RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 FAM53BQ14153 422 aa5.7□□□□□ -1.5
LIN7C-202ENST00000524596 ZIC1Q15915 447 aa5.7□□□□□ -1.5
LIN7C-202ENST00000524596 TDHQ8IZJ6 230 aa5.7□□□□□ -1.5
LIN7C-202ENST00000524596 IFT172Q9UG01 1749 aa5.7□□□□□ -1.5
LIN7C-202ENST00000524596 C1orf167Q5SNV9 1468 aa5.7□□□□□ -1.5
LIN7C-202ENST00000524596 HLA-DRB4P13762 266 aa5.7□□□□□ -1.5
LIN7C-202ENST00000524596 HIST1H4AP62805 103 aaKnown RBP5.7□□□□□ -1.5
LIN7C-202ENST00000524596 HBBP68871 147 aa5.7□□□□□ -1.5
LIN7C-202ENST00000524596 HIST2H2BCQ6DN03 193 aa5.7□□□□□ -1.5
LIN7C-202ENST00000524596 HIST2H2BDQ6DRA6 164 aa5.7□□□□□ -1.5
LIN7C-202ENST00000524596 ZNF576Q9H609 170 aa5.7□□□□□ -1.5
LIN7C-202ENST00000524596 HLA-DRB4X5D2U9 266 aa5.7□□□□□ -1.5
LIN7C-202ENST00000524596 SLIT3O75094 1523 aa5.7□□□□□ -1.5
LIN7C-202ENST00000524596 MYMXA0A1B0GTQ4 84 aa5.7□□□□□ -1.5
LIN7C-202ENST00000524596 C11orf98E9PRG8 122 aa5.7□□□□□ -1.5
LIN7C-202ENST00000524596 SS18L1O75177 396 aaPredicted RBP5.7□□□□□ -1.5
LIN7C-202ENST00000524596 IGHMP01871 453 aa5.7□□□□□ -1.5
LIN7C-202ENST00000524596 HOXB4P17483 251 aaPredicted RBP5.7□□□□□ -1.5
LIN7C-202ENST00000524596 YPEL1O60688 119 aa5.69□□□□□ -1.5
LIN7C-202ENST00000524596 IGFBP3P17936 291 aaPredicted RBP5.69□□□□□ -1.5
LIN7C-202ENST00000524596 CD70P32970 193 aa5.69□□□□□ -1.5
LIN7C-202ENST00000524596 SPINT3P49223 89 aa5.69□□□□□ -1.5
LIN7C-202ENST00000524596 DAZ2Q13117 558 aaKnown RBP5.69□□□□□ -1.5
LIN7C-202ENST00000524596 DAZ4Q86SG3 579 aaKnown RBP5.69□□□□□ -1.5
LIN7C-202ENST00000524596 EXOC3-AS1Q8N2X6 119 aa5.69□□□□□ -1.5
LIN7C-202ENST00000524596 SERP2Q8N6R1 65 aa5.69□□□□□ -1.5
LIN7C-202ENST00000524596 PLAC1Q9HBJ0 212 aa5.69□□□□□ -1.5
LIN7C-202ENST00000524596 DAZ1Q9NQZ3 744 aaKnown RBP5.69□□□□□ -1.5
LIN7C-202ENST00000524596 DAZ3Q9NR90 486 aaKnown RBP5.69□□□□□ -1.5
LIN7C-202ENST00000524596 KIF20BQ96Q89 1820 aa5.69□□□□□ -1.5
LIN7C-202ENST00000524596 E9PLD3 99 aa5.69□□□□□ -1.5
LIN7C-202ENST00000524596 SNRPD3P62318 126 aaKnown RBP5.69□□□□□ -1.5
LIN7C-202ENST00000524596 MDP1Q86V88 176 aa5.69□□□□□ -1.5
LIN7C-202ENST00000524596 COL22A1Q8NFW1 1626 aaPredicted RBP5.69□□□□□ -1.5
LIN7C-202ENST00000524596 GFERP55789 205 aa5.69□□□□□ -1.5
LIN7C-202ENST00000524596 KLHDC9Q8NEP7 349 aa5.69□□□□□ -1.5
LIN7C-202ENST00000524596 DPH3Q96FX2 82 aa5.69□□□□□ -1.5
LIN7C-202ENST00000524596 HIGD1BQ9P298 99 aa5.69□□□□□ -1.5
LIN7C-202ENST00000524596 CDC42BPGQ6DT37 1551 aa5.69□□□□□ -1.5
LIN7C-202ENST00000524596 F5H697 171 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 CELA3BP08861 270 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 ZNF672Q499Z4 452 aaPredicted RBP5.68□□□□□ -1.5
LIN7C-202ENST00000524596 CRYGNQ8WXF5 182 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 OTORQ9NRC9 128 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 OSTCQ9NRP0 149 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 PHRF1Q9P1Y6 1649 aaKnown RBP5.68□□□□□ -1.5
LIN7C-202ENST00000524596 C15orf65H3BRN8 121 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 IGHV4-39P01824 125 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 CSRP1P21291 193 aaKnown RBP5.68□□□□□ -1.5
LIN7C-202ENST00000524596 GRNP28799 593 aaKnown RBP5.68□□□□□ -1.5
LIN7C-202ENST00000524596 CACNG7P62955 275 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 PMS2CLQ68D20 193 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 DDB2Q92466 427 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 FAM90A10PA6NDY2 464 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 TM4SF5O14894 197 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 C1orf140Q5VVS0 124 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 FMC1Q96HJ9 113 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 PIKFYVEQ9Y2I7 2098 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 TECPR2O15040 1411 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 SHISA3A0PJX4 238 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 NUPR1O60356 82 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 FKBP2P26885 142 aaKnown RBP5.68□□□□□ -1.5
LIN7C-202ENST00000524596 DEFB106AQ8N104 65 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 PRSS27Q9BQR3 290 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 TPSG1Q9NRR2 321 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 TIMM9Q9Y5J7 89 aa5.68□□□□□ -1.5
LIN7C-202ENST00000524596 C17orf51A8MQB3 221 aa5.67□□□□□ -1.5
LIN7C-202ENST00000524596 LGALS9BQ3B8N2 356 aa5.67□□□□□ -1.5
LIN7C-202ENST00000524596 LGALS9CQ6DKI2 356 aa5.67□□□□□ -1.5
LIN7C-202ENST00000524596 YPEL2Q96QA6 119 aa5.67□□□□□ -1.5
LIN7C-202ENST00000524596 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.67□□□□□ -1.5
LIN7C-202ENST00000524596 N4BP2Q86UW6 1770 aaPredicted RBP5.67□□□□□ -1.5
LIN7C-202ENST00000524596 NEXMIFQ5QGS0 1516 aa5.67□□□□□ -1.5
LIN7C-202ENST00000524596 APOHP02749 345 aaPredicted RBP5.67□□□□□ -1.5
LIN7C-202ENST00000524596 LMO1P25800 156 aa5.67□□□□□ -1.5
LIN7C-202ENST00000524596 SP6Q3SY56 376 aa5.67□□□□□ -1.5
LIN7C-202ENST00000524596 A0A0G2JK05 382 aa5.67□□□□□ -1.5
LIN7C-202ENST00000524596 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.67□□□□□ -1.5
LIN7C-202ENST00000524596 K7ERJ3 54 aa5.67□□□□□ -1.5
LIN7C-202ENST00000524596 ETV2O00321 342 aaPredicted RBP5.67□□□□□ -1.5
LIN7C-202ENST00000524596 SUMO2P61956 95 aaKnown RBP5.67□□□□□ -1.5
LIN7C-202ENST00000524596 LOXL1Q08397 574 aaPredicted RBP5.67□□□□□ -1.5
LIN7C-202ENST00000524596 CST6Q15828 149 aa5.67□□□□□ -1.5
LIN7C-202ENST00000524596 RFESDQ8TAC1 157 aa5.67□□□□□ -1.5
LIN7C-202ENST00000524596 CDIP1Q9H305 208 aa5.67□□□□□ -1.5
LIN7C-202ENST00000524596 WDR83OSQ9Y284 106 aa5.67□□□□□ -1.5
LIN7C-202ENST00000524596 TULP4Q9NRJ4 1543 aa5.67□□□□□ -1.5
LIN7C-202ENST00000524596 SCN11AQ9UI33 1791 aa5.66□□□□□ -1.5
LIN7C-202ENST00000524596 PLAC8L1A1L4L8 177 aa5.66□□□□□ -1.5
LIN7C-202ENST00000524596 TMEM202A6NGA9 273 aa5.66□□□□□ -1.5
LIN7C-202ENST00000524596 LINC01549A6NIU2 74 aa5.66□□□□□ -1.5
LIN7C-202ENST00000524596 SMKR1H3BMG3 65 aa5.66□□□□□ -1.5
LIN7C-202ENST00000524596 CT62P0C5K7 136 aa5.66□□□□□ -1.5
LIN7C-202ENST00000524596 CLDN2P57739 230 aa5.66□□□□□ -1.5
LIN7C-202ENST00000524596 UBE2BP63146 152 aa5.66□□□□□ -1.5
LIN7C-202ENST00000524596 BEAN1Q3B7T3 259 aa5.66□□□□□ -1.5
LIN7C-202ENST00000524596 NPWQ8N729 165 aa5.66□□□□□ -1.5
LIN7C-202ENST00000524596 IFI27L1Q96BM0 104 aa5.66□□□□□ -1.5
LIN7C-202ENST00000524596 SPRY4Q9C004 299 aa5.66□□□□□ -1.5
LIN7C-202ENST00000524596 IAPPP10997 89 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms