RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ENY2Q9NPA8 101 aa12.36□□□□□ -0.43
CPSF1-207ENST00000531727 TRAV2A0A0B4J234 112 aa12.35□□□□□ -0.43
CPSF1-207ENST00000531727 IGHV3-66A0A0C4DH42 116 aa12.35□□□□□ -0.43
CPSF1-207ENST00000531727 A0A0G2JRQ6 117 aa12.35□□□□□ -0.43
CPSF1-207ENST00000531727 GABARAPH6UMI1 98 aa12.35□□□□□ -0.43
CPSF1-207ENST00000531727 DNASE2O00115 360 aaPredicted RBP12.35□□□□□ -0.43
CPSF1-207ENST00000531727 DFFBO76075 338 aa12.35□□□□□ -0.43
CPSF1-207ENST00000531727 GPR107Q5VW38 600 aa12.35□□□□□ -0.43
CPSF1-207ENST00000531727 STEAP1BQ6NZ63 245 aa12.35□□□□□ -0.43
CPSF1-207ENST00000531727 RNASE11Q8TAA1 199 aaKnown RBP12.35□□□□□ -0.43
CPSF1-207ENST00000531727 MARCH1Q8TCQ1 289 aa12.35□□□□□ -0.43
CPSF1-207ENST00000531727 RARRES2Q99969 163 aa12.35□□□□□ -0.43
CPSF1-207ENST00000531727 FNDC4Q9H6D8 234 aaPredicted RBP12.35□□□□□ -0.43
CPSF1-207ENST00000531727 MRPL36Q9P0J6 103 aaKnown RBP12.35□□□□□ -0.43
CPSF1-207ENST00000531727 CLN5O75503 358 aa12.34□□□□□ -0.43
CPSF1-207ENST00000531727 NPPCP23582 126 aa12.34□□□□□ -0.43
CPSF1-207ENST00000531727 OPRK1P41145 380 aa12.34□□□□□ -0.43
CPSF1-207ENST00000531727 RPL5P46777 297 aaKnown RBP12.34□□□□□ -0.43
CPSF1-207ENST00000531727 RPL11P62913 178 aaKnown RBP12.34□□□□□ -0.43
CPSF1-207ENST00000531727 SSBP1Q04837 148 aaKnown RBP12.34□□□□□ -0.43
CPSF1-207ENST00000531727 BSXQ3C1V8 233 aa12.34□□□□□ -0.43
CPSF1-207ENST00000531727 FAM219AQ8IW50 185 aa12.34□□□□□ -0.43
CPSF1-207ENST00000531727 OR4X1Q8NH49 305 aa12.34□□□□□ -0.43
CPSF1-207ENST00000531727 PHLDA1Q8WV24 401 aaPredicted RBP12.34□□□□□ -0.43
CPSF1-207ENST00000531727 MIXL1Q9H2W2 232 aa12.34□□□□□ -0.43
CPSF1-207ENST00000531727 CA1P00915 261 aaPredicted RBP12.33□□□□□ -0.44
CPSF1-207ENST00000531727 DEFB131AP59861 70 aa12.33□□□□□ -0.44
CPSF1-207ENST00000531727 SPCS3P61009 180 aa12.33□□□□□ -0.44
CPSF1-207ENST00000531727 MRPS10P82664 201 aaKnown RBP12.33□□□□□ -0.44
CPSF1-207ENST00000531727 MLANAQ16655 118 aa12.33□□□□□ -0.44
CPSF1-207ENST00000531727 AARDQ4LEZ3 155 aa12.33□□□□□ -0.44
CPSF1-207ENST00000531727 Q6ZRM9 215 aa12.33□□□□□ -0.44
CPSF1-207ENST00000531727 FAM24BQ8N5W8 94 aa12.33□□□□□ -0.44
CPSF1-207ENST00000531727 TMEM222Q9H0R3 208 aa12.33□□□□□ -0.44
CPSF1-207ENST00000531727 C11orf68Q9H3H3 251 aaKnown RBP12.33□□□□□ -0.44
CPSF1-207ENST00000531727 C14orf166Q9Y224 244 aaKnown RBP12.33□□□□□ -0.44
CPSF1-207ENST00000531727 A0A1W2PS18 150 aa12.32□□□□□ -0.44
CPSF1-207ENST00000531727 RGS5O15539 181 aa12.32□□□□□ -0.44
CPSF1-207ENST00000531727 SCGB2A1O75556 95 aa12.32□□□□□ -0.44
CPSF1-207ENST00000531727 CDS2O95674 445 aa12.32□□□□□ -0.44
CPSF1-207ENST00000531727 OR5AC1P0C628 307 aa12.32□□□□□ -0.44
CPSF1-207ENST00000531727 CRYBB3P26998 211 aa12.32□□□□□ -0.44
CPSF1-207ENST00000531727 MEF2DQ14814 521 aa12.32□□□□□ -0.44
CPSF1-207ENST00000531727 LEMD1Q68G75 181 aa12.32□□□□□ -0.44
CPSF1-207ENST00000531727 FAAP20Q6NZ36 180 aa12.32□□□□□ -0.44
CPSF1-207ENST00000531727 OR11H2Q8NH07 326 aa12.32□□□□□ -0.44
CPSF1-207ENST00000531727 OR52E5Q8NH55 327 aa12.32□□□□□ -0.44
CPSF1-207ENST00000531727 GLYATL2Q8WU03 294 aa12.32□□□□□ -0.44
CPSF1-207ENST00000531727 METTL26Q96S19 204 aa12.32□□□□□ -0.44
CPSF1-207ENST00000531727 RTBDNQ9BSG5 229 aaPredicted RBP12.32□□□□□ -0.44
CPSF1-207ENST00000531727 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.32□□□□□ -0.44
CPSF1-207ENST00000531727 RABAC1Q9UI14 185 aa12.32□□□□□ -0.44
CPSF1-207ENST00000531727 KMT2AQ03164 3969 aa12.31□□□□□ -0.44
CPSF1-207ENST00000531727 TEX13DA0A0J9YY54 714 aaPredicted RBP12.31□□□□□ -0.44
CPSF1-207ENST00000531727 HTR2BP41595 481 aa12.31□□□□□ -0.44
CPSF1-207ENST00000531727 SURF2Q15527 256 aaPredicted RBP12.31□□□□□ -0.44
CPSF1-207ENST00000531727 LHFPL5Q8TAF8 219 aa12.31□□□□□ -0.44
CPSF1-207ENST00000531727 RBPMSQ93062 196 aaKnown RBP12.31□□□□□ -0.44
CPSF1-207ENST00000531727 TMEM230Q96A57 120 aa12.31□□□□□ -0.44
CPSF1-207ENST00000531727 NAA60Q9H7X0 242 aa12.31□□□□□ -0.44
CPSF1-207ENST00000531727 TRAV30A0A087WSZ9 112 aa12.3□□□□□ -0.44
CPSF1-207ENST00000531727 RPS10-NUDT3A0A1W2PQS6 291 aa12.3□□□□□ -0.44
CPSF1-207ENST00000531727 DISC1C4P0D8 188 aa12.3□□□□□ -0.44
CPSF1-207ENST00000531727 K7EQG2 157 aa12.3□□□□□ -0.44
CPSF1-207ENST00000531727 CTDSP2O14595 271 aa12.3□□□□□ -0.44
CPSF1-207ENST00000531727 IGKV1-17P01599 117 aa12.3□□□□□ -0.44
CPSF1-207ENST00000531727 P2RY1P47900 373 aa12.3□□□□□ -0.44
CPSF1-207ENST00000531727 DHODHQ02127 395 aa12.3□□□□□ -0.44
CPSF1-207ENST00000531727 TMEM187Q14656 261 aa12.3□□□□□ -0.44
CPSF1-207ENST00000531727 TIGITQ495A1 244 aa12.3□□□□□ -0.44
CPSF1-207ENST00000531727 STHQ8IWL8 128 aa12.3□□□□□ -0.44
CPSF1-207ENST00000531727 SELENOHQ8IZQ5 122 aaKnown RBP12.3□□□□□ -0.44
CPSF1-207ENST00000531727 STXBP6Q8NFX7 210 aa12.3□□□□□ -0.44
CPSF1-207ENST00000531727 C11orf45Q8TAV5 145 aa12.3□□□□□ -0.44
CPSF1-207ENST00000531727 SMIM4Q8WVI0 70 aa12.3□□□□□ -0.44
CPSF1-207ENST00000531727 MFFQ9GZY8 342 aa12.3□□□□□ -0.44
CPSF1-207ENST00000531727 NANOS2P60321 138 aaKnown RBP12.29□□□□□ -0.44
CPSF1-207ENST00000531727 SPCS2Q15005 226 aa12.29□□□□□ -0.44
CPSF1-207ENST00000531727 GPR141Q7Z602 305 aa12.29□□□□□ -0.44
CPSF1-207ENST00000531727 GRAMD2BQ96HH9 432 aa12.29□□□□□ -0.44
CPSF1-207ENST00000531727 NARS2Q96I59 477 aaKnown RBP12.29□□□□□ -0.44
CPSF1-207ENST00000531727 MRPS26Q9BYN8 205 aaKnown RBP12.29□□□□□ -0.44
CPSF1-207ENST00000531727 HEYLQ9NQ87 328 aaPredicted RBP12.29□□□□□ -0.44
CPSF1-207ENST00000531727 CACNG5Q9UF02 275 aa12.29□□□□□ -0.44
CPSF1-207ENST00000531727 CRYM-AS1A6NIL9 109 aa12.28□□□□□ -0.44
CPSF1-207ENST00000531727 CTDSPLO15194 276 aa12.28□□□□□ -0.44
CPSF1-207ENST00000531727 AKAIN1P0CW23 69 aa12.28□□□□□ -0.44
CPSF1-207ENST00000531727 ALDH3B2P48448 385 aa12.28□□□□□ -0.44
CPSF1-207ENST00000531727 RBMS2Q15434 407 aaKnown RBP12.28□□□□□ -0.44
CPSF1-207ENST00000531727 C2orf83Q53S99 150 aa12.28□□□□□ -0.44
CPSF1-207ENST00000531727 TMEM268Q5VZI3 342 aa12.28□□□□□ -0.44
CPSF1-207ENST00000531727 OR4C16Q8NGL9 310 aa12.28□□□□□ -0.44
CPSF1-207ENST00000531727 OR1S2Q8NGQ3 325 aa12.28□□□□□ -0.44
CPSF1-207ENST00000531727 RNASEH2CQ8TDP1 164 aaKnown RBP12.28□□□□□ -0.44
CPSF1-207ENST00000531727 GPR146Q96CH1 333 aa12.28□□□□□ -0.44
CPSF1-207ENST00000531727 FBXL17Q9UF56 701 aa12.28□□□□□ -0.44
CPSF1-207ENST00000531727 GPR132Q9UNW8 380 aa12.28□□□□□ -0.44
CPSF1-207ENST00000531727 ZNF688P0C7X2 276 aa12.27□□□□□ -0.45
CPSF1-207ENST00000531727 IGLC1P0CG04 106 aa12.27□□□□□ -0.45
CPSF1-207ENST00000531727 SLC25A4P12235 298 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms