RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 K7EQG2 157 aa13.36□□□□□ -0.27
SSSCA1-206ENST00000531405 ZNF688P0C7X2 276 aa13.36□□□□□ -0.27
SSSCA1-206ENST00000531405 P0C879 139 aa13.36□□□□□ -0.27
SSSCA1-206ENST00000531405 PGAM2P15259 253 aa13.36□□□□□ -0.27
SSSCA1-206ENST00000531405 HLA-DMBP28068 263 aa13.36□□□□□ -0.27
SSSCA1-206ENST00000531405 ETV6P41212 452 aa13.36□□□□□ -0.27
SSSCA1-206ENST00000531405 AKR1C2P52895 323 aa13.36□□□□□ -0.27
SSSCA1-206ENST00000531405 RNASE12Q5GAN4 147 aaKnown RBP13.36□□□□□ -0.27
SSSCA1-206ENST00000531405 Q6ZTC4 211 aa13.36□□□□□ -0.27
SSSCA1-206ENST00000531405 HRH4Q9H3N8 390 aa13.36□□□□□ -0.27
SSSCA1-206ENST00000531405 FNDC4Q9H6D8 234 aaPredicted RBP13.36□□□□□ -0.27
SSSCA1-206ENST00000531405 SMIM31A0A1B0GVY4 71 aa13.35□□□□□ -0.27
SSSCA1-206ENST00000531405 APOA1P02647 267 aa13.35□□□□□ -0.27
SSSCA1-206ENST00000531405 ELK1P19419 428 aa13.35□□□□□ -0.27
SSSCA1-206ENST00000531405 P2RY1P47900 373 aa13.35□□□□□ -0.27
SSSCA1-206ENST00000531405 HOXA1P49639 335 aaPredicted RBP13.35□□□□□ -0.27
SSSCA1-206ENST00000531405 PIGPP57054 158 aa13.35□□□□□ -0.27
SSSCA1-206ENST00000531405 PVRIGQ6DKI7 326 aa13.35□□□□□ -0.27
SSSCA1-206ENST00000531405 METTL26Q96S19 204 aa13.35□□□□□ -0.27
SSSCA1-206ENST00000531405 CLEC5AQ9NY25 188 aa13.35□□□□□ -0.27
SSSCA1-206ENST00000531405 ELOA3CA0A087WX78 387 aaPredicted RBP13.34□□□□□ -0.27
SSSCA1-206ENST00000531405 INS-IGF2F8WCM5 200 aa13.34□□□□□ -0.27
SSSCA1-206ENST00000531405 HPGDSO60760 199 aa13.34□□□□□ -0.27
SSSCA1-206ENST00000531405 CLN5O75503 358 aa13.34□□□□□ -0.27
SSSCA1-206ENST00000531405 CRYBB3P26998 211 aa13.34□□□□□ -0.27
SSSCA1-206ENST00000531405 OPRK1P41145 380 aa13.34□□□□□ -0.27
SSSCA1-206ENST00000531405 RND3P61587 244 aa13.34□□□□□ -0.27
SSSCA1-206ENST00000531405 NCS1P62166 190 aa13.34□□□□□ -0.27
SSSCA1-206ENST00000531405 X6R8D5 127 aa13.34□□□□□ -0.27
SSSCA1-206ENST00000531405 A0A0G2JRQ6 117 aa13.33□□□□□ -0.28
SSSCA1-206ENST00000531405 A0A1W2PS18 150 aa13.33□□□□□ -0.28
SSSCA1-206ENST00000531405 ZNF705EA8MWA4 302 aaPredicted RBP13.33□□□□□ -0.28
SSSCA1-206ENST00000531405 CORTO00230 105 aa13.33□□□□□ -0.28
SSSCA1-206ENST00000531405 SPP1P10451 314 aa13.33□□□□□ -0.28
SSSCA1-206ENST00000531405 MIFP14174 115 aa13.33□□□□□ -0.28
SSSCA1-206ENST00000531405 SUB1P53999 127 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSSCA1-206ENST00000531405 SP6Q3SY56 376 aa13.33□□□□□ -0.28
SSSCA1-206ENST00000531405 TIGITQ495A1 244 aa13.33□□□□□ -0.28
SSSCA1-206ENST00000531405 ACTL10Q5JWF8 245 aa13.33□□□□□ -0.28
SSSCA1-206ENST00000531405 MORN3Q6PF18 240 aaPredicted RBP13.33□□□□□ -0.28
SSSCA1-206ENST00000531405 DCANP1Q8TF63 244 aa13.33□□□□□ -0.28
SSSCA1-206ENST00000531405 TMEM230Q96A57 120 aa13.33□□□□□ -0.28
SSSCA1-206ENST00000531405 GRAMD2BQ96HH9 432 aa13.33□□□□□ -0.28
SSSCA1-206ENST00000531405 PDCD10Q9BUL8 212 aa13.33□□□□□ -0.28
SSSCA1-206ENST00000531405 PKD1P98161 4303 aa13.32□□□□□ -0.28
SSSCA1-206ENST00000531405 IGHV4-4A0A075B6R2 117 aa13.32□□□□□ -0.28
SSSCA1-206ENST00000531405 C3orf85A0A1B0GTC6 90 aa13.32□□□□□ -0.28
SSSCA1-206ENST00000531405 ZNF767PQ75MW2 155 aa13.32□□□□□ -0.28
SSSCA1-206ENST00000531405 LHFPL1Q86WI0 220 aa13.32□□□□□ -0.28
SSSCA1-206ENST00000531405 OR4X1Q8NH49 305 aa13.32□□□□□ -0.28
SSSCA1-206ENST00000531405 ZNF486Q96H40 463 aaPredicted RBP13.32□□□□□ -0.28
SSSCA1-206ENST00000531405 KLK11Q9UBX7 282 aa13.32□□□□□ -0.28
SSSCA1-206ENST00000531405 CELA1Q9UNI1 258 aa13.32□□□□□ -0.28
SSSCA1-206ENST00000531405 RYR1P21817 5038 aa13.32□□□□□ -0.28
SSSCA1-206ENST00000531405 TRAV10A0A0B4J240 114 aa13.31□□□□□ -0.28
SSSCA1-206ENST00000531405 IGKV1-17P01599 117 aa13.31□□□□□ -0.28
SSSCA1-206ENST00000531405 VBP1P61758 197 aa13.31□□□□□ -0.28
SSSCA1-206ENST00000531405 TRIM16LQ309B1 348 aa13.31□□□□□ -0.28
SSSCA1-206ENST00000531405 TMEM41BQ5BJD5 291 aa13.31□□□□□ -0.28
SSSCA1-206ENST00000531405 RNASE10Q5GAN6 216 aaKnown RBP13.31□□□□□ -0.28
SSSCA1-206ENST00000531405 CSNK1G2-AS1Q8NCQ2 148 aa13.31□□□□□ -0.28
SSSCA1-206ENST00000531405 ENY2Q9NPA8 101 aa13.31□□□□□ -0.28
SSSCA1-206ENST00000531405 CD3DP04234 171 aa13.3□□□□□ -0.28
SSSCA1-206ENST00000531405 DHRS2Q13268 280 aa13.3□□□□□ -0.28
SSSCA1-206ENST00000531405 Q6ZRM9 215 aa13.3□□□□□ -0.28
SSSCA1-206ENST00000531405 NARS2Q96I59 477 aaKnown RBP13.3□□□□□ -0.28
SSSCA1-206ENST00000531405 TBC1D24Q9ULP9 559 aa13.3□□□□□ -0.28
SSSCA1-206ENST00000531405 ATG12O94817 140 aa13.29□□□□□ -0.28
SSSCA1-206ENST00000531405 RPL5P46777 297 aaKnown RBP13.29□□□□□ -0.28
SSSCA1-206ENST00000531405 BSXQ3C1V8 233 aa13.29□□□□□ -0.28
SSSCA1-206ENST00000531405 PSMG4Q5JS54 123 aa13.29□□□□□ -0.28
SSSCA1-206ENST00000531405 OR4D10Q8NGI6 311 aa13.29□□□□□ -0.28
SSSCA1-206ENST00000531405 OR52I2Q8NH67 350 aa13.29□□□□□ -0.28
SSSCA1-206ENST00000531405 RNASE11Q8TAA1 199 aaKnown RBP13.29□□□□□ -0.28
SSSCA1-206ENST00000531405 RAB40CQ96S21 281 aa13.29□□□□□ -0.28
SSSCA1-206ENST00000531405 VCX3AQ9NNX9 186 aa13.29□□□□□ -0.28
SSSCA1-206ENST00000531405 COPZ2Q9P299 210 aa13.29□□□□□ -0.28
SSSCA1-206ENST00000531405 MUC4Q99102 2169 aa13.28□□□□□ -0.28
SSSCA1-206ENST00000531405 A0A087WXM4 84 aa13.28□□□□□ -0.28
SSSCA1-206ENST00000531405 FAM25AB3EWG3 89 aa13.28□□□□□ -0.28
SSSCA1-206ENST00000531405 FAM25CB3EWG5 89 aa13.28□□□□□ -0.28
SSSCA1-206ENST00000531405 FAM25GB3EWG6 89 aa13.28□□□□□ -0.28
SSSCA1-206ENST00000531405 SCGB2A1O75556 95 aa13.28□□□□□ -0.28
SSSCA1-206ENST00000531405 CENPSQ8N2Z9 138 aa13.28□□□□□ -0.28
SSSCA1-206ENST00000531405 ARRDC1Q8N5I2 433 aa13.28□□□□□ -0.28
SSSCA1-206ENST00000531405 OR13C8Q8NGS7 320 aa13.28□□□□□ -0.28
SSSCA1-206ENST00000531405 GLMPQ8WWB7 406 aa13.28□□□□□ -0.28
SSSCA1-206ENST00000531405 RRNAD1Q96FB5 475 aaKnown RBP13.28□□□□□ -0.28
SSSCA1-206ENST00000531405 FUNDC2Q9BWH2 189 aa13.28□□□□□ -0.28
SSSCA1-206ENST00000531405 SCRT1Q9BWW7 348 aa13.28□□□□□ -0.28
SSSCA1-206ENST00000531405 U3KQE9 123 aa13.28□□□□□ -0.28
SSSCA1-206ENST00000531405 DYNC1H1Q14204 4646 aaKnown RBP13.28□□□□□ -0.28
SSSCA1-206ENST00000531405 HELTA6NFD8 242 aa13.27□□□□□ -0.29
SSSCA1-206ENST00000531405 IGLC1P0CG04 106 aa13.27□□□□□ -0.29
SSSCA1-206ENST00000531405 UCP1P25874 307 aa13.27□□□□□ -0.29
SSSCA1-206ENST00000531405 C12orf74Q32Q52 190 aa13.27□□□□□ -0.29
SSSCA1-206ENST00000531405 C16orf54Q6UWD8 224 aa13.27□□□□□ -0.29
SSSCA1-206ENST00000531405 MARCH1Q8TCQ1 289 aa13.27□□□□□ -0.29
SSSCA1-206ENST00000531405 RNF126Q9BV68 326 aa13.27□□□□□ -0.29
SSSCA1-206ENST00000531405 TRAV30A0A087WSZ9 112 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms