RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	NOTO	A8MTQ0	251 aa		13.64	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334		H3BMM0	161 aa		13.64	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	SNRPD3	P62318	126 aa	Known RBP	13.64	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	PRCD	Q00LT1	54 aa		13.64	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	TMEM88	Q6PEY1	159 aa		13.64	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	SPATA12	Q7Z6I5	190 aa		13.64	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	CMTM1	Q8IZ96	169 aa		13.64	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	C15orf53	Q8NAA6	179 aa		13.64	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	OR5AP2	Q8NGF4	316 aa		13.64	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	TMEM230	Q96A57	120 aa		13.64	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	DAPK2	Q9UIK4	370 aa		13.64	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	EPM2A	B3EWF7	344 aa		13.63	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	HSPE1	P61604	102 aa	Known RBP	13.63	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	TRAV18	A0A075B6X5	111 aa		13.62	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	IGHV3OR16-12	A0A075B7B8	117 aa		13.62	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	SMIM30	A4D0T7	59 aa		13.62	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	SCGB2A1	O75556	95 aa		13.62	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	FCER2	P06734	321 aa		13.62	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	SNCA	P37840	140 aa		13.62	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	PPP5C	P53041	499 aa		13.62	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	DHRS11	Q6UWP2	260 aa		13.62	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	PRSS48	Q7RTY5	328 aa		13.62	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	H2BFWT	Q7Z2G1	175 aa		13.62	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	SEPSECS	Q9HD40	501 aa	Known RBP	13.62	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	DNAH5	Q8TE73	4624 aa		13.61	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	INAFM2	P0DMQ5	153 aa		13.61	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	HOXA1	P49639	335 aa	Predicted RBP	13.61	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	OGFRL1	Q5TC84	451 aa	Predicted RBP	13.61	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	C22orf42	Q6IC83	251 aa		13.61	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	GSG1L	Q6UXU4	331 aa		13.61	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	LGALS14	Q8TCE9	139 aa		13.61	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	VCX	Q9H320	206 aa		13.61	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	RHBDL2	Q9NX52	303 aa		13.61	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	CBX5	P45973	191 aa		13.6	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	NDUFB11	Q9NX14	153 aa		13.6	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	FAM90A26	D6RGX4	464 aa		13.59	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	CLN5	O75503	358 aa		13.59	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	HLA-DRB4	P13762	266 aa		13.59	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	SUB1	P53999	127 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	DAD1	P61803	113 aa		13.59	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	C16orf54	Q6UWD8	224 aa		13.59	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	ZNRF2	Q8NHG8	242 aa		13.59	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.59	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	EHF	Q9NZC4	300 aa		13.59	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334		U3KQE9	123 aa		13.59	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	HLA-DRB4	X5D2U9	266 aa		13.59	□□□□□ -0.23
CDK5RAP2-218	ENST00000491334	CORT	O00230	105 aa		13.58	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	GPR31	O00270	319 aa		13.58	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	SEC22A	Q96IW7	307 aa		13.58	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.58	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	SRRM2	Q9UQ35	2752 aa	Known RBP	13.58	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	TRAV30	A0A087WSZ9	112 aa		13.57	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334		A0A0A6YYH2	397 aa		13.57	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334		A6NJ64	397 aa		13.57	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	S100G	P29377	79 aa		13.57	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	OR4X1	Q8NH49	305 aa		13.57	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	GLMP	Q8WWB7	406 aa		13.57	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	AUNIP	Q9H7T9	357 aa		13.57	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	RRP15	Q9Y3B9	282 aa	Known RBP	13.57	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	HBE1	P02100	147 aa		13.56	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	HNRNPC	P07910	306 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	NKX2-1	P43699	371 aa	Predicted RBP	13.56	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	RFX2	P48378	723 aa		13.56	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	FXYD7	P58549	80 aa		13.56	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	NRN1	Q9NPD7	142 aa		13.56	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	DIABLO	Q9NR28	239 aa		13.56	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.56	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	IGKV3-20	P01619	116 aa		13.55	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	CCL18	P55774	89 aa		13.55	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	TBCE	Q15813	527 aa	Predicted RBP	13.55	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	SPINK9	Q5DT21	86 aa		13.55	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334		Q8WTZ3	238 aa		13.55	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	IFT46	Q9NQC8	304 aa		13.55	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	GOLT1B	Q9Y3E0	138 aa		13.55	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	LOC102723971	A0A1B0GUV8	181 aa		13.54	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	INS-IGF2	F8WCM5	200 aa		13.54	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	IGKV1-17	P01599	117 aa		13.54	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	OPRK1	P41145	380 aa		13.54	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	SCAND1	P57086	179 aa		13.54	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	MLANA	Q16655	118 aa		13.54	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	TIGIT	Q495A1	244 aa		13.54	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	SFXN4	Q6P4A7	337 aa		13.54	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	OR6F1	Q8NGZ6	308 aa		13.54	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	MRPL36	Q9P0J6	103 aa	Known RBP	13.54	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	MEIS3P1	A6NDR6	274 aa		13.53	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	RPL5	P46777	297 aa	Known RBP	13.53	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	RRN3P1	Q2M238	152 aa		13.53	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	PHLDA2	Q53GA4	152 aa		13.53	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	LPCAT3	Q6P1A2	487 aa		13.53	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	SLC35G3	Q8N808	338 aa		13.53	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	CLUHP3	Q96NS8	147 aa		13.53	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	C7orf50	Q9BRJ6	194 aa	Known RBP	13.53	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.53	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	TXNL4B	Q9NX01	149 aa	Known RBP	13.53	□□□□□ -0.24
CDK5RAP2-218	ENST00000491334	PMP2	P02689	132 aa		13.52	□□□□□ -0.25
CDK5RAP2-218	ENST00000491334	RNASE2	P10153	161 aa	Known RBP	13.52	□□□□□ -0.25
CDK5RAP2-218	ENST00000491334	ALDH3B2	P48448	385 aa		13.52	□□□□□ -0.25
CDK5RAP2-218	ENST00000491334	KRTAP10-2	P60368	255 aa		13.52	□□□□□ -0.25
CDK5RAP2-218	ENST00000491334	MRGPRF	Q96AM1	343 aa		13.52	□□□□□ -0.25
CDK5RAP2-218	ENST00000491334	SLC25A38	Q96DW6	304 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms