RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 VSIRQ9H7M9 311 aa10.45□□□□□ -0.74
SNX6-210ENST00000557341 C14orf166Q9Y224 244 aaKnown RBP10.45□□□□□ -0.74
SNX6-210ENST00000557341 A0A0G2JRQ6 117 aa10.44□□□□□ -0.74
SNX6-210ENST00000557341 MPTX1A8MV57 137 aa10.44□□□□□ -0.74
SNX6-210ENST00000557341 ETV6P41212 452 aa10.44□□□□□ -0.74
SNX6-210ENST00000557341 FAAP20Q6NZ36 180 aa10.44□□□□□ -0.74
SNX6-210ENST00000557341 GPR141Q7Z602 305 aa10.44□□□□□ -0.74
SNX6-210ENST00000557341 FAM219AQ8IW50 185 aa10.44□□□□□ -0.74
SNX6-210ENST00000557341 GATAD1Q8WUU5 269 aa10.44□□□□□ -0.74
SNX6-210ENST00000557341 MRPS26Q9BYN8 205 aaKnown RBP10.44□□□□□ -0.74
SNX6-210ENST00000557341 CSTL1Q9H114 145 aa10.44□□□□□ -0.74
SNX6-210ENST00000557341 MIXL1Q9H2W2 232 aa10.44□□□□□ -0.74
SNX6-210ENST00000557341 AGRNO00468 2067 aa10.44□□□□□ -0.74
SNX6-210ENST00000557341 TRAV2A0A0B4J234 112 aa10.43□□□□□ -0.74
SNX6-210ENST00000557341 DNASE2O00115 360 aaPredicted RBP10.43□□□□□ -0.74
SNX6-210ENST00000557341 CLN5O75503 358 aa10.43□□□□□ -0.74
SNX6-210ENST00000557341 TMEM50AO95807 157 aa10.43□□□□□ -0.74
SNX6-210ENST00000557341 APOHP02749 345 aaPredicted RBP10.43□□□□□ -0.74
SNX6-210ENST00000557341 OR5AC1P0C628 307 aa10.43□□□□□ -0.74
SNX6-210ENST00000557341 RPL11P62913 178 aaKnown RBP10.43□□□□□ -0.74
SNX6-210ENST00000557341 SURF2Q15527 256 aaPredicted RBP10.43□□□□□ -0.74
SNX6-210ENST00000557341 BSXQ3C1V8 233 aa10.43□□□□□ -0.74
SNX6-210ENST00000557341 CEMP1Q6PRD7 247 aaPredicted RBP10.43□□□□□ -0.74
SNX6-210ENST00000557341 SMIM4Q8WVI0 70 aa10.43□□□□□ -0.74
SNX6-210ENST00000557341 RBPMSQ93062 196 aaKnown RBP10.43□□□□□ -0.74
SNX6-210ENST00000557341 TMEM222Q9H0R3 208 aa10.43□□□□□ -0.74
SNX6-210ENST00000557341 MS4A6AQ9H2W1 248 aa10.43□□□□□ -0.74
SNX6-210ENST00000557341 FNDC4Q9H6D8 234 aaPredicted RBP10.43□□□□□ -0.74
SNX6-210ENST00000557341 KLK5Q9Y337 293 aaPredicted RBP10.43□□□□□ -0.74
SNX6-210ENST00000557341 IGHV3-66A0A0C4DH42 116 aa10.42□□□□□ -0.74
SNX6-210ENST00000557341 TEX13DA0A0J9YY54 714 aaPredicted RBP10.42□□□□□ -0.74
SNX6-210ENST00000557341 A0A1B0GU03 582 aa10.42□□□□□ -0.74
SNX6-210ENST00000557341 A0A1W2PS18 150 aa10.42□□□□□ -0.74
SNX6-210ENST00000557341 DISC1C4P0D8 188 aa10.42□□□□□ -0.74
SNX6-210ENST00000557341 DFFBO76075 338 aa10.42□□□□□ -0.74
SNX6-210ENST00000557341 CDS2O95674 445 aa10.42□□□□□ -0.74
SNX6-210ENST00000557341 LY6G6CO95867 125 aa10.42□□□□□ -0.74
SNX6-210ENST00000557341 HTR2BP41595 481 aa10.42□□□□□ -0.74
SNX6-210ENST00000557341 RPL5P46777 297 aaKnown RBP10.42□□□□□ -0.74
SNX6-210ENST00000557341 SPCS3P61009 180 aa10.42□□□□□ -0.74
SNX6-210ENST00000557341 AARDQ4LEZ3 155 aa10.42□□□□□ -0.74
SNX6-210ENST00000557341 OR4X1Q8NH49 305 aa10.42□□□□□ -0.74
SNX6-210ENST00000557341 METTL26Q96S19 204 aa10.42□□□□□ -0.74
SNX6-210ENST00000557341 NAA60Q9H7X0 242 aa10.42□□□□□ -0.74
SNX6-210ENST00000557341 MRPL36Q9P0J6 103 aaKnown RBP10.42□□□□□ -0.74
SNX6-210ENST00000557341 RPS10-NUDT3A0A1W2PQS6 291 aa10.41□□□□□ -0.74
SNX6-210ENST00000557341 CTDSP2O14595 271 aa10.41□□□□□ -0.74
SNX6-210ENST00000557341 AKAIN1P0CW23 69 aa10.41□□□□□ -0.74
SNX6-210ENST00000557341 NPPCP23582 126 aa10.41□□□□□ -0.74
SNX6-210ENST00000557341 ALDH3B2P48448 385 aa10.41□□□□□ -0.74
SNX6-210ENST00000557341 IL18Q14116 193 aa10.41□□□□□ -0.74
SNX6-210ENST00000557341 SPCS2Q15005 226 aa10.41□□□□□ -0.74
SNX6-210ENST00000557341 OR4C16Q8NGL9 310 aa10.41□□□□□ -0.74
SNX6-210ENST00000557341 OR52E5Q8NH55 327 aa10.41□□□□□ -0.74
SNX6-210ENST00000557341 LHFPL5Q8TAF8 219 aa10.41□□□□□ -0.74
SNX6-210ENST00000557341 GLYATL2Q8WU03 294 aa10.41□□□□□ -0.74
SNX6-210ENST00000557341 NARS2Q96I59 477 aaKnown RBP10.41□□□□□ -0.74
SNX6-210ENST00000557341 RARRES2Q99969 163 aa10.41□□□□□ -0.74
SNX6-210ENST00000557341 RTBDNQ9BSG5 229 aaPredicted RBP10.41□□□□□ -0.74
SNX6-210ENST00000557341 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.41□□□□□ -0.74
SNX6-210ENST00000557341 RABL2AQ9UBK7 228 aaPredicted RBP10.41□□□□□ -0.74
SNX6-210ENST00000557341 RABAC1Q9UI14 185 aa10.41□□□□□ -0.74
SNX6-210ENST00000557341 RABL2BQ9UNT1 228 aa10.41□□□□□ -0.74
SNX6-210ENST00000557341 TRAV30A0A087WSZ9 112 aa10.4□□□□□ -0.74
SNX6-210ENST00000557341 CRYM-AS1A6NIL9 109 aa10.4□□□□□ -0.74
SNX6-210ENST00000557341 CTDSPLO15194 276 aa10.4□□□□□ -0.74
SNX6-210ENST00000557341 CA1P00915 261 aaPredicted RBP10.4□□□□□ -0.74
SNX6-210ENST00000557341 DEFB131AP59861 70 aa10.4□□□□□ -0.74
SNX6-210ENST00000557341 DHODHQ02127 395 aa10.4□□□□□ -0.74
SNX6-210ENST00000557341 TMEM268Q5VZI3 342 aa10.4□□□□□ -0.74
SNX6-210ENST00000557341 LEMD1Q68G75 181 aa10.4□□□□□ -0.74
SNX6-210ENST00000557341 Q6ZRM9 215 aa10.4□□□□□ -0.74
SNX6-210ENST00000557341 LILRB2Q8N423 598 aa10.4□□□□□ -0.74
SNX6-210ENST00000557341 TMEM230Q96A57 120 aa10.4□□□□□ -0.74
SNX6-210ENST00000557341 PRRT1Q99946 306 aa10.4□□□□□ -0.74
SNX6-210ENST00000557341 C11orf68Q9H3H3 251 aaKnown RBP10.4□□□□□ -0.74
SNX6-210ENST00000557341 HEYLQ9NQ87 328 aaPredicted RBP10.4□□□□□ -0.74
SNX6-210ENST00000557341 CCDC59Q9P031 241 aaKnown RBP10.4□□□□□ -0.74
SNX6-210ENST00000557341 CACNG5Q9UF02 275 aa10.4□□□□□ -0.74
SNX6-210ENST00000557341 CRYBB3P26998 211 aa10.39□□□□□ -0.75
SNX6-210ENST00000557341 P2RY1P47900 373 aa10.39□□□□□ -0.75
SNX6-210ENST00000557341 CLVS1Q8IUQ0 354 aaPredicted RBP10.39□□□□□ -0.75
SNX6-210ENST00000557341 STHQ8IWL8 128 aa10.39□□□□□ -0.75
SNX6-210ENST00000557341 SELENOHQ8IZQ5 122 aaKnown RBP10.39□□□□□ -0.75
SNX6-210ENST00000557341 FAM24BQ8N5W8 94 aa10.39□□□□□ -0.75
SNX6-210ENST00000557341 SLC24A4Q8NFF2 622 aa10.39□□□□□ -0.75
SNX6-210ENST00000557341 STXBP6Q8NFX7 210 aa10.39□□□□□ -0.75
SNX6-210ENST00000557341 OR11H2Q8NH07 326 aa10.39□□□□□ -0.75
SNX6-210ENST00000557341 RNASEH2CQ8TDP1 164 aaKnown RBP10.39□□□□□ -0.75
SNX6-210ENST00000557341 RAB2BQ8WUD1 216 aa10.39□□□□□ -0.75
SNX6-210ENST00000557341 PHLDA1Q8WV24 401 aaPredicted RBP10.39□□□□□ -0.75
SNX6-210ENST00000557341 DIRAS2Q96HU8 199 aa10.39□□□□□ -0.75
SNX6-210ENST00000557341 CEBPZOSA8MTT3 80 aa10.38□□□□□ -0.75
SNX6-210ENST00000557341 IGKV1-17P01599 117 aa10.38□□□□□ -0.75
SNX6-210ENST00000557341 SLC25A4P12235 298 aa10.38□□□□□ -0.75
SNX6-210ENST00000557341 TMEM187Q14656 261 aa10.38□□□□□ -0.75
SNX6-210ENST00000557341 MLANAQ16655 118 aa10.38□□□□□ -0.75
SNX6-210ENST00000557341 TIGITQ495A1 244 aa10.38□□□□□ -0.75
SNX6-210ENST00000557341 C2orf83Q53S99 150 aa10.38□□□□□ -0.75
SNX6-210ENST00000557341 OR1S2Q8NGQ3 325 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms