RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 CXCL1P09341 107 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 TRGC1P0CF51 173 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 PSMB3P49720 205 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 BPIFB3P59826 476 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 RPL19P84098 196 aaKnown RBP3.29□□□□□ -1.88
LINC00561-201ENST00000565815 TMEM241Q24JQ0 296 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 NCR3LG1Q68D85 454 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 OR5A2Q8NGI9 324 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 OR1P1Q8NH06 330 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 ZNF418Q8TF45 676 aaPredicted RBP3.29□□□□□ -1.88
LINC00561-201ENST00000565815 NPRL2Q8WTW4 380 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 DNAJA3Q96EY1 480 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 CIB3Q96Q77 187 aaPredicted RBP3.29□□□□□ -1.88
LINC00561-201ENST00000565815 VGLL1Q99990 258 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 HDHD3Q9BSH5 251 aaPredicted RBP3.29□□□□□ -1.88
LINC00561-201ENST00000565815 PKIBQ9C010 78 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 OR2H1Q9GZK4 316 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 SLC7A10Q9NS82 523 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 MPC1Q9Y5U8 109 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 NF1P21359 2839 aa3.29□□□□□ -1.88
LINC00561-201ENST00000565815 IGKV1-27A0A075B6S5 117 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 IGKV1-12A0A0C4DH73 117 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 CTXND1A0A1B0GTU2 59 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 CD300LBA8K4G0 201 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 H7BYZ3 331 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 SYNGR2O43760 224 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 CHST1O43916 411 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 PGLYRP1O75594 196 aaPredicted RBP3.28□□□□□ -1.88
LINC00561-201ENST00000565815 HRASP01112 189 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 IGKV1D-12P01611 117 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 TRGC2P03986 189 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 PFN1P07737 140 aaKnown RBP3.28□□□□□ -1.88
LINC00561-201ENST00000565815 USF1P22415 310 aaPredicted RBP3.28□□□□□ -1.88
LINC00561-201ENST00000565815 RAB11AP62491 216 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 CCL20P78556 96 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 SNAI3Q3KNW1 292 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 CEACAM21Q3KPI0 293 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 SPIN3Q5JUX0 258 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 ZNF573Q86YE8 665 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 ZNF525Q8N782 197 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 ZIC4Q8N9L1 334 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 WDR31Q8NA23 367 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 HIST1H2BLQ99880 126 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 MRPL37Q9BZE1 423 aaKnown RBP3.28□□□□□ -1.88
LINC00561-201ENST00000565815 PARP12Q9H0J9 701 aaKnown RBP3.28□□□□□ -1.88
LINC00561-201ENST00000565815 KCNIP2Q9NS61 270 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 NBPF19A0A087WUL8 3843 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 IGKV3D-15A0A087WSY6 115 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 TGIF2-C20orf24A0A0A6YYL0 155 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 A0A1W2PPR1 153 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 MAP1LC3B2A6NCE7 125 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 ZNF727A8MUV8 499 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 A8MWP6 167 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 C17orf112F2Z3M2 114 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 F6UZH7 168 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 TRAPPC2LH3BP13 241 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 ANGPTL7O43827 346 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 PDE6DO43924 150 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 OR7C1O76099 320 aaPredicted RBP3.28□□□□□ -1.88
LINC00561-201ENST00000565815 SOD3P08294 240 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 IL2RGP31785 369 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 ARR3P36575 388 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 RANP62826 216 aaKnown RBP3.28□□□□□ -1.88
LINC00561-201ENST00000565815 MEF2BQ02080 365 aaPredicted RBP3.28□□□□□ -1.88
LINC00561-201ENST00000565815 BSXQ3C1V8 233 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 PIGYQ3MUY2 71 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 COX19Q49B96 90 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 PHYHD1Q5SRE7 291 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 RAET1LQ5VY80 246 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 WDR25Q64LD2 544 aaPredicted RBP3.28□□□□□ -1.88
LINC00561-201ENST00000565815 AAED1Q7RTV5 226 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 GAPTQ8N292 157 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 OR11L1Q8NGX0 322 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 OR10J5Q8NHC4 309 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 FRZBQ92765 325 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 RAB1CQ92928 201 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 APOBEC3DQ96AK3 386 aaPredicted RBP3.28□□□□□ -1.88
LINC00561-201ENST00000565815 POM121L2Q96KW2 1035 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 TMEM147Q9BVK8 224 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 GPR61Q9BZJ8 451 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 MAP1LC3BQ9GZQ8 125 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 WDR61Q9GZS3 305 aaKnown RBP3.28□□□□□ -1.88
LINC00561-201ENST00000565815 GFRA4Q9GZZ7 299 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 OR51I2Q9H344 312 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 SLC39A9Q9NUM3 307 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 TAAR3PQ9P1P4 343 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 GNG13Q9P2W3 67 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 LRBAP50851 2863 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 CELSR2Q9HCU4 2923 aa3.28□□□□□ -1.88
LINC00561-201ENST00000565815 ZNF716A6NP11 495 aa3.28□□□□□ -1.89
LINC00561-201ENST00000565815 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.28□□□□□ -1.89
LINC00561-201ENST00000565815 K7EQD1 137 aa3.28□□□□□ -1.89
LINC00561-201ENST00000565815 SS18L1O75177 396 aaPredicted RBP3.28□□□□□ -1.89
LINC00561-201ENST00000565815 MPDU1O75352 247 aa3.28□□□□□ -1.89
LINC00561-201ENST00000565815 MMP7P09237 267 aaPredicted RBP3.28□□□□□ -1.89
LINC00561-201ENST00000565815 CCL3P10147 92 aa3.28□□□□□ -1.89
LINC00561-201ENST00000565815 FABP4P15090 132 aa3.28□□□□□ -1.89
LINC00561-201ENST00000565815 ZNF32P17041 273 aa3.28□□□□□ -1.89
LINC00561-201ENST00000565815 COX5AP20674 150 aa3.28□□□□□ -1.89
LINC00561-201ENST00000565815 GPR183P32249 361 aa3.28□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms