RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 LAMTOR1Q6IAA8 161 aa14.24□□□□□ -0.13
TRADD-203ENST00000563348 SPATA25Q9BR10 227 aa14.24□□□□□ -0.13
TRADD-203ENST00000563348 SRRQ9GZT4 340 aa14.24□□□□□ -0.13
TRADD-203ENST00000563348 FNDC4Q9H6D8 234 aaPredicted RBP14.24□□□□□ -0.13
TRADD-203ENST00000563348 HEYLQ9NQ87 328 aaPredicted RBP14.24□□□□□ -0.13
TRADD-203ENST00000563348 SHPKQ9UHJ6 478 aa14.24□□□□□ -0.13
TRADD-203ENST00000563348 RBMY1BA6NDE4 496 aaKnown RBP14.23□□□□□ -0.13
TRADD-203ENST00000563348 RBMY1EA6NEQ0 496 aaKnown RBP14.23□□□□□ -0.13
TRADD-203ENST00000563348 RBMY1DP0C7P1 496 aaKnown RBP14.23□□□□□ -0.13
TRADD-203ENST00000563348 HTR2BP41595 481 aa14.23□□□□□ -0.13
TRADD-203ENST00000563348 SRPXP78539 464 aa14.23□□□□□ -0.13
TRADD-203ENST00000563348 MLANAQ16655 118 aa14.23□□□□□ -0.13
TRADD-203ENST00000563348 TMEM128Q5BJH2 165 aa14.23□□□□□ -0.13
TRADD-203ENST00000563348 NMSQ5H8A3 153 aa14.23□□□□□ -0.13
TRADD-203ENST00000563348 LYZL2Q7Z4W2 148 aa14.23□□□□□ -0.13
TRADD-203ENST00000563348 LGI3Q8N145 548 aa14.23□□□□□ -0.13
TRADD-203ENST00000563348 SPAG8Q99932 426 aaPredicted RBP14.23□□□□□ -0.13
TRADD-203ENST00000563348 SRD5A3Q9H8P0 318 aa14.23□□□□□ -0.13
TRADD-203ENST00000563348 KMT2CQ8NEZ4 4911 aaKnown RBP14.22□□□□□ -0.13
TRADD-203ENST00000563348 IGHV7-4-1A0A0J9YVY3 117 aa14.22□□□□□ -0.13
TRADD-203ENST00000563348 CEBPZOSA8MTT3 80 aa14.22□□□□□ -0.13
TRADD-203ENST00000563348 CCR6P51684 374 aa14.22□□□□□ -0.13
TRADD-203ENST00000563348 C2orf83Q53S99 150 aa14.22□□□□□ -0.13
TRADD-203ENST00000563348 TOMM20LQ6UXN7 152 aa14.22□□□□□ -0.13
TRADD-203ENST00000563348 TMED4Q7Z7H5 227 aa14.22□□□□□ -0.13
TRADD-203ENST00000563348 OR4X1Q8NH49 305 aa14.22□□□□□ -0.13
TRADD-203ENST00000563348 RHPN1-AS1Q9BWJ2 59 aa14.22□□□□□ -0.13
TRADD-203ENST00000563348 NDUFA13Q9P0J0 144 aa14.22□□□□□ -0.13
TRADD-203ENST00000563348 TRAV14DV4A0A0A6YYC5 116 aa14.21□□□□□ -0.13
TRADD-203ENST00000563348 PIGBOS1A0A0B4J2F0 54 aa14.21□□□□□ -0.13
TRADD-203ENST00000563348 CHEK1O14757 476 aa14.21□□□□□ -0.13
TRADD-203ENST00000563348 CLN5O75503 358 aa14.21□□□□□ -0.13
TRADD-203ENST00000563348 OPRK1P41145 380 aa14.21□□□□□ -0.13
TRADD-203ENST00000563348 ZNF600Q6ZNG1 722 aa14.21□□□□□ -0.13
TRADD-203ENST00000563348 TMEM116Q8NCL8 245 aa14.21□□□□□ -0.13
TRADD-203ENST00000563348 CITED4Q96RK1 184 aa14.21□□□□□ -0.13
TRADD-203ENST00000563348 MRPL36Q9P0J6 103 aaKnown RBP14.21□□□□□ -0.13
TRADD-203ENST00000563348 C3orf84H3BNL1 204 aa14.2□□□□□ -0.14
TRADD-203ENST00000563348 SMCO1Q147U7 214 aa14.2□□□□□ -0.14
TRADD-203ENST00000563348 BAK1Q16611 211 aa14.2□□□□□ -0.14
TRADD-203ENST00000563348 RNASEH2CQ8TDP1 164 aaKnown RBP14.2□□□□□ -0.14
TRADD-203ENST00000563348 RNF2Q99496 336 aa14.2□□□□□ -0.14
TRADD-203ENST00000563348 HIPK2Q9H2X6 1198 aa14.2□□□□□ -0.14
TRADD-203ENST00000563348 A0A1B0GU03 582 aa14.19□□□□□ -0.14
TRADD-203ENST00000563348 RPS10-NUDT3A0A1W2PQS6 291 aa14.19□□□□□ -0.14
TRADD-203ENST00000563348 TNFRSF9Q07011 255 aa14.19□□□□□ -0.14
TRADD-203ENST00000563348 LRTM2Q8N967 370 aa14.19□□□□□ -0.14
TRADD-203ENST00000563348 SLC24A4Q8NFF2 622 aa14.19□□□□□ -0.14
TRADD-203ENST00000563348 TMEM170AQ8WVE7 144 aa14.19□□□□□ -0.14
TRADD-203ENST00000563348 GINS3Q9BRX5 216 aa14.19□□□□□ -0.14
TRADD-203ENST00000563348 HSPB7Q9UBY9 170 aa14.19□□□□□ -0.14
TRADD-203ENST00000563348 PUS1Q9Y606 427 aaKnown RBP eCLIP14.19□□□□□ -0.14
TRADD-203ENST00000563348 IGHV3-49A0A0A0MS15 119 aa14.18□□□□□ -0.14
TRADD-203ENST00000563348 DUXBA0A1W2PPF3 345 aa14.18□□□□□ -0.14
TRADD-203ENST00000563348 NXPH3O95157 252 aa14.18□□□□□ -0.14
TRADD-203ENST00000563348 NOXA1Q86UR1 476 aa14.18□□□□□ -0.14
TRADD-203ENST00000563348 MUC7Q8TAX7 377 aa14.18□□□□□ -0.14
TRADD-203ENST00000563348 ZFAND3Q9H8U3 227 aa14.18□□□□□ -0.14
TRADD-203ENST00000563348 TRAV30A0A087WSZ9 112 aa14.17□□□□□ -0.14
TRADD-203ENST00000563348 NAP1L6A6NFF2 107 aa14.17□□□□□ -0.14
TRADD-203ENST00000563348 OR4C46A6NHA9 309 aa14.17□□□□□ -0.14
TRADD-203ENST00000563348 SFT2D2O95562 160 aa14.17□□□□□ -0.14
TRADD-203ENST00000563348 SLC25A4P12235 298 aa14.17□□□□□ -0.14
TRADD-203ENST00000563348 VAMP1P23763 118 aa14.17□□□□□ -0.14
TRADD-203ENST00000563348 NPY1RP25929 384 aa14.17□□□□□ -0.14
TRADD-203ENST00000563348 INPP1P49441 399 aa14.17□□□□□ -0.14
TRADD-203ENST00000563348 TRIQKQ629K1 86 aa14.17□□□□□ -0.14
TRADD-203ENST00000563348 FAM90A2PQ658T7 463 aa14.17□□□□□ -0.14
TRADD-203ENST00000563348 PRSS54Q6PEW0 395 aa14.17□□□□□ -0.14
TRADD-203ENST00000563348 SDHCQ99643 169 aaPredicted RBP14.17□□□□□ -0.14
TRADD-203ENST00000563348 EDA2RQ9HAV5 297 aa14.17□□□□□ -0.14
TRADD-203ENST00000563348 U3KQ87 197 aa14.17□□□□□ -0.14
TRADD-203ENST00000563348 IGHV3OR16-13A0A075B7E8 117 aa14.16□□□□□ -0.14
TRADD-203ENST00000563348 IGHV3-74A0A0B4J1X5 117 aa14.16□□□□□ -0.14
TRADD-203ENST00000563348 PITX3O75364 302 aa14.16□□□□□ -0.14
TRADD-203ENST00000563348 SCGB2A1O75556 95 aa14.16□□□□□ -0.14
TRADD-203ENST00000563348 IGKV1-17P01599 117 aa14.16□□□□□ -0.14
TRADD-203ENST00000563348 PPP1R1AQ13522 171 aa14.16□□□□□ -0.14
TRADD-203ENST00000563348 RBMS2Q15434 407 aaKnown RBP14.16□□□□□ -0.14
TRADD-203ENST00000563348 CENPSQ8N2Z9 138 aa14.16□□□□□ -0.14
TRADD-203ENST00000563348 OR1S1Q8NH92 325 aa14.16□□□□□ -0.14
TRADD-203ENST00000563348 DTD1Q8TEA8 209 aa14.16□□□□□ -0.14
TRADD-203ENST00000563348 FAM110AQ9BQ89 295 aa14.16□□□□□ -0.14
TRADD-203ENST00000563348 RBKSQ9H477 322 aa14.16□□□□□ -0.14
TRADD-203ENST00000563348 VSIRQ9H7M9 311 aa14.16□□□□□ -0.14
TRADD-203ENST00000563348 LOC102724200A0A096LPH7 203 aaPredicted RBP14.15□□□□□ -0.14
TRADD-203ENST00000563348 IFNA10P01566 189 aa14.15□□□□□ -0.14
TRADD-203ENST00000563348 APOHP02749 345 aaPredicted RBP14.15□□□□□ -0.14
TRADD-203ENST00000563348 CD5P06127 495 aa14.15□□□□□ -0.14
TRADD-203ENST00000563348 SLC25A6P12236 298 aa14.15□□□□□ -0.14
TRADD-203ENST00000563348 BMI1P35226 326 aa14.15□□□□□ -0.14
TRADD-203ENST00000563348 ATP5IP56385 69 aaPredicted RBP14.15□□□□□ -0.14
TRADD-203ENST00000563348 UBE2MP61081 183 aaKnown RBP14.15□□□□□ -0.14
TRADD-203ENST00000563348 ODF3L2Q3SX64 289 aa14.15□□□□□ -0.14
TRADD-203ENST00000563348 TIGITQ495A1 244 aa14.15□□□□□ -0.14
TRADD-203ENST00000563348 ETFRF1Q6IPR1 90 aa14.15□□□□□ -0.14
TRADD-203ENST00000563348 LILRB2Q8N423 598 aa14.15□□□□□ -0.14
TRADD-203ENST00000563348 GGTLC1Q9BX51 225 aa14.15□□□□□ -0.14
TRADD-203ENST00000563348 RETNQ9HD89 108 aa14.15□□□□□ -0.14
TRADD-203ENST00000563348 UBQLN2Q9UHD9 624 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms