RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 GGNBP1Q5YKI7 109 aa16.39■□□□□ 0.21
NME3-210ENST00000567271 OR2K2Q8NGT1 345 aa16.39■□□□□ 0.21
NME3-210ENST00000567271 TMEM170AQ8WVE7 144 aa16.39■□□□□ 0.21
NME3-210ENST00000567271 TMEM190Q8WZ59 177 aa16.39■□□□□ 0.21
NME3-210ENST00000567271 FNDC4Q9H6D8 234 aaPredicted RBP16.39■□□□□ 0.21
NME3-210ENST00000567271 UFC1Q9Y3C8 167 aa16.39■□□□□ 0.21
NME3-210ENST00000567271 GNG7O60262 68 aa16.38■□□□□ 0.21
NME3-210ENST00000567271 ADAP1O75689 374 aa16.38■□□□□ 0.21
NME3-210ENST00000567271 OPRK1P41145 380 aa16.38■□□□□ 0.21
NME3-210ENST00000567271 MLANAQ16655 118 aa16.38■□□□□ 0.21
NME3-210ENST00000567271 DEFB114Q30KQ6 69 aa16.38■□□□□ 0.21
NME3-210ENST00000567271 CACNG8Q8WXS5 425 aa16.38■□□□□ 0.21
NME3-210ENST00000567271 ZNF414Q96IQ9 312 aa16.38■□□□□ 0.21
NME3-210ENST00000567271 TECRQ9NZ01 308 aaKnown RBP16.38■□□□□ 0.21
NME3-210ENST00000567271 U3KQ87 197 aa16.38■□□□□ 0.21
NME3-210ENST00000567271 TRAV6A0A075B6T7 132 aa16.37■□□□□ 0.21
NME3-210ENST00000567271 IZUMO1RA6ND01 250 aa16.37■□□□□ 0.21
NME3-210ENST00000567271 FAM90A26D6RGX4 464 aa16.37■□□□□ 0.21
NME3-210ENST00000567271 C8orf88P0DMB2 117 aa16.37■□□□□ 0.21
NME3-210ENST00000567271 NPY1RP25929 384 aa16.37■□□□□ 0.21
NME3-210ENST00000567271 CD300EQ496F6 205 aaPredicted RBP16.37■□□□□ 0.21
NME3-210ENST00000567271 LCN12Q6JVE5 192 aa16.37■□□□□ 0.21
NME3-210ENST00000567271 MZT2BQ6NZ67 158 aa16.37■□□□□ 0.21
NME3-210ENST00000567271 UXS1Q8NBZ7 420 aa16.37■□□□□ 0.21
NME3-210ENST00000567271 RNASEH2CQ8TDP1 164 aaKnown RBP16.37■□□□□ 0.21
NME3-210ENST00000567271 DYNLRB2Q8TF09 96 aa16.37■□□□□ 0.21
NME3-210ENST00000567271 NUDT15Q9NV35 164 aa16.37■□□□□ 0.21
NME3-210ENST00000567271 MRPL36Q9P0J6 103 aaKnown RBP16.37■□□□□ 0.21
NME3-210ENST00000567271 FAM240BA0A1B0GVZ2 78 aa16.36■□□□□ 0.21
NME3-210ENST00000567271 TMEM50AO95807 157 aa16.36■□□□□ 0.21
NME3-210ENST00000567271 IFNA10P01566 189 aa16.36■□□□□ 0.21
NME3-210ENST00000567271 IFITM3Q01628 133 aa16.36■□□□□ 0.21
NME3-210ENST00000567271 RELQ04864 619 aaPredicted RBP16.36■□□□□ 0.21
NME3-210ENST00000567271 NOXA1Q86UR1 476 aa16.36■□□□□ 0.21
NME3-210ENST00000567271 OR52B4Q8NGK2 314 aa16.36■□□□□ 0.21
NME3-210ENST00000567271 MITD1Q8WV92 249 aa16.36■□□□□ 0.21
NME3-210ENST00000567271 MARC2Q969Z3 335 aa16.36■□□□□ 0.21
NME3-210ENST00000567271 MRPL27Q9P0M9 148 aaKnown RBP16.36■□□□□ 0.21
NME3-210ENST00000567271 RPS10-NUDT3A0A1W2PQS6 291 aa16.35■□□□□ 0.21
NME3-210ENST00000567271 OR4X1Q8NH49 305 aa16.35■□□□□ 0.21
NME3-210ENST00000567271 DAZ1Q9NQZ3 744 aaKnown RBP16.35■□□□□ 0.21
NME3-210ENST00000567271 MLXQ9UH92 298 aa16.35■□□□□ 0.21
NME3-210ENST00000567271 MPTX1A8MV57 137 aa16.34■□□□□ 0.21
NME3-210ENST00000567271 K7EMT4 169 aa16.34■□□□□ 0.21
NME3-210ENST00000567271 CLN5O75503 358 aa16.34■□□□□ 0.21
NME3-210ENST00000567271 IFNA21P01568 189 aa16.34■□□□□ 0.21
NME3-210ENST00000567271 H2AFB2P0C5Z0 115 aa16.34■□□□□ 0.21
NME3-210ENST00000567271 ATP5IP56385 69 aaPredicted RBP16.34■□□□□ 0.21
NME3-210ENST00000567271 C20orf24Q9BUV8 137 aa16.34■□□□□ 0.21
NME3-210ENST00000567271 SMAD5-AS1Q9Y6J3 95 aa16.34■□□□□ 0.21
NME3-210ENST00000567271 C15orf62A8K5M9 175 aa16.33■□□□□ 0.2
NME3-210ENST00000567271 ZNF785A8K8V0 405 aa16.33■□□□□ 0.2
NME3-210ENST00000567271 MED6O75586 246 aa16.33■□□□□ 0.2
NME3-210ENST00000567271 Q8N1Y9 231 aa16.33■□□□□ 0.2
NME3-210ENST00000567271 IGHV3OR16-8A0A075B7F1 116 aa16.32■□□□□ 0.2
NME3-210ENST00000567271 YIF1AO95070 293 aa16.32■□□□□ 0.2
NME3-210ENST00000567271 IAPPP10997 89 aa16.32■□□□□ 0.2
NME3-210ENST00000567271 SLC25A4P12235 298 aa16.32■□□□□ 0.2
NME3-210ENST00000567271 PRSS54Q6PEW0 395 aa16.32■□□□□ 0.2
NME3-210ENST00000567271 BTNL8Q6UX41 500 aa16.32■□□□□ 0.2
NME3-210ENST00000567271 OR10C1Q96KK4 312 aa16.32■□□□□ 0.2
NME3-210ENST00000567271 B9D2Q9BPU9 175 aa16.32■□□□□ 0.2
NME3-210ENST00000567271 MAGT1Q9H0U3 335 aa16.32■□□□□ 0.2
NME3-210ENST00000567271 SELENOKQ9Y6D0 94 aa16.32■□□□□ 0.2
NME3-210ENST00000567271 SYNGR2O43760 224 aa16.31■□□□□ 0.2
NME3-210ENST00000567271 ID3Q02535 119 aa16.31■□□□□ 0.2
NME3-210ENST00000567271 ETFRF1Q6IPR1 90 aa16.31■□□□□ 0.2
NME3-210ENST00000567271 TMEM116Q8NCL8 245 aa16.31■□□□□ 0.2
NME3-210ENST00000567271 OR4D5Q8NGN0 318 aa16.31■□□□□ 0.2
NME3-210ENST00000567271 ZNF431Q8TF32 576 aaPredicted RBP16.31■□□□□ 0.2
NME3-210ENST00000567271 CIB3Q96Q77 187 aaPredicted RBP16.31■□□□□ 0.2
NME3-210ENST00000567271 SEC22CQ9BRL7 303 aa16.31■□□□□ 0.2
NME3-210ENST00000567271 TRAV30A0A087WSZ9 112 aa16.3■□□□□ 0.2
NME3-210ENST00000567271 ZNF207O43670 478 aaKnown RBP16.3■□□□□ 0.2
NME3-210ENST00000567271 IFNA4P05014 189 aa16.3■□□□□ 0.2
NME3-210ENST00000567271 TOMM20LQ6UXN7 152 aa16.3■□□□□ 0.2
NME3-210ENST00000567271 ZNF600Q6ZNG1 722 aa16.3■□□□□ 0.2
NME3-210ENST00000567271 TMEM61Q8N0U2 210 aa16.3■□□□□ 0.2
NME3-210ENST00000567271 ENKURQ8TC29 256 aa16.3■□□□□ 0.2
NME3-210ENST00000567271 WDR89Q96FK6 387 aaPredicted RBP16.3■□□□□ 0.2
NME3-210ENST00000567271 WRBO00258 174 aa16.29■□□□□ 0.2
NME3-210ENST00000567271 SCGB2A1O75556 95 aa16.29■□□□□ 0.2
NME3-210ENST00000567271 RND2P52198 227 aa16.29■□□□□ 0.2
NME3-210ENST00000567271 CD69Q07108 199 aa16.29■□□□□ 0.2
NME3-210ENST00000567271 PUS1Q9Y606 427 aaKnown RBP eCLIP16.29■□□□□ 0.2
NME3-210ENST00000567271 IGKV1-17P01599 117 aa16.28■□□□□ 0.2
NME3-210ENST00000567271 NKX2-1P43699 371 aaPredicted RBP16.28■□□□□ 0.2
NME3-210ENST00000567271 GUCA2BQ16661 112 aa16.28■□□□□ 0.2
NME3-210ENST00000567271 IAH1Q2TAA2 248 aaPredicted RBP16.28■□□□□ 0.2
NME3-210ENST00000567271 TIGITQ495A1 244 aa16.28■□□□□ 0.2
NME3-210ENST00000567271 SLC16A13Q7RTY0 426 aa16.28■□□□□ 0.2
NME3-210ENST00000567271 GTSCR1Q86UQ5 136 aa16.28■□□□□ 0.2
NME3-210ENST00000567271 ZFAND3Q9H8U3 227 aa16.28■□□□□ 0.2
NME3-210ENST00000567271 SMPXQ9UHP9 88 aa16.28■□□□□ 0.2
NME3-210ENST00000567271 TRAV14DV4A0A0A6YYC5 116 aa16.27■□□□□ 0.2
NME3-210ENST00000567271 TRAV25A0A0B4J276 109 aa16.27■□□□□ 0.2
NME3-210ENST00000567271 IGHV7-4-1A0A0J9YVY3 117 aa16.27■□□□□ 0.2
NME3-210ENST00000567271 IGLC1P0CG04 106 aa16.27■□□□□ 0.2
NME3-210ENST00000567271 GPX4P36969 197 aaPredicted RBP16.27■□□□□ 0.2
NME3-210ENST00000567271 POLR2GP62487 172 aaKnown RBP eCLIP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms