RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 ZNF430Q9H8G1 570 aaPredicted RBP5.12□□□□□ -1.59
SF3A3-208ENST00000489537 TMEM242Q9NWH2 141 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 GNG13Q9P2W3 67 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 METTL1Q9UBP6 276 aaKnown RBP5.12□□□□□ -1.59
SF3A3-208ENST00000489537 USF3Q68DE3 2245 aa5.12□□□□□ -1.59
SF3A3-208ENST00000489537 ARFGEF3Q5TH69 2177 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 ARID1AO14497 2285 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 TRAV3A0A0B4J244 114 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 A0A1W2PPI3 338 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 M0QZK8 103 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 M0R036 132 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 PPP1R2P9O14990 202 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 FCN3O75636 299 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 CNIH1O95406 144 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 CRYGBP07316 175 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 SRP19P09132 144 aaKnown RBP5.11□□□□□ -1.59
SF3A3-208ENST00000489537 STAG3L2P0CL84 134 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 STAG3L3P0CL85 134 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 CDKN1AP38936 164 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 NPBWR1P48145 328 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 REG1BP48304 166 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 ATP5J2P56134 94 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 LINC00205P59089 165 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 BTN1A1Q13410 526 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 MMDQ15546 238 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 TNXAQ16473 311 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 FAM209BQ5JX69 171 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 PVRIGQ6DKI7 326 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 FAM122CQ6P4D5 195 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 LCN15Q6UWW0 184 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 ZNF562Q6V9R5 426 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 VMO1Q7Z5L0 202 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 Q8N7P7 452 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 IGFBPL1Q8WX77 278 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 TVP23CQ96ET8 276 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 ATP6V0BQ99437 205 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 TRGV9Q99603 122 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 GGTLC1Q9BX51 225 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 SIRPDQ9H106 197 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 SETD2Q9BYW2 2564 aaPredicted RBP5.11□□□□□ -1.59
SF3A3-208ENST00000489537 NF1P21359 2839 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 MAP1AP78559 2803 aaPredicted RBP5.11□□□□□ -1.59
SF3A3-208ENST00000489537 ACANP16112 2415 aa5.11□□□□□ -1.59
SF3A3-208ENST00000489537 TRAV20A0A0B4J274 112 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 TCRBV4S1A1TA0A5B7 111 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 ZFP92A6NM28 416 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 NPIPB5A8MRT5 1133 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 B4DSR2 109 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 FAM157AC9JC47 383 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 J3QLI3 93 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 TIMM23O14925 209 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 MT-ND4LP03901 98 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 DEFA4P12838 97 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 CD99P14209 185 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 AREGP15514 252 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 LMO4P61968 165 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 GAMTQ14353 236 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 HES1Q14469 280 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 ICAM4Q14773 271 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 GUCA2BQ16661 112 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 HAGHQ16775 308 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 C5orf64Q2M2E5 130 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 RNF212Q495C1 297 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 SPINK9Q5DT21 86 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 LRRC75A-AS1Q8N1F1 130 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 STPG3Q8N7X2 389 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 THAP8Q8NA92 274 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 DSCAML1Q8TD84 2053 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 RXFP4Q8TDU9 374 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 C10orf105Q8TEF2 133 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 SRSF12Q8WXF0 261 aaKnown RBP5.1□□□□□ -1.59
SF3A3-208ENST00000489537 ZNF48Q96MX3 618 aaPredicted RBP5.1□□□□□ -1.59
SF3A3-208ENST00000489537 MGST2Q99735 147 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 RASL11BQ9BPW5 248 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 BPESC1Q9GZL8 116 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 DNAJC4Q9NNZ3 241 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 RPS10P5Q9NQ39 176 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 BEX4Q9NWD9 120 aaPredicted RBP5.1□□□□□ -1.59
SF3A3-208ENST00000489537 NAT8Q9UHE5 227 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 PITPNC1Q9UKF7 332 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 FUT9Q9Y231 359 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 FAM96BQ9Y3D0 163 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 F11RQ9Y624 299 aaKnown RBP5.1□□□□□ -1.59
SF3A3-208ENST00000489537 LY96Q9Y6Y9 160 aa5.1□□□□□ -1.59
SF3A3-208ENST00000489537 C2CD3Q4AC94 2353 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 ZNF727A8MUV8 499 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 VWC2LB2RUY7 222 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 C11orf94C9JXX5 98 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 H3BQ15 152 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 COX7A2P2O60397 106 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 IGKV1D-33P01593 117 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 IGKV1-33P01594 117 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 IGHV4-39P01824 125 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 HLA-DRB1P01911 266 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 S100A9P06702 114 aaKnown RBP5.09□□□□□ -1.59
SF3A3-208ENST00000489537 CRYGCP07315 174 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 OR5G3P0C626 314 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 C8orf88P0DMB2 117 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 TMEM11P17152 192 aa5.09□□□□□ -1.59
SF3A3-208ENST00000489537 S100PP25815 95 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms