RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	ZNF57	Q68EA5	555 aa	Predicted RBP	5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	SLC25A24	Q6NUK1	477 aa		5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	UNQ9165/PRO28630	Q6UXU0	137 aa		5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	TMEM61	Q8N0U2	210 aa		5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	ZFAND1	Q8TCF1	268 aa		5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	SCARB1	Q8WTV0	552 aa		5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	CACNG8	Q8WXS5	425 aa		5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	ISOC1	Q96CN7	298 aa		5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	DIRAS2	Q96HU8	199 aa		5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	TP53RK	Q96S44	253 aa		5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	NEURL2	Q9BR09	285 aa		5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	SLIRP	Q9GZT3	109 aa	Known RBP	5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	PLEKHA3	Q9HB20	300 aa		5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	DAZ1	Q9NQZ3	744 aa	Known RBP	5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	GAR1	Q9NY12	217 aa	Known RBP	5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	C21orf62	Q9NYP8	219 aa		5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	COPZ2	Q9P299	210 aa		5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	MLX	Q9UH92	298 aa		5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	UFC1	Q9Y3C8	167 aa		5.77	□□□□□ -1.49
SNHG1-223	ENST00000545440	TRAV25	A0A0B4J276	109 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	C3orf85	A0A1B0GTC6	90 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	OR2T8	A6NH00	312 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	DISC1	C4P0D8	188 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	INS-IGF2	F8WCM5	200 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	C3orf84	H3BNL1	204 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	NDUFA4	O00483	81 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	GSTZ1	O43708	216 aa	Predicted RBP	5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	IGKV1-5	P01602	117 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	AKAIN1	P0CW23	69 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	HSPE1	P61604	102 aa	Known RBP	5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	GUCA2B	Q16661	112 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	IGFL4	Q6B9Z1	124 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	FAAP20	Q6NZ36	180 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	BTNL8	Q6UX41	500 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	SLC16A13	Q7RTY0	426 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	UXS1	Q8NBZ7	420 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	OR4C16	Q8NGL9	310 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	MARCH1	Q8TCQ1	289 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	PRRT1	Q99946	306 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	C6orf62	Q9GZU0	229 aa	Predicted RBP	5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	TUBA4B	Q9H853	241 aa		5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	MRPL27	Q9P0M9	148 aa	Known RBP	5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	C14orf166	Q9Y224	244 aa	Known RBP	5.76	□□□□□ -1.49
SNHG1-223	ENST00000545440	C15orf62	A8K5M9	175 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440		I3L2K1	104 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	CORT	O00230	105 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	CD7	P09564	240 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	ERH	P84090	104 aa	Known RBP	5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	REL	Q04864	619 aa	Predicted RBP	5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	HAGH	Q16775	308 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	TRIM16L	Q309B1	348 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	ANKRD55	Q3KP44	614 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	AARD	Q4LEZ3	155 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440		Q56UQ5	140 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	LINC00322	Q6ZN03	302 aa	Predicted RBP	5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	FAM219A	Q8IW50	185 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	SLC35G3	Q8N808	338 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	UBAC2	Q8NBM4	344 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	MUC7	Q8TAX7	377 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	NPIPB3	Q92617	1050 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	RRNAD1	Q96FB5	475 aa	Known RBP	5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	TXN2	Q99757	166 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	CHRDL1	Q9BU40	450 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	PDCD10	Q9BUL8	212 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	NXF2	Q9GZY0	626 aa	Known RBP	5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	TMEM222	Q9H0R3	208 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	C5orf66	Q9H5L9	145 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	NAA60	Q9H7X0	242 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	RSL24D1	Q9UHA3	163 aa	Known RBP	5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	CEPT1	Q9Y6K0	416 aa		5.75	□□□□□ -1.49
SNHG1-223	ENST00000545440	IGHV3-21	A0A0B4J1V1	117 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440		A0A0B4J293	547 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	IGHV3-35	A0A0C4DH35	117 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	ANKRD20A5P	A0PJZ0	165 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	CRYM-AS1	A6NIL9	109 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	OR11H12	B2RN74	326 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440		K7EMT4	169 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	NUPL2	O15504	423 aa	Known RBP	5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	ST8SIA3	O43173	380 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	CDS2	O95674	445 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	CTSG	P08311	255 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	OR5AC1	P0C628	307 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	MFAP4	P55083	255 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	IZUMO4	Q1ZYL8	232 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	SP6	Q3SY56	376 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	PVRIG	Q6DKI7	326 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	RBPMS2	Q6ZRY4	209 aa	Known RBP	5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	OR51S1	Q8NGJ8	323 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	OR52B4	Q8NGK2	314 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	MCFD2	Q8NI22	146 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	RNASE11	Q8TAA1	199 aa	Known RBP	5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	RBPMS	Q93062	196 aa	Known RBP	5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	SPAG8	Q99932	426 aa	Predicted RBP	5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	SOST	Q9BQB4	213 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	RTBDN	Q9BSG5	229 aa	Predicted RBP	5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	WFDC10A	Q9H1F0	79 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	SRD5A3	Q9H8P0	318 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	EDA2R	Q9HAV5	297 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	SCP2D1	Q9UJQ7	156 aa		5.74	□□□□□ -1.49
SNHG1-223	ENST00000545440	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.74	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms