RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 NDUFA6P56556 154 aa13.96□□□□□ -0.17
SHOX-204ENST00000554971 VKORC1L1Q8N0U8 176 aa13.96□□□□□ -0.17
SHOX-204ENST00000554971 ABHD12Q8N2K0 398 aa13.96□□□□□ -0.17
SHOX-204ENST00000554971 KIR3DL3Q8N743 410 aa13.96□□□□□ -0.17
SHOX-204ENST00000554971 MGST2Q99735 147 aa13.96□□□□□ -0.17
SHOX-204ENST00000554971 PXMP4Q9Y6I8 212 aa13.96□□□□□ -0.17
SHOX-204ENST00000554971 PPP1R2P9O14990 202 aa13.96□□□□□ -0.18
SHOX-204ENST00000554971 HMGB3O15347 200 aaKnown RBP13.96□□□□□ -0.18
SHOX-204ENST00000554971 TOX4O94842 621 aa13.96□□□□□ -0.18
SHOX-204ENST00000554971 FSHBP01225 129 aa13.96□□□□□ -0.18
SHOX-204ENST00000554971 S100A2P29034 98 aa13.96□□□□□ -0.18
SHOX-204ENST00000554971 RPS16P62249 146 aaKnown RBP13.96□□□□□ -0.18
SHOX-204ENST00000554971 VMO1Q7Z5L0 202 aa13.96□□□□□ -0.18
SHOX-204ENST00000554971 C8orf31Q8N9H6 132 aa13.96□□□□□ -0.18
SHOX-204ENST00000554971 OR51G1Q8NGK1 321 aa13.96□□□□□ -0.18
SHOX-204ENST00000554971 TMEM170AQ8WVE7 144 aa13.96□□□□□ -0.18
SHOX-204ENST00000554971 ZNF714Q96N38 554 aa13.96□□□□□ -0.18
SHOX-204ENST00000554971 IMMP2LQ96T52 175 aa13.96□□□□□ -0.18
SHOX-204ENST00000554971 GAR1Q9NY12 217 aaKnown RBP13.96□□□□□ -0.18
SHOX-204ENST00000554971 BET1LQ9NYM9 111 aa13.96□□□□□ -0.18
SHOX-204ENST00000554971 M0R1W7 72 aa13.95□□□□□ -0.18
SHOX-204ENST00000554971 UPK2O00526 184 aa13.95□□□□□ -0.18
SHOX-204ENST00000554971 MT-CO2P00403 227 aa13.95□□□□□ -0.18
SHOX-204ENST00000554971 IGHV4-38-2P0DP08 117 aa13.95□□□□□ -0.18
SHOX-204ENST00000554971 PRCDQ00LT1 54 aa13.95□□□□□ -0.18
SHOX-204ENST00000554971 UTF1Q5T230 341 aa13.95□□□□□ -0.18
SHOX-204ENST00000554971 FAM71F2Q6NXP2 309 aa13.95□□□□□ -0.18
SHOX-204ENST00000554971 C1orf122Q6ZSJ8 110 aa13.95□□□□□ -0.18
SHOX-204ENST00000554971 C16orf82Q7Z2V1 217 aa13.95□□□□□ -0.18
SHOX-204ENST00000554971 OR5B3Q8NH48 314 aa13.95□□□□□ -0.18
SHOX-204ENST00000554971 OSR1Q8TAX0 266 aaPredicted RBP13.95□□□□□ -0.18
SHOX-204ENST00000554971 OR51M1Q9H341 326 aa13.95□□□□□ -0.18
SHOX-204ENST00000554971 OR51B2Q9Y5P1 312 aa13.95□□□□□ -0.18
SHOX-204ENST00000554971 ARL2-SNX15V9GYD0 113 aa13.95□□□□□ -0.18
SHOX-204ENST00000554971 RHOBP62745 196 aa13.94□□□□□ -0.18
SHOX-204ENST00000554971 DNLZQ5SXM8 178 aa13.94□□□□□ -0.18
SHOX-204ENST00000554971 ZNF833PQ6ZTB9 187 aa13.94□□□□□ -0.18
SHOX-204ENST00000554971 LURAP1LQ8IV03 231 aa13.94□□□□□ -0.18
SHOX-204ENST00000554971 PHOX2AO14813 284 aa13.94□□□□□ -0.18
SHOX-204ENST00000554971 CT45A6P0DMU7 189 aa13.94□□□□□ -0.18
SHOX-204ENST00000554971 CT45A5P0DMU8 189 aa13.94□□□□□ -0.18
SHOX-204ENST00000554971 CT45A7P0DMV0 189 aa13.94□□□□□ -0.18
SHOX-204ENST00000554971 GALR1P47211 349 aa13.94□□□□□ -0.18
SHOX-204ENST00000554971 CTAG1AP78358 180 aa13.94□□□□□ -0.18
SHOX-204ENST00000554971 SSX2Q16385 188 aa13.94□□□□□ -0.18
SHOX-204ENST00000554971 HCP5Q6MZN7 132 aa13.94□□□□□ -0.18
SHOX-204ENST00000554971 LEAP2Q969E1 77 aa13.94□□□□□ -0.18
SHOX-204ENST00000554971 C19orf24Q9BVV8 132 aa13.94□□□□□ -0.18
SHOX-204ENST00000554971 SLC35D1Q9NTN3 355 aa13.94□□□□□ -0.18
SHOX-204ENST00000554971 TRAV40A0A0B4J280 105 aa13.93□□□□□ -0.18
SHOX-204ENST00000554971 INS-IGF2F8WCM5 200 aa13.93□□□□□ -0.18
SHOX-204ENST00000554971 J3QR06 171 aa13.93□□□□□ -0.18
SHOX-204ENST00000554971 IGHV3-7P01780 117 aa13.93□□□□□ -0.18
SHOX-204ENST00000554971 TRGC1P0CF51 173 aa13.93□□□□□ -0.18
SHOX-204ENST00000554971 HOXB4P17483 251 aaPredicted RBP13.93□□□□□ -0.18
SHOX-204ENST00000554971 PRTN3P24158 256 aa13.93□□□□□ -0.18
SHOX-204ENST00000554971 FAM3BP58499 235 aaPredicted RBP13.93□□□□□ -0.18
SHOX-204ENST00000554971 B2MP61769 119 aa13.93□□□□□ -0.18
SHOX-204ENST00000554971 KLRD1Q13241 179 aa13.93□□□□□ -0.18
SHOX-204ENST00000554971 KCNIP4Q6PIL6 250 aa13.93□□□□□ -0.18
SHOX-204ENST00000554971 SLC16A13Q7RTY0 426 aa13.93□□□□□ -0.18
SHOX-204ENST00000554971 ABHD5Q8WTS1 349 aa13.93□□□□□ -0.18
SHOX-204ENST00000554971 GATAD1Q8WUU5 269 aa13.93□□□□□ -0.18
SHOX-204ENST00000554971 PLEKHA3Q9HB20 300 aa13.93□□□□□ -0.18
SHOX-204ENST00000554971 NIT2Q9NQR4 276 aa13.93□□□□□ -0.18
SHOX-204ENST00000554971 PITPNC1Q9UKF7 332 aa13.93□□□□□ -0.18
SHOX-204ENST00000554971 IGHV3OR16-10A0A075B7F0 116 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 CENPVL3A0A0U1RRI6 287 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 GGCTO75223 188 aaKnown RBP13.92□□□□□ -0.18
SHOX-204ENST00000554971 CA2P00918 260 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 TYMSP04818 313 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 IGHV1-8P0DP01 117 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 C2orf83Q53S99 150 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 OR4A5Q8NH83 315 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 PPP5D1E7EU14 171 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 APOA2P02652 100 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 RBP4P02753 201 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 ARSJQ5FYB0 599 aaPredicted RBP13.92□□□□□ -0.18
SHOX-204ENST00000554971 MIC13Q5XKP0 118 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 TMEM144Q7Z5S9 345 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 PNKDQ8N490 385 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 LINC00311Q8N616 119 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 OR1L8Q8NGR8 309 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 ZNF596Q8TC21 504 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 FRZBQ92765 325 aa13.92□□□□□ -0.18
SHOX-204ENST00000554971 PRR20EP86478 221 aa13.91□□□□□ -0.18
SHOX-204ENST00000554971 PRR20CP86479 221 aa13.91□□□□□ -0.18
SHOX-204ENST00000554971 PRR20DP86480 221 aa13.91□□□□□ -0.18
SHOX-204ENST00000554971 PRR20BP86481 221 aa13.91□□□□□ -0.18
SHOX-204ENST00000554971 PRR20AP86496 221 aa13.91□□□□□ -0.18
SHOX-204ENST00000554971 CST9LP1Q5W188 147 aa13.91□□□□□ -0.18
SHOX-204ENST00000554971 SLC35E1Q96K37 410 aa13.91□□□□□ -0.18
SHOX-204ENST00000554971 CDC42EP3Q9UKI2 254 aa13.91□□□□□ -0.18
SHOX-204ENST00000554971 SOX21Q9Y651 276 aaPredicted RBP13.91□□□□□ -0.18
SHOX-204ENST00000554971 FABP1P07148 127 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 NPPCP23582 126 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 GNB1P62873 340 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 GCSAMLQ5JQS6 135 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 BRD3OSQ6XYD6 125 aa13.9□□□□□ -0.18
SHOX-204ENST00000554971 LINC01551Q86U37 167 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms