RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 TRBV24-1A0A075B6N3 115 aa13.44□□□□□ -0.26
HMGXB3-202ENST00000503427 FAM168AQ92567 244 aa13.44□□□□□ -0.26
HMGXB3-202ENST00000503427 RNASE7Q9H1E1 156 aaKnown RBP13.44□□□□□ -0.26
HMGXB3-202ENST00000503427 ZNF318Q5VUA4 2279 aa13.44□□□□□ -0.26
HMGXB3-202ENST00000503427 ADMP35318 185 aa13.44□□□□□ -0.26
HMGXB3-202ENST00000503427 ARPC1AQ92747 370 aa13.44□□□□□ -0.26
HMGXB3-202ENST00000503427 TRGV3P03979 118 aa13.44□□□□□ -0.26
HMGXB3-202ENST00000503427 FAM74A4Q5TZK3 123 aa13.44□□□□□ -0.26
HMGXB3-202ENST00000503427 IGHV3OR16-13A0A075B7E8 117 aa13.44□□□□□ -0.26
HMGXB3-202ENST00000503427 IGHV3-74A0A0B4J1X5 117 aa13.44□□□□□ -0.26
HMGXB3-202ENST00000503427 TCF23Q7RTU1 214 aa13.44□□□□□ -0.26
HMGXB3-202ENST00000503427 ORMDL3Q8N138 153 aa13.44□□□□□ -0.26
HMGXB3-202ENST00000503427 PRCDQ00LT1 54 aa13.43□□□□□ -0.26
HMGXB3-202ENST00000503427 C18orf15Q96N68 181 aa13.43□□□□□ -0.26
HMGXB3-202ENST00000503427 TANC1Q9C0D5 1861 aa13.43□□□□□ -0.26
HMGXB3-202ENST00000503427 CCL3L1P16619 93 aa13.43□□□□□ -0.26
HMGXB3-202ENST00000503427 CD69Q07108 199 aa13.43□□□□□ -0.26
HMGXB3-202ENST00000503427 FOXF2Q12947 444 aa13.43□□□□□ -0.26
HMGXB3-202ENST00000503427 NEUROG1Q92886 237 aa13.43□□□□□ -0.26
HMGXB3-202ENST00000503427 MDC1Q14676 2089 aaKnown RBP13.43□□□□□ -0.26
HMGXB3-202ENST00000503427 TRAV8-6A0A0B4J262 113 aa13.43□□□□□ -0.26
HMGXB3-202ENST00000503427 OR9G9P0C7N8 305 aa13.43□□□□□ -0.26
HMGXB3-202ENST00000503427 EFNB3Q15768 340 aa13.43□□□□□ -0.26
HMGXB3-202ENST00000503427 TTC9CQ8N5M4 171 aa13.43□□□□□ -0.26
HMGXB3-202ENST00000503427 ESPL1Q14674 2120 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 ASIPP42127 132 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 PPP1R27Q86WC6 154 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 OCC1Q8TAD7 63 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 S4R3C0 116 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 IGKV1-27A0A075B6S5 117 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 FOXG1P55316 489 aaPredicted RBP13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 SRSF4Q08170 494 aaKnown RBP13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 LY6DQ14210 128 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 FER1L6-AS1Q8NA97 138 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 KLHDC3Q9BQ90 382 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 VSIRQ9H7M9 311 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 TCRBV4S1A1TA0A5B7 111 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 IGHV3-23P01764 117 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 C1QL4Q86Z23 238 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 EPDR1Q9UM22 224 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 CYB5R2Q6BCY4 276 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 TEX38Q6PEX7 206 aa13.42□□□□□ -0.26
HMGXB3-202ENST00000503427 MUC6Q6W4X9 2439 aa13.41□□□□□ -0.26
HMGXB3-202ENST00000503427 PNRC2Q9NPJ4 139 aaKnown RBP13.41□□□□□ -0.26
HMGXB3-202ENST00000503427 GLRX5Q86SX6 157 aa13.41□□□□□ -0.26
HMGXB3-202ENST00000503427 GNB1LQ9BYB4 327 aa13.41□□□□□ -0.26
HMGXB3-202ENST00000503427 PVRIGQ6DKI7 326 aa13.41□□□□□ -0.26
HMGXB3-202ENST00000503427 GEMIN7Q9H840 131 aaKnown RBP13.41□□□□□ -0.26
HMGXB3-202ENST00000503427 MED12Q93074 2177 aa13.41□□□□□ -0.26
HMGXB3-202ENST00000503427 GPR183P32249 361 aa13.41□□□□□ -0.26
HMGXB3-202ENST00000503427 B3GALT5-AS1P59052 145 aa13.41□□□□□ -0.26
HMGXB3-202ENST00000503427 NMSQ5H8A3 153 aa13.41□□□□□ -0.26
HMGXB3-202ENST00000503427 BDP1A6H8Y1 2624 aa13.41□□□□□ -0.26
HMGXB3-202ENST00000503427 IGHV3OR16-12A0A075B7B8 117 aa13.41□□□□□ -0.26
HMGXB3-202ENST00000503427 M0R381 172 aa13.41□□□□□ -0.26
HMGXB3-202ENST00000503427 QRFPP83859 136 aa13.41□□□□□ -0.26
HMGXB3-202ENST00000503427 IGHG3P01860 377 aa13.4□□□□□ -0.26
HMGXB3-202ENST00000503427 ARL6IP6Q8N6S5 226 aa13.4□□□□□ -0.26
HMGXB3-202ENST00000503427 DUX5Q96PT3 197 aa13.4□□□□□ -0.26
HMGXB3-202ENST00000503427 LAMTOR2Q9Y2Q5 125 aa13.4□□□□□ -0.26
HMGXB3-202ENST00000503427 HIST1H2BLQ99880 126 aa13.4□□□□□ -0.26
HMGXB3-202ENST00000503427 A0A0G2JLM5 398 aa13.4□□□□□ -0.26
HMGXB3-202ENST00000503427 NBR2O15453 112 aa13.4□□□□□ -0.26
HMGXB3-202ENST00000503427 CEACAM4O75871 244 aa13.4□□□□□ -0.26
HMGXB3-202ENST00000503427 PCP4P48539 62 aa13.4□□□□□ -0.26
HMGXB3-202ENST00000503427 TMEM133Q9H2Q1 129 aa13.4□□□□□ -0.26
HMGXB3-202ENST00000503427 H7C1H1 209 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 IGHV1-46P01743 117 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 GNG5P63218 68 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 OR10J3Q5JRS4 329 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 TREML4Q6UXN2 200 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 Q6ZS92 163 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 ST6GALNAC6Q969X2 333 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 IGHV3-49A0A0A0MS15 119 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 DMRTA1Q5VZB9 504 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 INTS1Q8N201 2190 aaKnown RBP13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 SRRM5B3KS81 715 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 STAG3L3P0CL85 134 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 GCSAMLQ5JQS6 135 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 IGHV3OR16-10A0A075B7F0 116 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 PGPEP1LA6NFU8 196 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 TMEM170BQ5T4T1 132 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 SCGB3A1Q96QR1 104 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 FOXC2Q99958 501 aa13.39□□□□□ -0.27
HMGXB3-202ENST00000503427 IGHV3-66A0A0C4DH42 116 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 MBD3L4A6NDZ8 208 aaPredicted RBP13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 MBD3L3A6NE82 208 aaPredicted RBP13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 MBD3L5A6NJ08 208 aaPredicted RBP13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 CXCL1P09341 107 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 TMEM42Q69YG0 159 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 HIST3H2BBQ8N257 126 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 MBD3L2Q8NHZ7 208 aaPredicted RBP13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 TFF1P04155 84 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 NIT1Q86X76 327 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 CLDN16Q9Y5I7 305 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 MUC21A0A0G2JKD1 596 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 MUC21A0A140T8X8 626 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 PYYP10082 97 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 MUC21Q5SSG8 566 aa13.38□□□□□ -0.27
HMGXB3-202ENST00000503427 SLC25A15Q9Y619 301 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms