RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 UBE2CO00762 179 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 TCRBP04435 133 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 SLC25A6P12236 298 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 BTCP35070 178 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 ADMP35318 185 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 APOC4P55056 127 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 RELQ04864 619 aaPredicted RBP4.92□□□□□ -1.62
SLIRP-203ENST00000554074 TRIM16LQ309B1 348 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 LAMTOR1Q6IAA8 161 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 H2BFWTQ7Z2G1 175 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 KIR2DL5AQ8N109 375 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 LGI3Q8N145 548 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 KIR2DL5BQ8NHK3 375 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 GLYATL2Q8WU03 294 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 RRNAD1Q96FB5 475 aaKnown RBP4.92□□□□□ -1.62
SLIRP-203ENST00000554074 SEC22AQ96IW7 307 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 TP53RKQ96S44 253 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 TXN2Q99757 166 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 OVOL2Q9BRP0 275 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 SHPKQ9UHJ6 478 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 DNAH1Q9P2D7 4330 aa4.92□□□□□ -1.62
SLIRP-203ENST00000554074 IGHV3-35A0A0C4DH35 117 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 OR4C46A6NHA9 309 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 INS-IGF2F8WCM5 200 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 I3L2K1 104 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 NUPL2O15504 423 aaKnown RBP4.91□□□□□ -1.62
SLIRP-203ENST00000554074 PRAF2O60831 178 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 SFT2D2O95562 160 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 PTTG1O95997 202 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 IL5P05113 134 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 CD5P06127 495 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 CTSGP08311 255 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 OR5AC1P0C628 307 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 P0C879 139 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 AKR1C4P17516 323 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 PI3P19957 117 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 BMI1P35226 326 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 CCR6P51684 374 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 MFAP4P55083 255 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 CMC4P56277 68 aaPredicted RBP4.91□□□□□ -1.62
SLIRP-203ENST00000554074 PRR20EP86478 221 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 PRR20CP86479 221 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 PRR20DP86480 221 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 PRR20BP86481 221 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 PRR20AP86496 221 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 PRCDQ00LT1 54 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 TNFRSF9Q07011 255 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 TMEM187Q14656 261 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 AARDQ4LEZ3 155 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 TMED4Q7Z7H5 227 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 OR52E5Q8NH55 327 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 COQ8AQ8NI60 647 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 ENKURQ8TC29 256 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 TMEM230Q96A57 120 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 OR10C1Q96KK4 312 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 CHRDL1Q9BU40 450 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 HINT2Q9BX68 163 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 C20orf85Q9H1P6 137 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 SMPXQ9UHP9 88 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 TBC1D24Q9ULP9 559 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 NSG2Q9Y328 171 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 TMED3Q9Y3Q3 217 aa4.91□□□□□ -1.62
SLIRP-203ENST00000554074 IGHV7-4-1A0A0J9YVY3 117 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 A0A1B0GU03 582 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 LINC00854A0A1B0GVQ3 168 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 C9orf170A2RU37 121 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 NUPR2A6NF83 97 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 DBX1A6NMT0 343 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 SPRY2O43597 315 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 IGKV1-39P01597 117 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 IGKV1D-39P04432 117 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 H2AFB2P0C5Z0 115 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 OR4E1P0C645 316 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 AKR1C2P52895 323 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 ATP5IP56385 69 aaPredicted RBP4.9□□□□□ -1.63
SLIRP-203ENST00000554074 HSPE1P61604 102 aaKnown RBP4.9□□□□□ -1.63
SLIRP-203ENST00000554074 SUPT4H1P63272 117 aaKnown RBP4.9□□□□□ -1.63
SLIRP-203ENST00000554074 ERHP84090 104 aaKnown RBP4.9□□□□□ -1.63
SLIRP-203ENST00000554074 ODF3L2Q3SX64 289 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 Q56UQ5 140 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 PVRIGQ6DKI7 326 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 LYG2Q86SG7 212 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 SELENOHQ8IZQ5 122 aaKnown RBP4.9□□□□□ -1.63
SLIRP-203ENST00000554074 STPG3Q8N7X2 389 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 OR4A16Q8NH70 328 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 RNASE11Q8TAA1 199 aaKnown RBP4.9□□□□□ -1.63
SLIRP-203ENST00000554074 RNF183Q96D59 192 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 ZNF414Q96IQ9 312 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 MARVELD1Q9BSK0 173 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 C20orf24Q9BUV8 137 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 GPN1Q9HCN4 374 aaPredicted RBP4.9□□□□□ -1.63
SLIRP-203ENST00000554074 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.9□□□□□ -1.63
SLIRP-203ENST00000554074 NUDT15Q9NV35 164 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 SELENOKQ9Y6D0 94 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 ALMS1Q8TCU4 4167 aa4.9□□□□□ -1.63
SLIRP-203ENST00000554074 IGHV3-21A0A0B4J1V1 117 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 TRAV2A0A0B4J234 112 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 SNRPGP15A8MWD9 76 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 FAM90A26D6RGX4 464 aa4.89□□□□□ -1.63
SLIRP-203ENST00000554074 CORTO00230 105 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms