RNA–Protein interactions for RNA: ENST00000507874.5

CLDND1-215, Transcript of claudin domain containing 1, humanhuman

TSL 3 BASIC

Gene CLDND1, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-215ENST00000507874 ANKRD55Q3KP44 614 aa11.33□□□□□ -0.6
CLDND1-215ENST00000507874 TRAV25A0A0B4J276 109 aa11.32□□□□□ -0.6
CLDND1-215ENST00000507874 LINC00854A0A1B0GVQ3 168 aa11.32□□□□□ -0.6
CLDND1-215ENST00000507874 YIF1AO95070 293 aa11.32□□□□□ -0.6
CLDND1-215ENST00000507874 SFT2D2O95562 160 aa11.32□□□□□ -0.6
CLDND1-215ENST00000507874 TMEM50AO95807 157 aa11.32□□□□□ -0.6
CLDND1-215ENST00000507874 PPP1R1AQ13522 171 aa11.32□□□□□ -0.6
CLDND1-215ENST00000507874 SMCO1Q147U7 214 aa11.32□□□□□ -0.6
CLDND1-215ENST00000507874 C2orf83Q53S99 150 aa11.32□□□□□ -0.6
CLDND1-215ENST00000507874 CENPSQ8N2Z9 138 aa11.32□□□□□ -0.6
CLDND1-215ENST00000507874 DEFB125Q8N687 156 aa11.32□□□□□ -0.6
CLDND1-215ENST00000507874 SLC24A4Q8NFF2 622 aa11.32□□□□□ -0.6
CLDND1-215ENST00000507874 TMEM170AQ8WVE7 144 aa11.32□□□□□ -0.6
CLDND1-215ENST00000507874 OR10C1Q96KK4 312 aa11.32□□□□□ -0.6
CLDND1-215ENST00000507874 RCHY1Q96PM5 261 aa11.32□□□□□ -0.6
CLDND1-215ENST00000507874 TM2D3Q9BRN9 247 aa11.32□□□□□ -0.6
CLDND1-215ENST00000507874 DUXBA0A1W2PPF3 345 aa11.31□□□□□ -0.6
CLDND1-215ENST00000507874 NAP1L6A6NFF2 107 aa11.31□□□□□ -0.6
CLDND1-215ENST00000507874 OR11H12B2RN74 326 aa11.31□□□□□ -0.6
CLDND1-215ENST00000507874 TNFRSF9Q07011 255 aa11.31□□□□□ -0.6
CLDND1-215ENST00000507874 RBPMS2Q6ZRY4 209 aaKnown RBP11.31□□□□□ -0.6
CLDND1-215ENST00000507874 LRTM2Q8N967 370 aa11.31□□□□□ -0.6
CLDND1-215ENST00000507874 OR52B4Q8NGK2 314 aa11.31□□□□□ -0.6
CLDND1-215ENST00000507874 ZMAT4Q9H898 229 aa11.31□□□□□ -0.6
CLDND1-215ENST00000507874 HSPB7Q9UBY9 170 aa11.31□□□□□ -0.6
CLDND1-215ENST00000507874 SMPXQ9UHP9 88 aa11.31□□□□□ -0.6
CLDND1-215ENST00000507874 IGHV3-49A0A0A0MS15 119 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 IGHV7-4-1A0A0J9YVY3 117 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 A0A1B0GU03 582 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 CLN5O75503 358 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 NDUFB6O95139 128 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 IL7P13232 177 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 HAGHQ16775 308 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 TOMM20LQ6UXN7 152 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 LINC00322Q6ZN03 302 aaPredicted RBP11.3□□□□□ -0.6
CLDND1-215ENST00000507874 ZNF600Q6ZNG1 722 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 SLC16A13Q7RTY0 426 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 OR4X1Q8NH49 305 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 OR1S1Q8NH92 325 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 HIPK2Q9H2X6 1198 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 RBKSQ9H477 322 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 SRD5A3Q9H8P0 318 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 CACFD1Q9UGQ2 172 aa11.3□□□□□ -0.6
CLDND1-215ENST00000507874 PIGBOS1A0A0B4J2F0 54 aa11.29□□□□□ -0.6
CLDND1-215ENST00000507874 RBMY1BA6NDE4 496 aaKnown RBP11.29□□□□□ -0.6
CLDND1-215ENST00000507874 RBMY1EA6NEQ0 496 aaKnown RBP11.29□□□□□ -0.6
CLDND1-215ENST00000507874 CHEK1O14757 476 aa11.29□□□□□ -0.6
CLDND1-215ENST00000507874 TSPAN4O14817 238 aa11.29□□□□□ -0.6
CLDND1-215ENST00000507874 PITX3O75364 302 aa11.29□□□□□ -0.6
CLDND1-215ENST00000507874 RBMY1DP0C7P1 496 aaKnown RBP11.29□□□□□ -0.6
CLDND1-215ENST00000507874 NPY1RP25929 384 aa11.29□□□□□ -0.6
CLDND1-215ENST00000507874 BTCP35070 178 aa11.29□□□□□ -0.6
CLDND1-215ENST00000507874 TMEM116Q8NCL8 245 aa11.29□□□□□ -0.6
CLDND1-215ENST00000507874 RNASEH2CQ8TDP1 164 aaKnown RBP11.29□□□□□ -0.6
CLDND1-215ENST00000507874 DTD1Q8TEA8 209 aa11.29□□□□□ -0.6
CLDND1-215ENST00000507874 SPAG8Q99932 426 aaPredicted RBP11.29□□□□□ -0.6
CLDND1-215ENST00000507874 RHPN1-AS1Q9BWJ2 59 aa11.29□□□□□ -0.6
CLDND1-215ENST00000507874 ZFAND3Q9H8U3 227 aa11.29□□□□□ -0.6
CLDND1-215ENST00000507874 FLVCR2Q9UPI3 526 aa11.29□□□□□ -0.6
CLDND1-215ENST00000507874 PUS1Q9Y606 427 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLDND1-215ENST00000507874 TRAV14DV4A0A0A6YYC5 116 aa11.28□□□□□ -0.6
CLDND1-215ENST00000507874 RPS10-NUDT3A0A1W2PQS6 291 aa11.28□□□□□ -0.6
CLDND1-215ENST00000507874 UBE2MP61081 183 aaKnown RBP11.28□□□□□ -0.6
CLDND1-215ENST00000507874 LAMTOR1Q6IAA8 161 aa11.28□□□□□ -0.6
CLDND1-215ENST00000507874 PRSS54Q6PEW0 395 aa11.28□□□□□ -0.6
CLDND1-215ENST00000507874 RNF2Q99496 336 aa11.28□□□□□ -0.6
CLDND1-215ENST00000507874 C7orf50Q9BRJ6 194 aaKnown RBP11.28□□□□□ -0.6
CLDND1-215ENST00000507874 IGHV3OR16-13A0A075B7E8 117 aa11.28□□□□□ -0.6
CLDND1-215ENST00000507874 IGHV3-74A0A0B4J1X5 117 aa11.28□□□□□ -0.6
CLDND1-215ENST00000507874 CENPXA8MT69 81 aa11.28□□□□□ -0.6
CLDND1-215ENST00000507874 IFNA10P01566 189 aa11.28□□□□□ -0.6
CLDND1-215ENST00000507874 IGKV1-17P01599 117 aa11.28□□□□□ -0.6
CLDND1-215ENST00000507874 HOXB5P09067 269 aa11.28□□□□□ -0.6
CLDND1-215ENST00000507874 SLC25A6P12236 298 aa11.28□□□□□ -0.6
CLDND1-215ENST00000507874 TIGITQ495A1 244 aa11.28□□□□□ -0.6
CLDND1-215ENST00000507874 GINS3Q9BRX5 216 aa11.28□□□□□ -0.6
CLDND1-215ENST00000507874 C9orf170A2RU37 121 aa11.27□□□□□ -0.61
CLDND1-215ENST00000507874 PLA2G10O15496 165 aa11.27□□□□□ -0.61
CLDND1-215ENST00000507874 APOHP02749 345 aaPredicted RBP11.27□□□□□ -0.61
CLDND1-215ENST00000507874 SLC25A4P12235 298 aa11.27□□□□□ -0.61
CLDND1-215ENST00000507874 RND2P52198 227 aa11.27□□□□□ -0.61
CLDND1-215ENST00000507874 GGNBP1Q5YKI7 109 aa11.27□□□□□ -0.61
CLDND1-215ENST00000507874 NOXA1Q86UR1 476 aa11.27□□□□□ -0.61
CLDND1-215ENST00000507874 SPATA25Q9BR10 227 aa11.27□□□□□ -0.61
CLDND1-215ENST00000507874 UBQLN2Q9UHD9 624 aa11.27□□□□□ -0.61
CLDND1-215ENST00000507874 TMED3Q9Y3Q3 217 aa11.27□□□□□ -0.61
CLDND1-215ENST00000507874 U3KQ87 197 aa11.27□□□□□ -0.61
CLDND1-215ENST00000507874 TRAV30A0A087WSZ9 112 aa11.26□□□□□ -0.61
CLDND1-215ENST00000507874 IGLC1P0CG04 106 aa11.26□□□□□ -0.61
CLDND1-215ENST00000507874 FAM90A2PQ658T7 463 aa11.26□□□□□ -0.61
CLDND1-215ENST00000507874 ETFRF1Q6IPR1 90 aa11.26□□□□□ -0.61
CLDND1-215ENST00000507874 ST8SIA2Q92186 375 aa11.26□□□□□ -0.61
CLDND1-215ENST00000507874 CITED4Q96RK1 184 aa11.26□□□□□ -0.61
CLDND1-215ENST00000507874 VSIRQ9H7M9 311 aa11.26□□□□□ -0.61
CLDND1-215ENST00000507874 IGKV3-7A0A075B6H7 116 aa11.25□□□□□ -0.61
CLDND1-215ENST00000507874 IGHV3-66A0A0C4DH42 116 aa11.25□□□□□ -0.61
CLDND1-215ENST00000507874 A6NHS1 94 aa11.25□□□□□ -0.61
CLDND1-215ENST00000507874 FAM90A26D6RGX4 464 aa11.25□□□□□ -0.61
CLDND1-215ENST00000507874 SCGB2A1O75556 95 aa11.25□□□□□ -0.61
CLDND1-215ENST00000507874 OR4E1P0C645 316 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms