RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 FXYD6-FXYD2A0A087WZ82 144 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 SERTM2A0A1B0GWG4 89 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 LEUTXA8MZ59 168 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 G3V3Q6 166 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 BUB1B-PAK6H3BSN5 160 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 WRBO00258 174 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 TAAR5O14804 337 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 SLC31A2O15432 143 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 DEDDO75618 318 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 GAPDHP04406 335 aaKnown RBP5.54□□□□□ -1.52
CNOT1-222ENST00000570139 HTR1DP28221 377 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 S100A11P31949 105 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 P2RY1P47900 373 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 S100A10P60903 97 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 PAX2Q02962 417 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 ZNF816Q0VGE8 651 aaPredicted RBP5.54□□□□□ -1.52
CNOT1-222ENST00000570139 CLEC12BQ2HXU8 276 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 DEFB113Q30KQ7 82 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 ZNF585BQ52M93 769 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 RPL39P5Q59GN2 51 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 ACOT7LQ6ZUV0 252 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 H2BFWTQ7Z2G1 175 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 SMIM29Q86T20 159 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 OR4C13Q8NGP0 309 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 OR4A5Q8NH83 315 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 OR1S1Q8NH92 325 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 DCUN1D4Q92564 292 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 SEC22AQ96IW7 307 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 AQP10Q96PS8 301 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 CIB3Q96Q77 187 aaPredicted RBP5.54□□□□□ -1.52
CNOT1-222ENST00000570139 RNF5Q99942 180 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.54□□□□□ -1.52
CNOT1-222ENST00000570139 FKBP11Q9NYL4 201 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 GSKIPQ9P0R6 139 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 TNFSF18Q9UNG2 199 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 WASHC3Q9Y3C0 194 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 HSPB11Q9Y547 144 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 COL12A1Q99715 3063 aa5.54□□□□□ -1.52
CNOT1-222ENST00000570139 TRAV14DV4A0A0A6YYC5 116 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 KANTRA0A1W2PQU2 76 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 MEX3AA1L020 520 aaKnown RBP5.53□□□□□ -1.52
CNOT1-222ENST00000570139 BTBD17A6NE02 478 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 ODF3BA8MYP8 253 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 B4DSR2 109 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 SMLR1H3BR10 107 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 ARPC5O15511 151 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 RAMP3O60896 148 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 PITX3O75364 302 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 S1PR2O95136 353 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 IGKV1-39P01597 117 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 IGKV1-5P01602 117 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 IGKV1D-39P04432 117 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 P0C879 139 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 CT45A6P0DMU7 189 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 CT45A5P0DMU8 189 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 CT45A7P0DMV0 189 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 USF1P22415 310 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-222ENST00000570139 LGALS7P47929 136 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 UBE2E1P51965 193 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 LINC01547P58512 204 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-222ENST00000570139 TAS2R30P59541 319 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 RPL30P62888 115 aaKnown RBP5.53□□□□□ -1.52
CNOT1-222ENST00000570139 EIF5AP63241 154 aaKnown RBP5.53□□□□□ -1.52
CNOT1-222ENST00000570139 BAXQ07812 192 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 GPR157Q5UAW9 335 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 ZNF767PQ75MW2 155 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 ZNF429Q86V71 674 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 KCNRGQ8N5I3 272 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 Q8N7P7 452 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 C15orf54Q8N8G6 183 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 OR4P4Q8NGL7 312 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 OR52E5Q8NH55 327 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 GRPEL2Q8TAA5 225 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 LEAP2Q969E1 77 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 RPEQ96AT9 228 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 CLCC1Q96S66 551 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 MFFQ9GZY8 342 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 SLC25A31Q9H0C2 315 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 NARFLQ9H6Q4 476 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 WSB1Q9Y6I7 421 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 SPTBN1Q01082 2364 aaKnown RBP5.53□□□□□ -1.52
CNOT1-222ENST00000570139 UTP20O75691 2785 aaKnown RBP5.53□□□□□ -1.52
CNOT1-222ENST00000570139 PKDREJQ9NTG1 2253 aa5.53□□□□□ -1.52
CNOT1-222ENST00000570139 IGHV4-30-2A0A087WSY4 118 aa5.52□□□□□ -1.53
CNOT1-222ENST00000570139 A0A1W2PPE3 182 aa5.52□□□□□ -1.53
CNOT1-222ENST00000570139 CYSRT1A8MQ03 144 aa5.52□□□□□ -1.53
CNOT1-222ENST00000570139 MPTX1A8MV57 137 aa5.52□□□□□ -1.53
CNOT1-222ENST00000570139 G3V4G9 280 aa5.52□□□□□ -1.53
CNOT1-222ENST00000570139 H0YJW9 148 aa5.52□□□□□ -1.53
CNOT1-222ENST00000570139 J3QLI3 93 aa5.52□□□□□ -1.53
CNOT1-222ENST00000570139 K7EPK0 472 aa5.52□□□□□ -1.53
CNOT1-222ENST00000570139 BMPR1BO00238 502 aa5.52□□□□□ -1.53
CNOT1-222ENST00000570139 BCL2L11O43521 198 aa5.52□□□□□ -1.53
CNOT1-222ENST00000570139 KRASP01116 189 aa5.52□□□□□ -1.53
CNOT1-222ENST00000570139 ARG1P05089 322 aa5.52□□□□□ -1.53
CNOT1-222ENST00000570139 MSMBP08118 114 aa5.52□□□□□ -1.53
CNOT1-222ENST00000570139 G6PCP35575 357 aa5.52□□□□□ -1.53
CNOT1-222ENST00000570139 RPL13AP40429 203 aaKnown RBP5.52□□□□□ -1.53
CNOT1-222ENST00000570139 NKX2-5P52952 324 aaPredicted RBP5.52□□□□□ -1.53
CNOT1-222ENST00000570139 ARF6P62330 175 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms