RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 COPZ2Q9P299 210 aa12.27□□□□□ -0.45
CCNF-203ENST00000564236 CLN5O75503 358 aa12.26□□□□□ -0.45
CCNF-203ENST00000564236 CRYBB3P26998 211 aa12.26□□□□□ -0.45
CCNF-203ENST00000564236 TFPI2P48307 235 aa12.26□□□□□ -0.45
CCNF-203ENST00000564236 SURF2Q15527 256 aaPredicted RBP12.26□□□□□ -0.45
CCNF-203ENST00000564236 STEAP1BQ6NZ63 245 aa12.26□□□□□ -0.45
CCNF-203ENST00000564236 Q6ZRM9 215 aa12.26□□□□□ -0.45
CCNF-203ENST00000564236 RRNAD1Q96FB5 475 aaKnown RBP12.26□□□□□ -0.45
CCNF-203ENST00000564236 PDCD10Q9BUL8 212 aa12.26□□□□□ -0.45
CCNF-203ENST00000564236 TMEM222Q9H0R3 208 aa12.26□□□□□ -0.45
CCNF-203ENST00000564236 MIXL1Q9H2W2 232 aa12.26□□□□□ -0.45
CCNF-203ENST00000564236 TMEM231Q9H6L2 316 aa12.26□□□□□ -0.45
CCNF-203ENST00000564236 IGHV3OR16-13A0A075B7E8 117 aa12.25□□□□□ -0.45
CCNF-203ENST00000564236 IGHV3-74A0A0B4J1X5 117 aa12.25□□□□□ -0.45
CCNF-203ENST00000564236 RAB3DO95716 219 aa12.25□□□□□ -0.45
CCNF-203ENST00000564236 LY6G6CO95867 125 aa12.25□□□□□ -0.45
CCNF-203ENST00000564236 ETV6P41212 452 aa12.25□□□□□ -0.45
CCNF-203ENST00000564236 PPP5CP53041 499 aa12.25□□□□□ -0.45
CCNF-203ENST00000564236 SPCS3P61009 180 aa12.25□□□□□ -0.45
CCNF-203ENST00000564236 TRIM16LQ309B1 348 aa12.25□□□□□ -0.45
CCNF-203ENST00000564236 SP6Q3SY56 376 aa12.25□□□□□ -0.45
CCNF-203ENST00000564236 RNASE12Q5GAN4 147 aaKnown RBP12.25□□□□□ -0.45
CCNF-203ENST00000564236 GBGT1Q8N5D6 347 aa12.25□□□□□ -0.45
CCNF-203ENST00000564236 GLYATL2Q8WU03 294 aa12.25□□□□□ -0.45
CCNF-203ENST00000564236 RARRES2Q99969 163 aa12.25□□□□□ -0.45
CCNF-203ENST00000564236 MRPL36Q9P0J6 103 aaKnown RBP12.25□□□□□ -0.45
CCNF-203ENST00000564236 IGKV3-7A0A075B6H7 116 aa12.24□□□□□ -0.45
CCNF-203ENST00000564236 A0A1W2PS18 150 aa12.24□□□□□ -0.45
CCNF-203ENST00000564236 CTDSPLO15194 276 aa12.24□□□□□ -0.45
CCNF-203ENST00000564236 IGKV1-17P01599 117 aa12.24□□□□□ -0.45
CCNF-203ENST00000564236 NPPCP23582 126 aa12.24□□□□□ -0.45
CCNF-203ENST00000564236 HOXA1P49639 335 aaPredicted RBP12.24□□□□□ -0.45
CCNF-203ENST00000564236 MEF2DQ14814 521 aa12.24□□□□□ -0.45
CCNF-203ENST00000564236 MARCH1Q8TCQ1 289 aa12.24□□□□□ -0.45
CCNF-203ENST00000564236 PHLDA1Q8WV24 401 aaPredicted RBP12.24□□□□□ -0.45
CCNF-203ENST00000564236 GRAMD2BQ96HH9 432 aa12.24□□□□□ -0.45
CCNF-203ENST00000564236 RTBDNQ9BSG5 229 aaPredicted RBP12.24□□□□□ -0.45
CCNF-203ENST00000564236 FRAS1Q86XX4 4008 aa12.23□□□□□ -0.45
CCNF-203ENST00000564236 TRAV30A0A087WSZ9 112 aa12.23□□□□□ -0.45
CCNF-203ENST00000564236 SCGB2A1O75556 95 aa12.23□□□□□ -0.45
CCNF-203ENST00000564236 OPRK1P41145 380 aa12.23□□□□□ -0.45
CCNF-203ENST00000564236 HTR2BP41595 481 aa12.23□□□□□ -0.45
CCNF-203ENST00000564236 ALDH3B2P48448 385 aa12.23□□□□□ -0.45
CCNF-203ENST00000564236 SCGB2B2Q4G0G5 96 aa12.23□□□□□ -0.45
CCNF-203ENST00000564236 LHFPL5Q8TAF8 219 aa12.23□□□□□ -0.45
CCNF-203ENST00000564236 SMIM4Q8WVI0 70 aa12.23□□□□□ -0.45
CCNF-203ENST00000564236 RBPMSQ93062 196 aaKnown RBP12.23□□□□□ -0.45
CCNF-203ENST00000564236 MFFQ9GZY8 342 aa12.23□□□□□ -0.45
CCNF-203ENST00000564236 NAA60Q9H7X0 242 aa12.23□□□□□ -0.45
CCNF-203ENST00000564236 ENY2Q9NPA8 101 aa12.23□□□□□ -0.45
CCNF-203ENST00000564236 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.23□□□□□ -0.45
CCNF-203ENST00000564236 RABL2AQ9UBK7 228 aaPredicted RBP12.23□□□□□ -0.45
CCNF-203ENST00000564236 RABL2BQ9UNT1 228 aa12.23□□□□□ -0.45
CCNF-203ENST00000564236 U3KQE9 123 aa12.23□□□□□ -0.45
CCNF-203ENST00000564236 TEX13DA0A0J9YY54 714 aaPredicted RBP12.22□□□□□ -0.45
CCNF-203ENST00000564236 K7EQG2 157 aa12.22□□□□□ -0.45
CCNF-203ENST00000564236 DNASE2O00115 360 aaPredicted RBP12.22□□□□□ -0.45
CCNF-203ENST00000564236 OR5AC1P0C628 307 aa12.22□□□□□ -0.45
CCNF-203ENST00000564236 DEFB131AP59861 70 aa12.22□□□□□ -0.45
CCNF-203ENST00000564236 DHODHQ02127 395 aa12.22□□□□□ -0.45
CCNF-203ENST00000564236 C2orf83Q53S99 150 aa12.22□□□□□ -0.45
CCNF-203ENST00000564236 TMEM41BQ5BJD5 291 aa12.22□□□□□ -0.45
CCNF-203ENST00000564236 LGALS9CQ6DKI2 356 aa12.22□□□□□ -0.45
CCNF-203ENST00000564236 FAM24BQ8N5W8 94 aa12.22□□□□□ -0.45
CCNF-203ENST00000564236 OR11H2Q8NH07 326 aa12.22□□□□□ -0.45
CCNF-203ENST00000564236 METTL26Q96S19 204 aa12.22□□□□□ -0.45
CCNF-203ENST00000564236 CACFD1Q9UGQ2 172 aa12.22□□□□□ -0.45
CCNF-203ENST00000564236 GPR132Q9UNW8 380 aa12.22□□□□□ -0.45
CCNF-203ENST00000564236 TMEM56-RWDD3S4R434 201 aa12.22□□□□□ -0.45
CCNF-203ENST00000564236 RPS10-NUDT3A0A1W2PQS6 291 aa12.21□□□□□ -0.45
CCNF-203ENST00000564236 CRYM-AS1A6NIL9 109 aa12.21□□□□□ -0.45
CCNF-203ENST00000564236 CA1P00915 261 aaPredicted RBP12.21□□□□□ -0.45
CCNF-203ENST00000564236 GIG44P09565 113 aaPredicted RBP12.21□□□□□ -0.45
CCNF-203ENST00000564236 IGLC1P0CG04 106 aa12.21□□□□□ -0.45
CCNF-203ENST00000564236 MLANAQ16655 118 aa12.21□□□□□ -0.45
CCNF-203ENST00000564236 SELENOHQ8IZQ5 122 aaKnown RBP12.21□□□□□ -0.45
CCNF-203ENST00000564236 RNASEH2CQ8TDP1 164 aaKnown RBP12.21□□□□□ -0.45
CCNF-203ENST00000564236 DCANP1Q8TF63 244 aa12.21□□□□□ -0.45
CCNF-203ENST00000564236 C14orf166Q9Y224 244 aaKnown RBP12.21□□□□□ -0.45
CCNF-203ENST00000564236 IGHV3-66A0A0C4DH42 116 aa12.2□□□□□ -0.46
CCNF-203ENST00000564236 CTDSP2O14595 271 aa12.2□□□□□ -0.46
CCNF-203ENST00000564236 SLC25A4P12235 298 aa12.2□□□□□ -0.46
CCNF-203ENST00000564236 P2RY1P47900 373 aa12.2□□□□□ -0.46
CCNF-203ENST00000564236 YPEL3P61236 119 aaPredicted RBP12.2□□□□□ -0.46
CCNF-203ENST00000564236 TMEM187Q14656 261 aa12.2□□□□□ -0.46
CCNF-203ENST00000564236 LEMD1Q68G75 181 aa12.2□□□□□ -0.46
CCNF-203ENST00000564236 PRSS54Q6PEW0 395 aa12.2□□□□□ -0.46
CCNF-203ENST00000564236 TRPT1Q86TN4 253 aaKnown RBP12.2□□□□□ -0.46
CCNF-203ENST00000564236 OR1S2Q8NGQ3 325 aa12.2□□□□□ -0.46
CCNF-203ENST00000564236 C11orf45Q8TAV5 145 aa12.2□□□□□ -0.46
CCNF-203ENST00000564236 IL22RA2Q969J5 263 aa12.2□□□□□ -0.46
CCNF-203ENST00000564236 MRPS26Q9BYN8 205 aaKnown RBP12.2□□□□□ -0.46
CCNF-203ENST00000564236 HRH4Q9H3N8 390 aa12.2□□□□□ -0.46
CCNF-203ENST00000564236 DISC1C4P0D8 188 aa12.19□□□□□ -0.46
CCNF-203ENST00000564236 AKAIN1P0CW23 69 aa12.19□□□□□ -0.46
CCNF-203ENST00000564236 SPP1P10451 314 aa12.19□□□□□ -0.46
CCNF-203ENST00000564236 TCTAP57738 103 aa12.19□□□□□ -0.46
CCNF-203ENST00000564236 SPCS2Q15005 226 aa12.19□□□□□ -0.46
CCNF-203ENST00000564236 NMSQ5H8A3 153 aa12.19□□□□□ -0.46
CCNF-203ENST00000564236 FAAP20Q6NZ36 180 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms