RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 MFSD2BA6NFX1 497 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 PMS2P5A8MQ11 134 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 K7EIM0 57 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 IGHV3-11P01762 117 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 SULT1A1P50225 295 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 EWSR1Q01844 656 aaKnown RBP eCLIP7.46□□□□□ -1.222e-6■■■■□ 23.1
CUX1-216ENST00000558469 ARL16Q0P5N6 197 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 ETFRF1Q6IPR1 90 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 STX12Q86Y82 276 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 TMEM217Q8N7C4 229 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 INO80EQ8NBZ0 244 aaPredicted RBP7.46□□□□□ -1.22
CUX1-216ENST00000558469 OR11H4Q8NGC9 324 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 OR10P1Q8NGE3 313 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 MYOZ3Q8TDC0 251 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 SCARB1Q8WTV0 552 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 WFDC12Q8WWY7 111 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 EEF1AKMT3Q96AZ1 226 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 CXorf58Q96LI9 332 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 OR5B12Q96R08 314 aa7.46□□□□□ -1.22
CUX1-216ENST00000558469 CITED2Q99967 270 aaPredicted RBP7.46□□□□□ -1.22
CUX1-216ENST00000558469 FNDC4Q9H6D8 234 aaPredicted RBP7.46□□□□□ -1.22
CUX1-216ENST00000558469 TRBV7-1A0A0A6YYK4 115 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 RPS10-NUDT3A0A1W2PQS6 291 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 A0A1W2PRX2 142 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 ANKRD34BA5PLL1 514 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 PRSS46E5RG02 174 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 C1QBP02746 253 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 GPX4P36969 197 aaPredicted RBP7.45□□□□□ -1.22
CUX1-216ENST00000558469 CDX1P47902 265 aaPredicted RBP7.45□□□□□ -1.22
CUX1-216ENST00000558469 AP2S1P53680 142 aaPredicted RBP7.45□□□□□ -1.22
CUX1-216ENST00000558469 RIPPLY3P57055 190 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 HBG1P69891 147 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 HBG2P69892 147 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 CD69Q07108 199 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 SLC38A11Q08AI6 406 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 ACSM6Q6P461 480 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 C18orf65Q6ZTR6 163 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 SLC16A13Q7RTY0 426 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 HAPLN4Q86UW8 402 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 LILRB2Q8N423 598 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 UBAC2Q8NBM4 344 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 VN1R17PQ8TDU5 208 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 BSCL2Q96G97 398 aaPredicted RBP7.45□□□□□ -1.22
CUX1-216ENST00000558469 UBE2E2Q96LR5 201 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 GNB4Q9HAV0 340 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 TNFSF18Q9UNG2 199 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 HSPB11Q9Y547 144 aa7.45□□□□□ -1.22
CUX1-216ENST00000558469 TSSC4Q9Y5U2 329 aaPredicted RBP7.45□□□□□ -1.22
CUX1-216ENST00000558469 SMCO3A2RU48 225 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 OR2T8A6NH00 312 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 HMSDA8MTL9 139 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 NUDT19A8MXV4 375 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 ARPC5O15511 151 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 SCAF4O95104 1147 aaKnown RBP7.44□□□□□ -1.22
CUX1-216ENST00000558469 S100A11P31949 105 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 RND2P52198 227 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 MFAP4P55083 255 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 DLK1P80370 383 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 BAXQ07812 192 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 GAMTQ14353 236 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 ZFP69Q49AA0 526 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 Q56UQ5 140 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 CLEC19AQ6UXS0 136 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 C12orf54Q6X4T0 127 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 ACOT7LQ6ZUV0 252 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 C3orf56Q8N813 242 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 KLHL30-AS1Q8NEE0 82 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 OR1S2Q8NGQ3 325 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 OR5C1Q8NGR4 320 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 ZNF502Q8TBZ5 544 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 CACNG8Q8WXS5 425 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 ACY3Q96HD9 319 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 SLC35E1Q96K37 410 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 CCDC140Q96MF4 163 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 AQP10Q96PS8 301 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 C21orf62Q9NYP8 219 aa7.44□□□□□ -1.22
CUX1-216ENST00000558469 MRPL36Q9P0J6 103 aaKnown RBP7.44□□□□□ -1.22
CUX1-216ENST00000558469 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.43□□□□□ -1.22
CUX1-216ENST00000558469 RNF222A6NCQ9 220 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 PPP5D1E7EU14 171 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 I3L521 148 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 CLEC3BP05452 202 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 LGALS1P09382 135 aaKnown RBP7.43□□□□□ -1.22
CUX1-216ENST00000558469 GPR183P32249 361 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 NPBWR1P48145 328 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 EIF2B2P49770 351 aaKnown RBP7.43□□□□□ -1.22
CUX1-216ENST00000558469 AKR1C1Q04828 323 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 CLINT1Q14677 625 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 NSUN5P1Q3KNT7 163 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 ZNF343Q6P1L6 599 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 OR4X1Q8NH49 305 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 C4orf3Q8WVX3 66 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 NPIPB3Q92617 1050 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 HYLS1Q96M11 299 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 TXN2Q99757 166 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 CITED1Q99966 193 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 GGACTQ9BVM4 153 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 SMIM3Q9BZL3 60 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 MFFQ9GZY8 342 aa7.43□□□□□ -1.22
CUX1-216ENST00000558469 PEF1Q9UBV8 284 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 527.6 ms