RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 UCP1P25874 307 aa16.62■□□□□ 0.25
ACTN1-220ENST00000556433 RPL11P62913 178 aaKnown RBP16.62■□□□□ 0.25
ACTN1-220ENST00000556433 MLANAQ16655 118 aa16.62■□□□□ 0.25
ACTN1-220ENST00000556433 STEAP1BQ6NZ63 245 aa16.62■□□□□ 0.25
ACTN1-220ENST00000556433 MS4A6AQ9H2W1 248 aa16.62■□□□□ 0.25
ACTN1-220ENST00000556433 ZFAND3Q9H8U3 227 aa16.62■□□□□ 0.25
ACTN1-220ENST00000556433 KLK5Q9Y337 293 aaPredicted RBP16.62■□□□□ 0.25
ACTN1-220ENST00000556433 A0A0G2JRQ6 117 aa16.61■□□□□ 0.25
ACTN1-220ENST00000556433 A0A1B0GU03 582 aa16.61■□□□□ 0.25
ACTN1-220ENST00000556433 RARRES2Q99969 163 aa16.61■□□□□ 0.25
ACTN1-220ENST00000556433 MIXL1Q9H2W2 232 aa16.61■□□□□ 0.25
ACTN1-220ENST00000556433 GABARAPH6UMI1 98 aa16.6■□□□□ 0.25
ACTN1-220ENST00000556433 RGS5O15539 181 aa16.6■□□□□ 0.25
ACTN1-220ENST00000556433 CLN5O75503 358 aa16.6■□□□□ 0.25
ACTN1-220ENST00000556433 B3GALNT1O75752 331 aa16.6■□□□□ 0.25
ACTN1-220ENST00000556433 OPRK1P41145 380 aa16.6■□□□□ 0.25
ACTN1-220ENST00000556433 Q6ZRM9 215 aa16.6■□□□□ 0.25
ACTN1-220ENST00000556433 GATAD1Q8WUU5 269 aa16.6■□□□□ 0.25
ACTN1-220ENST00000556433 FNDC4Q9H6D8 234 aaPredicted RBP16.6■□□□□ 0.25
ACTN1-220ENST00000556433 TMEM231Q9H6L2 316 aa16.6■□□□□ 0.25
ACTN1-220ENST00000556433 MRPL36Q9P0J6 103 aaKnown RBP16.6■□□□□ 0.25
ACTN1-220ENST00000556433 NPPCP23582 126 aa16.59■□□□□ 0.25
ACTN1-220ENST00000556433 RPL5P46777 297 aaKnown RBP16.59■□□□□ 0.25
ACTN1-220ENST00000556433 DEFB131AP59861 70 aa16.59■□□□□ 0.25
ACTN1-220ENST00000556433 OR4X1Q8NH49 305 aa16.59■□□□□ 0.25
ACTN1-220ENST00000556433 C14orf166Q9Y224 244 aaKnown RBP16.59■□□□□ 0.25
ACTN1-220ENST00000556433 CTDSP2O14595 271 aa16.58■□□□□ 0.24
ACTN1-220ENST00000556433 CDS2O95674 445 aa16.58■□□□□ 0.24
ACTN1-220ENST00000556433 OR5AC1P0C628 307 aa16.58■□□□□ 0.24
ACTN1-220ENST00000556433 SPCS3P61009 180 aa16.58■□□□□ 0.24
ACTN1-220ENST00000556433 SSBP1Q04837 148 aaKnown RBP16.58■□□□□ 0.24
ACTN1-220ENST00000556433 MEF2DQ14814 521 aa16.58■□□□□ 0.24
ACTN1-220ENST00000556433 LEMD1Q68G75 181 aa16.58■□□□□ 0.24
ACTN1-220ENST00000556433 FAAP20Q6NZ36 180 aa16.58■□□□□ 0.24
ACTN1-220ENST00000556433 OR11H2Q8NH07 326 aa16.58■□□□□ 0.24
ACTN1-220ENST00000556433 PHLDA1Q8WV24 401 aaPredicted RBP16.58■□□□□ 0.24
ACTN1-220ENST00000556433 TMEM230Q96A57 120 aa16.58■□□□□ 0.24
ACTN1-220ENST00000556433 RTBDNQ9BSG5 229 aaPredicted RBP16.58■□□□□ 0.24
ACTN1-220ENST00000556433 TMEM222Q9H0R3 208 aa16.58■□□□□ 0.24
ACTN1-220ENST00000556433 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.58■□□□□ 0.24
ACTN1-220ENST00000556433 RABAC1Q9UI14 185 aa16.58■□□□□ 0.24
ACTN1-220ENST00000556433 TRAV2A0A0B4J234 112 aa16.57■□□□□ 0.24
ACTN1-220ENST00000556433 TEX13DA0A0J9YY54 714 aaPredicted RBP16.57■□□□□ 0.24
ACTN1-220ENST00000556433 A0A1W2PS18 150 aa16.57■□□□□ 0.24
ACTN1-220ENST00000556433 SCGB2A1O75556 95 aa16.57■□□□□ 0.24
ACTN1-220ENST00000556433 MRPS10P82664 201 aaKnown RBP16.57■□□□□ 0.24
ACTN1-220ENST00000556433 FAM219AQ8IW50 185 aa16.57■□□□□ 0.24
ACTN1-220ENST00000556433 FAM24BQ8N5W8 94 aa16.57■□□□□ 0.24
ACTN1-220ENST00000556433 METTL26Q96S19 204 aa16.57■□□□□ 0.24
ACTN1-220ENST00000556433 DISC1C4P0D8 188 aa16.56■□□□□ 0.24
ACTN1-220ENST00000556433 CA1P00915 261 aaPredicted RBP16.56■□□□□ 0.24
ACTN1-220ENST00000556433 BSXQ3C1V8 233 aa16.56■□□□□ 0.24
ACTN1-220ENST00000556433 GPR141Q7Z602 305 aa16.56■□□□□ 0.24
ACTN1-220ENST00000556433 SELENOHQ8IZQ5 122 aaKnown RBP16.56■□□□□ 0.24
ACTN1-220ENST00000556433 OR52E5Q8NH55 327 aa16.56■□□□□ 0.24
ACTN1-220ENST00000556433 GLYATL2Q8WU03 294 aa16.56■□□□□ 0.24
ACTN1-220ENST00000556433 NAA60Q9H7X0 242 aa16.56■□□□□ 0.24
ACTN1-220ENST00000556433 HTR2BP41595 481 aa16.55■□□□□ 0.24
ACTN1-220ENST00000556433 DHODHQ02127 395 aa16.55■□□□□ 0.24
ACTN1-220ENST00000556433 TIGITQ495A1 244 aa16.55■□□□□ 0.24
ACTN1-220ENST00000556433 AARDQ4LEZ3 155 aa16.55■□□□□ 0.24
ACTN1-220ENST00000556433 LHFPL5Q8TAF8 219 aa16.55■□□□□ 0.24
ACTN1-220ENST00000556433 GPR146Q96CH1 333 aa16.55■□□□□ 0.24
ACTN1-220ENST00000556433 MRPS26Q9BYN8 205 aaKnown RBP16.55■□□□□ 0.24
ACTN1-220ENST00000556433 HEYLQ9NQ87 328 aaPredicted RBP16.55■□□□□ 0.24
ACTN1-220ENST00000556433 TRAV30A0A087WSZ9 112 aa16.54■□□□□ 0.24
ACTN1-220ENST00000556433 RPS10-NUDT3A0A1W2PQS6 291 aa16.54■□□□□ 0.24
ACTN1-220ENST00000556433 IGKV1-17P01599 117 aa16.54■□□□□ 0.24
ACTN1-220ENST00000556433 CRYBB3P26998 211 aa16.54■□□□□ 0.24
ACTN1-220ENST00000556433 TMEM187Q14656 261 aa16.54■□□□□ 0.24
ACTN1-220ENST00000556433 SPCS2Q15005 226 aa16.54■□□□□ 0.24
ACTN1-220ENST00000556433 SURF2Q15527 256 aaPredicted RBP16.54■□□□□ 0.24
ACTN1-220ENST00000556433 STXBP6Q8NFX7 210 aa16.54■□□□□ 0.24
ACTN1-220ENST00000556433 RBPMSQ93062 196 aaKnown RBP16.54■□□□□ 0.24
ACTN1-220ENST00000556433 NARS2Q96I59 477 aaKnown RBP16.54■□□□□ 0.24
ACTN1-220ENST00000556433 CACNG5Q9UF02 275 aa16.54■□□□□ 0.24
ACTN1-220ENST00000556433 AKAIN1P0CW23 69 aa16.53■□□□□ 0.24
ACTN1-220ENST00000556433 P2RY1P47900 373 aa16.53■□□□□ 0.24
ACTN1-220ENST00000556433 ALDH3B2P48448 385 aa16.53■□□□□ 0.24
ACTN1-220ENST00000556433 NANOS2P60321 138 aaKnown RBP16.53■□□□□ 0.24
ACTN1-220ENST00000556433 TMEM268Q5VZI3 342 aa16.53■□□□□ 0.24
ACTN1-220ENST00000556433 STHQ8IWL8 128 aa16.53■□□□□ 0.24
ACTN1-220ENST00000556433 C11orf45Q8TAV5 145 aa16.53■□□□□ 0.24
ACTN1-220ENST00000556433 SMIM4Q8WVI0 70 aa16.53■□□□□ 0.24
ACTN1-220ENST00000556433 GPR132Q9UNW8 380 aa16.53■□□□□ 0.24
ACTN1-220ENST00000556433 K7EQG2 157 aa16.52■□□□□ 0.24
ACTN1-220ENST00000556433 OR4C16Q8NGL9 310 aa16.52■□□□□ 0.24
ACTN1-220ENST00000556433 DIRAS2Q96HU8 199 aa16.52■□□□□ 0.24
ACTN1-220ENST00000556433 CRYM-AS1A6NIL9 109 aa16.51■□□□□ 0.23
ACTN1-220ENST00000556433 CEBPZOSA8MTT3 80 aa16.51■□□□□ 0.23
ACTN1-220ENST00000556433 IL18Q14116 193 aa16.51■□□□□ 0.23
ACTN1-220ENST00000556433 RBMS2Q15434 407 aaKnown RBP16.51■□□□□ 0.23
ACTN1-220ENST00000556433 C2orf83Q53S99 150 aa16.51■□□□□ 0.23
ACTN1-220ENST00000556433 Q8WTZ3 238 aa16.51■□□□□ 0.23
ACTN1-220ENST00000556433 GRAMD2BQ96HH9 432 aa16.51■□□□□ 0.23
ACTN1-220ENST00000556433 MFFQ9GZY8 342 aa16.51■□□□□ 0.23
ACTN1-220ENST00000556433 C11orf68Q9H3H3 251 aaKnown RBP16.51■□□□□ 0.23
ACTN1-220ENST00000556433 FBXL17Q9UF56 701 aa16.51■□□□□ 0.23
ACTN1-220ENST00000556433 CTDSPLO15194 276 aa16.5■□□□□ 0.23
ACTN1-220ENST00000556433 DEFB4AO15263 64 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms