RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 KIR2DL5BA0A0G2JN68 375 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 KIR2DL5BA0A0G2JPC4 375 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 SPRY2O43597 315 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 EIF4EBP3O60516 100 aaPredicted RBP4.07□□□□□ -1.76
SMAD3-209ENST00000558894 SNAPC5O75971 98 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 TMEM50AO95807 157 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 RNASE2P10153 161 aaKnown RBP4.07□□□□□ -1.76
SMAD3-209ENST00000558894 ZNF182P17025 639 aaPredicted RBP4.07□□□□□ -1.76
SMAD3-209ENST00000558894 UCP1P25874 307 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 ALDH3B2P48448 385 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 RORCP51449 518 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 ERVK-16P61578 105 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 TSPAN5P62079 268 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 MLANAQ16655 118 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 DEFB135Q30KP9 77 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 Q56UQ5 140 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 SPINK9Q5DT21 86 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 TOMM20LQ6UXN7 152 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 LYG2Q86SG7 212 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 KIR2DL5AQ8N109 375 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 ARRDC1Q8N5I2 433 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 FAM24BQ8N5W8 94 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 UBAC2Q8NBM4 344 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 TMEM116Q8NCL8 245 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 KIR2DL5BQ8NHK3 375 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 TMEM170AQ8WVE7 144 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 LINC00476Q8WZB0 136 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 ZNF486Q96H40 463 aaPredicted RBP4.07□□□□□ -1.76
SMAD3-209ENST00000558894 RTBDNQ9BSG5 229 aaPredicted RBP4.07□□□□□ -1.76
SMAD3-209ENST00000558894 C20orf24Q9BUV8 137 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 RHPN1-AS1Q9BWJ2 59 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 FNDC4Q9H6D8 234 aaPredicted RBP4.07□□□□□ -1.76
SMAD3-209ENST00000558894 VSIRQ9H7M9 311 aa4.07□□□□□ -1.76
SMAD3-209ENST00000558894 TRAV6A0A075B6T7 132 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 IGHV3OR16-13A0A075B7E8 117 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 TRAV14DV4A0A0A6YYC5 116 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 IGHV3-74A0A0B4J1X5 117 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 C3orf85A0A1B0GTC6 90 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 OR4C46A6NHA9 309 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 UBE2CO00762 179 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 CTDSP2O14595 271 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 NUPL2O15504 423 aaKnown RBP4.06□□□□□ -1.76
SMAD3-209ENST00000558894 CYB5BO43169 146 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 ST8SIA3O43173 380 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 GATCO43716 136 aaKnown RBP4.06□□□□□ -1.76
SMAD3-209ENST00000558894 SNAPINO95295 136 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 CDS2O95674 445 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 GHRHP01286 108 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 GIG44P09565 113 aaPredicted RBP4.06□□□□□ -1.76
SMAD3-209ENST00000558894 RPL35AP18077 110 aaKnown RBP4.06□□□□□ -1.76
SMAD3-209ENST00000558894 BMI1P35226 326 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 ETV6P41212 452 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 APOC4P55056 127 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 MFAP4P55083 255 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 PIGPP57054 158 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 SP6Q3SY56 376 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 RNASE12Q5GAN4 147 aaKnown RBP4.06□□□□□ -1.76
SMAD3-209ENST00000558894 LAMTOR1Q6IAA8 161 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 H2BFWTQ7Z2G1 175 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 STX12Q86Y82 276 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 LINC00528Q8N1L1 170 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 CENPSQ8N2Z9 138 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 TMEM229BQ8NBD8 167 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 OR13C8Q8NGS7 320 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 OR4A16Q8NH70 328 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 TERB2Q8NHR7 220 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 MARCH1Q8TCQ1 289 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 GLYATL2Q8WU03 294 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 ST8SIA2Q92186 375 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 MISP3Q96FF7 219 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 GALNT14Q96FL9 552 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 EXTL2Q9UBQ6 330 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 U3KQE9 123 aa4.06□□□□□ -1.76
SMAD3-209ENST00000558894 DYNC1H1Q14204 4646 aaKnown RBP4.05□□□□□ -1.76
SMAD3-209ENST00000558894 CCDC160A6NGH7 325 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 FAM25AB3EWG3 89 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 FAM25CB3EWG5 89 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 FAM25GB3EWG6 89 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 GABARAPH6UMI1 98 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 DFFBO76075 338 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 IGKV1-17P01599 117 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 TBPP20226 339 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 PPP5CP53041 499 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 RNASE10Q5GAN6 216 aaKnown RBP4.05□□□□□ -1.76
SMAD3-209ENST00000558894 GPR107Q5VW38 600 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 FAAP20Q6NZ36 180 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 CEMP1Q6PRD7 247 aaPredicted RBP4.05□□□□□ -1.76
SMAD3-209ENST00000558894 SELENOHQ8IZQ5 122 aaKnown RBP4.05□□□□□ -1.76
SMAD3-209ENST00000558894 TMEM230Q96A57 120 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 PINX1Q96BK5 328 aaKnown RBP4.05□□□□□ -1.76
SMAD3-209ENST00000558894 SOSTQ9BQB4 213 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 TMEM222Q9H0R3 208 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 MS4A6AQ9H2W1 248 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 GPR132Q9UNW8 380 aa4.05□□□□□ -1.76
SMAD3-209ENST00000558894 PUS1Q9Y606 427 aaKnown RBP eCLIP4.05□□□□□ -1.76
SMAD3-209ENST00000558894 TRAV2A0A0B4J234 112 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 IGHV3-66A0A0C4DH42 116 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 TEX13DA0A0J9YY54 714 aaPredicted RBP4.04□□□□□ -1.76
SMAD3-209ENST00000558894 K7EQG2 157 aa4.04□□□□□ -1.76
SMAD3-209ENST00000558894 CTDSPLO15194 276 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms