RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 OR4A16Q8NH70 328 aa7.23□□□□□ -1.25
TMEM39A-210ENST00000490099 ZFAND1Q8TCF1 268 aa7.23□□□□□ -1.25
TMEM39A-210ENST00000490099 TP53RKQ96S44 253 aa7.23□□□□□ -1.25
TMEM39A-210ENST00000490099 GGTLC1Q9BX51 225 aa7.23□□□□□ -1.25
TMEM39A-210ENST00000490099 SELENOKQ9Y6D0 94 aa7.23□□□□□ -1.25
TMEM39A-210ENST00000490099 SACSQ9NZJ4 4579 aa7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 LOC102724200A0A096LPH7 203 aaPredicted RBP7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 B3GALNT1O75752 331 aa7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 TCRBP04435 133 aa7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 PGAM2P15259 253 aa7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 PI3P19957 117 aa7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 BTCP35070 178 aa7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 CCR6P51684 374 aa7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 MFAP4P55083 255 aa7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 OXA1LQ15070 435 aa7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 IZUMO4Q1ZYL8 232 aa7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 ODF3L2Q3SX64 289 aa7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 ZFAND6Q6FIF0 208 aa7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 RBPMS2Q6ZRY4 209 aaKnown RBP7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 NRARPQ7Z6K4 114 aa7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 IL17DQ8TAD2 202 aa7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 OVOL2Q9BRP0 275 aa7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 C14orf166Q9Y224 244 aaKnown RBP7.22□□□□□ -1.25
TMEM39A-210ENST00000490099 IGHV3-21A0A0B4J1V1 117 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 KIR2DL5BA0A0G2JN68 375 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 KIR2DL5BA0A0G2JPC4 375 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 C3orf85A0A1B0GTC6 90 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 CHEK1O14757 476 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 CDS2O95674 445 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 MT-CO2P00403 227 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 CTSDP07339 412 aaPredicted RBP7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 UBE2MP61081 183 aaKnown RBP7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 ERHP84090 104 aaKnown RBP7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 RELQ04864 619 aaPredicted RBP7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 BSXQ3C1V8 233 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 LAMTOR1Q6IAA8 161 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 Q6ZRM9 215 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 Q6ZWC4 215 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 KIR2DL5AQ8N109 375 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 CCDC71LQ8N9Z2 235 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 OR13C8Q8NGS7 320 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 KIR2DL5BQ8NHK3 375 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 RTBDNQ9BSG5 229 aaPredicted RBP7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 C20orf85Q9H1P6 137 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 NUDT15Q9NV35 164 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 TP53TG1Q9Y2A0 90 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 RYR2Q92736 4967 aa7.21□□□□□ -1.26
TMEM39A-210ENST00000490099 IGHV7-4-1A0A0J9YVY3 117 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 UBE2CO00762 179 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 NUPL2O15504 423 aaKnown RBP7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 ST8SIA3O43173 380 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 PRAF2O60831 178 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 ATG12O94817 140 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 H2AFB2P0C5Z0 115 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 RNASE2P10153 161 aaKnown RBP7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 ATF4P18848 351 aaPredicted RBP7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 SP6Q3SY56 376 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 Q56UQ5 140 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 CENPSQ8N2Z9 138 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 OR52E5Q8NH55 327 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 MARCH1Q8TCQ1 289 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 GLYATL2Q8WU03 294 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 MISP3Q96FF7 219 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 RNF2Q99496 336 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 MARVELD1Q9BSK0 173 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 C20orf24Q9BUV8 137 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 RHPN1-AS1Q9BWJ2 59 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 VSIRQ9H7M9 311 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 DNAH1Q9P2D7 4330 aa7.2□□□□□ -1.26
TMEM39A-210ENST00000490099 STARD9Q9P2P6 4700 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 TRAV6A0A075B6T7 132 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 IGHV3OR16-8A0A075B7F1 116 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 TRAV14DV4A0A0A6YYC5 116 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 PIGBOS1A0A0B4J2F0 54 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 A0A0G2JRQ6 117 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 OR4C46A6NHA9 309 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 INMT-MINDY4F8WBC2 141 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 ZNF207O43670 478 aaKnown RBP7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 TMEM50AO95807 157 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 TOMM20LQ6UXN7 152 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 TMED4Q7Z7H5 227 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 FAM219AQ8IW50 185 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 UBAC2Q8NBM4 344 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 TMEM116Q8NCL8 245 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 TMEM222Q9H0R3 208 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 GPN1Q9HCN4 374 aaPredicted RBP7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 GPR132Q9UNW8 380 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 TMEM56-RWDD3S4R434 201 aa7.19□□□□□ -1.26
TMEM39A-210ENST00000490099 TEX13DA0A0J9YY54 714 aaPredicted RBP7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 A0A1B0GU03 582 aa7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 CORTO00230 105 aa7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 IGHV3-48P01763 117 aa7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 CD5P06127 495 aa7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 ANXA3P12429 323 aa7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 SNCAP37840 140 aa7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 NPBWR1P48145 328 aa7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 APOC4P55056 127 aa7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 CMC4P56277 68 aaPredicted RBP7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 TNFRSF9Q07011 255 aa7.18□□□□□ -1.26
TMEM39A-210ENST00000490099 TMEM128Q5BJH2 165 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms