHEK1O14757 476 aa13.27□□□□□ -0.29
CTDNEP1-207ENST00000572043 TSPAN4O14817 238 aa13.27□□□□□ -0.29
CTDNEP1-207ENST00000572043 TFPI2P48307 235 aa13.27□□□□□ -0.29
CTDNEP1-207ENST00000572043 SUPT4H1P63272 117 aaKnown RBP13.27□□□□□ -0.29
CTDNEP1-207ENST00000572043 PVRIGQ6DKI7 326 aa13.27□□□□□ -0.29
CTDNEP1-207ENST00000572043 ZFAND6Q6FIF0 208 aa13.27□□□□□ -0.29
CTDNEP1-207ENST00000572043 TOMM20LQ6UXN7 152 aa13.27□□□□□ -0.29
CTDNEP1-207ENST00000572043 LYZL2Q7Z4W2 148 aa13.27□□□□□ -0.29
CTDNEP1-207ENST00000572043 CCDC190Q86UF4 302 aa13.27□□□□□ -0.29
CTDNEP1-207ENST00000572043 GALNT14Q96FL9 552 aa13.27□□□□□ -0.29
CTDNEP1-207ENST00000572043 PUS1Q9Y606 427 aaKnown RBP eCLIP13.27□□□□□ -0.29
CTDNEP1-207ENST00000572043 IGHV3-66A0A0C4DH42 116 aa13.26□□□□□ -0.29
CTDNEP1-207ENST00000572043 TMEM50AO95807 157 aa13.26□□□□□ -0.29
CTDNEP1-207ENST00000572043 SULT1A3P0DMM9 295 aa13.26□□□□□ -0.29
CTDNEP1-207ENST00000572043 SULT1A4P0DMN0 295 aa13.26□□□□□ -0.29
CTDNEP1-207ENST00000572043 LYL1P12980 280 aa13.26□□□□□ -0.29
CTDNEP1-207ENST00000572043 AARDQ4LEZ3 155 aa13.26□□□□□ -0.29
CTDNEP1-207ENST00000572043 IL22RA2Q969J5 263 aa13.26□□□□□ -0.29
CTDNEP1-207ENST00000572043 OR10C1Q96KK4 312 aa13.26□□□□□ -0.29
CTDNEP1-207ENST00000572043 GGTLC1Q9BX51 225 aa13.26□□□□□ -0.29
CTDNEP1-207ENST00000572043 EDA2RQ9HAV5 297 aa13.26□□□□□ -0.29
CTDNEP1-207ENST00000572043 LOC102724200A0A096LPH7 203 aaPredicted RBP13.25□□□□□ -0.29
CTDNEP1-207ENST00000572043 A0A1B0GU03 582 aa13.25□□□□□ -0.29
CTDNEP1-207ENST00000572043 ANXA3P12429 323 aa13.25□□□□□ -0.29
CTDNEP1-207ENST00000572043 HTR2BP41595 481 aa13.25□□□□□ -0.29
CTDNEP1-207ENST00000572043 BSXQ3C1V8 233 aa13.25□□□□□ -0.29
CTDNEP1-207ENST00000572043 CASC10Q5T4H9 136 aa13.25□□□□□ -0.29
CTDNEP1-207ENST00000572043 ZNF600Q6ZNG1 722 aa13.25□□□□□ -0.29
CTDNEP1-207ENST00000572043 LGI3Q8N145 548 aa13.25□□□□□ -0.29
CTDNEP1-207ENST00000572043 GBGT1Q8N5D6 347 aa13.25□□□□□ -0.29
CTDNEP1-207ENST00000572043 SLC24A4Q8NFF2 622 aa13.25□□□□□ -0.29
CTDNEP1-207ENST00000572043 OR4C46A6NHA9 309 aa13.24□□□□□ -0.29
CTDNEP1-207ENST00000572043 CLN5O75503 358 aa13.24□□□□□ -0.29
CTDNEP1-207ENST00000572043 APOHP02749 345 aaPredicted RBP13.24□□□□□ -0.29
CTDNEP1-207ENST00000572043 VAMP1P23763 118 aa13.24□□□□□ -0.29
CTDNEP1-207ENST00000572043 SPANXN2Q5MJ10 180 aa13.24□□□□□ -0.29
CTDNEP1-207ENST00000572043 ST8SIA2Q92186 375 aa13.24□□□□□ -0.29
CTDNEP1-207ENST00000572043 GINS3Q9BRX5 216 aa13.24□□□□□ -0.29
CTDNEP1-207ENST00000572043 ZFAND3Q9H8U3 227 aa13.24□□□□□ -0.29
CTDNEP1-207ENST00000572043 A0A0B4J2A0 478 aa13.23□□□□□ -0.29
CTDNEP1-207ENST00000572043 RPS10-NUDT3A0A1W2PQS6 291 aa13.23□□□□□ -0.29
CTDNEP1-207ENST00000572043 ZNF701M0R085 212 aaPredicted RBP13.23□□□□□ -0.29
CTDNEP1-207ENST00000572043 CCR6P51684 374 aa13.23□□□□□ -0.29
CTDNEP1-207ENST00000572043 SMCO1Q147U7 214 aa13.23□□□□□ -0.29
CTDNEP1-207ENST00000572043 ODF3L2Q3SX64 289 aa13.23□□□□□ -0.29
CTDNEP1-207ENST00000572043 TIGITQ495A1 244 aa13.23□□□□□ -0.29
CTDNEP1-207ENST00000572043 WFDC3Q8IUB2 231 aa13.23□□□□□ -0.29
CTDNEP1-207ENST00000572043 OR4X1Q8NH49 305 aa13.23□□□□□ -0.29
CTDNEP1-207ENST00000572043 SRRQ9GZT4 340 aa13.23□□□□□ -0.29
CTDNEP1-207ENST00000572043 SHPKQ9UHJ6 478 aa13.23□□□□□ -0.29
CTDNEP1-207ENST00000572043 LINC00854A0A1B0GVQ3 168 aa13.22□□□□□ -0.29
CTDNEP1-207ENST00000572043 NPY1RP25929 384 aa13.22□□□□□ -0.29
CTDNEP1-207ENST00000572043 INPP1P49441 399 aa13.22□□□□□ -0.29
CTDNEP1-207ENST00000572043 SRPXP78539 464 aa13.22□□□□□ -0.29
CTDNEP1-207ENST00000572043 C2orf83Q53S99 150 aa13.22□□□□□ -0.29
CTDNEP1-207ENST00000572043 NMSQ5H8A3 153 aa13.22□□□□□ -0.29
CTDNEP1-207ENST00000572043 TCF24Q7RTU0 167 aa13.22□□□□□ -0.29
CTDNEP1-207ENST00000572043 APRG1Q8IVJ8 170 aa13.22□□□□□ -0.29
CTDNEP1-207ENST00000572043 LILRB2Q8N423 598 aa13.22□□□□□ -0.29
CTDNEP1-207ENST00000572043 OR1S1Q8NH92 325 aa13.22□□□□□ -0.29
CTDNEP1-207ENST00000572043 TMEM170AQ8WVE7 144 aa13.22□□□□□ -0.29
CTDNEP1-207ENST00000572043 RBKSQ9H477 322 aa13.22□□□□□ -0.29
CTDNEP1-207ENST00000572043 IFNA10P01566 189 aa13.21□□□□□ -0.29
CTDNEP1-207ENST00000572043 RPL35AP18077 110 aaKnown RBP13.21□□□□□ -0.29
CTDNEP1-207ENST00000572043 RND2P52198 227 aa13.21□□□□□ -0.29
CTDNEP1-207ENST00000572043 RPL11P62913 178 aaKnown RBP13.21□□□□□ -0.29
CTDNEP1-207ENST00000572043 TNFRSF9Q07011 255 aa13.21□□□□□ -0.29
CTDNEP1-207ENST00000572043 ZNF124Q15973 351 aa13.21□□□□□ -0.29
CTDNEP1-207ENST00000572043 BAK1Q16611 211 aa13.21□□□□□ -0.29
CTDNEP1-207ENST00000572043 DTD1Q8TEA8 209 aa13.21□□□□□ -0.29
CTDNEP1-207ENST00000572043 SCGB2A1O75556 95 aa13.2□□□□□ -0.3
CTDNEP1-207ENST00000572043 DFFBO76075 338 aa13.2□□□□□ -0.3
CTDNEP1-207ENST00000572043 IGKV1-17P01599 117 aa13.2□□□□□ -0.3
CTDNEP1-207ENST00000572043 BMI1P35226 326 aa13.2□□□□□ -0.3
CTDNEP1-207ENST00000572043 TMEM128Q5BJH2 165 aa13.2□□□□□ -0.3
CTDNEP1-207ENST00000572043 TRIQKQ629K1 86 aa13.2□□□□□ -0.3
CTDNEP1-207ENST00000572043 FAM90A2PQ658T7 463 aa13.2□□□□□ -0.3
CTDNEP1-207ENST00000572043 PRSS54Q6PEW0 395 aa13.2□□□□□ -0.3
CTDNEP1-207ENST00000572043 RNASEH2CQ8TDP1 164 aaKnown RBP13.2□□□□□ -0.3
CTDNEP1-207ENST00000572043 ACY3Q96HD9 319 aa13.2□□□□□ -0.3
CTDNEP1-207ENST00000572043 SLC25A21Q9BQT8 299 aaPredicted RBP13.2□□□□□ -0.3
CTDNEP1-207ENST00000572043 HSPB7Q9UBY9 170 aa13.2□□□□□ -0.3
CTDNEP1-207ENST00000572043 NPPCP23582 126 aa13.19□□□□□ -0.3
CTDNEP1-207ENST00000572043 PPP1R1AQ13522 171 aa13.19□□□□□ -0.3
CTDNEP1-207ENST00000572043 METTL26Q96S19 204 aa13.19□□□□□ -0.3
CTDNEP1-207ENST00000572043 VSIRQ9H7M9 311 aa13.19□□□□□ -0.3
CTDNEP1-207ENST00000572043 TRAV30A0A087WSZ9 112 aa13.18□□□□□ -0.3
CTDNEP1-207ENST00000572043 SFT2D2O95562 160 aa13.18□□□□□ -0.3
CTDNEP1-207ENST00000572043 IGLC1P0CG04 106 aa13.18□□□□□ -0.3
CTDNEP1-207ENST00000572043 SLC25A4P12235 298 aa13.18□□□□□ -0.3
CTDNEP1-207ENST00000572043 OR10J1P30954 320 aa13.18□□□□□ -0.3
CTDNEP1-207ENST00000572043 APOC4P55056 127 aa13.18□□□□□ -0.3
CTDNEP1-207ENST00000572043 PAFAH1B2P68402 229 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms