RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 OR5AC1P0C628 307 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 RNASE2P10153 161 aaKnown RBP6.94□□□□□ -1.3
YBX3-218ENST00000546298 RPL35AP18077 110 aaKnown RBP6.94□□□□□ -1.3
YBX3-218ENST00000546298 NPPCP23582 126 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 OPRK1P41145 380 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 HTR2BP41595 481 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 TFPI2P48307 235 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 TNFRSF9Q07011 255 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 SPCS2Q15005 226 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 PVRIGQ6DKI7 326 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 TCF24Q7RTU0 167 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 GLYATL2Q8WU03 294 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 RBPMSQ93062 196 aaKnown RBP6.94□□□□□ -1.3
YBX3-218ENST00000546298 RNF183Q96D59 192 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 NARS2Q96I59 477 aaKnown RBP6.94□□□□□ -1.3
YBX3-218ENST00000546298 NAA60Q9H7X0 242 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 MAP6D1Q9H9H5 199 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 CCDC59Q9P031 241 aaKnown RBP6.94□□□□□ -1.3
YBX3-218ENST00000546298 RSL24D1Q9UHA3 163 aaKnown RBP6.94□□□□□ -1.3
YBX3-218ENST00000546298 SCP2D1Q9UJQ7 156 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 GPR132Q9UNW8 380 aa6.94□□□□□ -1.3
YBX3-218ENST00000546298 PUS1Q9Y606 427 aaKnown RBP eCLIP6.94□□□□□ -1.3
YBX3-218ENST00000546298 IGKV3-7A0A075B6H7 116 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 IGHV3OR16-13A0A075B7E8 117 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 IGHV3-74A0A0B4J1X5 117 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 TRAV2A0A0B4J234 112 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 PIGBOS1A0A0B4J2F0 54 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 CXorf65A6NEN9 183 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 MPTX1A8MV57 137 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 DFFBO76075 338 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 SLC25A4P12235 298 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 ATF4P18848 351 aaPredicted RBP6.93□□□□□ -1.3
YBX3-218ENST00000546298 RPL11P62913 178 aaKnown RBP6.93□□□□□ -1.3
YBX3-218ENST00000546298 DEFB135Q30KP9 77 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 AARDQ4LEZ3 155 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 FAM90A2PQ658T7 463 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 ETFRF1Q6IPR1 90 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 LYG2Q86SG7 212 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 NOXA1Q86UR1 476 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 GBGT1Q8N5D6 347 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 OR4X1Q8NH49 305 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 TMEM230Q96A57 120 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 METTL26Q96S19 204 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 RTBDNQ9BSG5 229 aaPredicted RBP6.93□□□□□ -1.3
YBX3-218ENST00000546298 CSTL1Q9H114 145 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 VSIRQ9H7M9 311 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 HEYLQ9NQ87 328 aaPredicted RBP6.93□□□□□ -1.3
YBX3-218ENST00000546298 CACNG5Q9UF02 275 aa6.93□□□□□ -1.3
YBX3-218ENST00000546298 A0A0G2JRQ6 117 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 A0A0J9YWU9 116 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 NUPR2A6NF83 97 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 CRYM-AS1A6NIL9 109 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 CEBPZOSA8MTT3 80 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 GSTZ1O43708 216 aaPredicted RBP6.92□□□□□ -1.3
YBX3-218ENST00000546298 BSXQ3C1V8 233 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 TMEM268Q5VZI3 342 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 FAAP20Q6NZ36 180 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 Q6ZRM9 215 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 APRG1Q8IVJ8 170 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 SELENOHQ8IZQ5 122 aaKnown RBP6.92□□□□□ -1.3
YBX3-218ENST00000546298 OR51S1Q8NGJ8 323 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 OR4C16Q8NGL9 310 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 DYNC2LI1Q8TCX1 351 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 RNASEH2CQ8TDP1 164 aaKnown RBP6.92□□□□□ -1.3
YBX3-218ENST00000546298 GATAD1Q8WUU5 269 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 ST8SIA2Q92186 375 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 IL22RA2Q969J5 263 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 GPR146Q96CH1 333 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 GRAMD2BQ96HH9 432 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 ZNF414Q96IQ9 312 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 FNDC4Q9H6D8 234 aaPredicted RBP6.92□□□□□ -1.3
YBX3-218ENST00000546298 TMEM56-RWDD3S4R434 201 aa6.92□□□□□ -1.3
YBX3-218ENST00000546298 TENM2Q9NT68 2774 aa6.91□□□□□ -1.3
YBX3-218ENST00000546298 A0A1B0GU03 582 aa6.91□□□□□ -1.3
YBX3-218ENST00000546298 FABP12A6NFH5 140 aa6.91□□□□□ -1.3
YBX3-218ENST00000546298 ANXA3P12429 323 aa6.91□□□□□ -1.3
YBX3-218ENST00000546298 FAUP35544 74 aaKnown RBP6.91□□□□□ -1.3
YBX3-218ENST00000546298 EIF2B2P49770 351 aaKnown RBP6.91□□□□□ -1.3
YBX3-218ENST00000546298 SRPXP78539 464 aa6.91□□□□□ -1.3
YBX3-218ENST00000546298 C2orf83Q53S99 150 aa6.91□□□□□ -1.3
YBX3-218ENST00000546298 SLC24A4Q8NFF2 622 aa6.91□□□□□ -1.3
YBX3-218ENST00000546298 OR1S2Q8NGQ3 325 aa6.91□□□□□ -1.3
YBX3-218ENST00000546298 Q8WTZ3 238 aa6.91□□□□□ -1.3
YBX3-218ENST00000546298 MS4A6AQ9H2W1 248 aa6.91□□□□□ -1.3
YBX3-218ENST00000546298 ZFAND3Q9H8U3 227 aa6.91□□□□□ -1.3
YBX3-218ENST00000546298 MCUBQ9NWR8 336 aa6.91□□□□□ -1.3
YBX3-218ENST00000546298 RABAC1Q9UI14 185 aa6.91□□□□□ -1.3
YBX3-218ENST00000546298 KLK5Q9Y337 293 aaPredicted RBP6.91□□□□□ -1.3
YBX3-218ENST00000546298 A0A0B4J2A0 478 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 IGHV3-66A0A0C4DH42 116 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 ANKRD20A5PA0PJZ0 165 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 APOHP02749 345 aaPredicted RBP6.9□□□□□ -1.3
YBX3-218ENST00000546298 SULT1A3P0DMM9 295 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 SULT1A4P0DMN0 295 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 CRYBB3P26998 211 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 TNFSF8P32971 234 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 CCR6P51684 374 aa6.9□□□□□ -1.3
YBX3-218ENST00000546298 AP2S1P53680 142 aaPredicted RBP6.9□□□□□ -1.3
YBX3-218ENST00000546298 ATP5IP56385 69 aaPredicted RBP6.9□□□□□ -1.3
YBX3-218ENST00000546298 AP3S2P59780 193 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms