RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 NOP16Q9Y3C1 178 aaKnown RBP1.8□□□□□ -2.12
ITGB1-214ENST00000488427 OR51B2Q9Y5P1 312 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 DNAH8Q96JB1 4490 aa1.8□□□□□ -2.12
ITGB1-214ENST00000488427 FCGBPQ9Y6R7 5405 aaPredicted RBP1.8□□□□□ -2.12
ITGB1-214ENST00000488427 A0A087WTM6 91 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 TRAV8-6A0A0B4J262 113 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 IGKV1-6A0A0C4DH72 117 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 LOC102725191A0A1B0GVB3 256 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 GNG14A0A1W2PPG7 69 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 FAM183AA6NL82 134 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 CPSF4O95639 269 aaKnown RBP1.79□□□□□ -2.12
ITGB1-214ENST00000488427 TPM2P07951 284 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 TFPTP0C1Z6 253 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 NQO1P15559 274 aaKnown RBP1.79□□□□□ -2.12
ITGB1-214ENST00000488427 PSG4Q00888 419 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 FMODQ06828 376 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 BNIP2Q12982 314 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 C12orf74Q32Q52 190 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 LCN8Q6JVE9 175 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 ZCCHC23Q6ZST2 131 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 Q8NAQ8 132 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 OR5L1Q8NGL2 311 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 MFSD8Q8NHS3 518 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 IGF2BP2-AS1Q96M15 143 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 GAFA1Q96PS6 74 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 BPIFA3Q9BQP9 254 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 ADAT1Q9BUB4 502 aaKnown RBP1.79□□□□□ -2.12
ITGB1-214ENST00000488427 TSGA10Q9BZW7 698 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 OR2H1Q9GZK4 316 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 GLTPQ9NZD2 209 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 TBC1D24Q9ULP9 559 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 SLC35A3Q9Y2D2 325 aa1.79□□□□□ -2.12
ITGB1-214ENST00000488427 USH2AO75445 5202 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 IGHV2-26A0A0B4J1V2 119 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 C17orf98A8MV24 154 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 LEUTXA8MZ59 168 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 SPOPO43791 374 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 IGKV1-39P01597 117 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 IGHV3-53P01767 116 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 RBP4P02753 201 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 TFF1P04155 84 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 IGKV1D-39P04432 117 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 PTHLHP12272 177 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 GABRA2P47869 451 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 CCL18P55774 89 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 USF2Q15853 346 aaPredicted RBP1.78□□□□□ -2.12
ITGB1-214ENST00000488427 ZNF773Q6PK81 442 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 Q6ZRN7 208 aaPredicted RBP1.78□□□□□ -2.12
ITGB1-214ENST00000488427 Q6ZSA8 131 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 SCXQ7RTU7 201 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 OR4P4Q8NGL7 312 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 OR2T27Q8NH04 317 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 CDC26Q8NHZ8 85 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 ZFAND1Q8TCF1 268 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 RBPMSQ93062 196 aaKnown RBP1.78□□□□□ -2.12
ITGB1-214ENST00000488427 HIGD2AQ9BW72 106 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 MRPL20Q9BYC9 149 aaKnown RBP1.78□□□□□ -2.12
ITGB1-214ENST00000488427 SLC38A1Q9H2H9 487 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 TXNIPQ9H3M7 391 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 VSIRQ9H7M9 311 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 LZTFL1Q9NQ48 299 aa1.78□□□□□ -2.12
ITGB1-214ENST00000488427 GPR98Q8WXG9 6306 aa1.78□□□□□ -2.13
ITGB1-214ENST00000488427 A0A096LPI6 279 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 A0A0B4J2E0 115 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 A0A1B0GW64 132 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 OOSP1A8MZH6 123 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 G3V318 75 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 H3BN98 237 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 IGKV1D-33P01593 117 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 IGKV1-33P01594 117 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 HMGN2P05204 90 aaKnown RBP1.77□□□□□ -2.13
ITGB1-214ENST00000488427 ZNF728P0DKX0 622 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 PIPP12273 146 aaPredicted RBP1.77□□□□□ -2.13
ITGB1-214ENST00000488427 MIFP14174 115 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 GALP22466 123 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 GRPRP30550 384 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 DLX6P56179 175 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 RWDD2BP57060 319 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 DEFB114Q30KQ6 69 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 PDZD11Q5EBL8 140 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 ULK3Q6PHR2 472 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 CLEC19AQ6UXS0 136 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 Q6ZQT7 251 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 FAM231DQ6ZW35 169 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 CYP4Z1Q86W10 505 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 C3orf22Q8N5N4 141 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 ZNF676Q8N7Q3 588 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 BPIFB6Q8NFQ5 453 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 ANGPTL6Q8NI99 470 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 C16orf78Q8WTQ4 265 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 BAALCQ8WXS3 180 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 LINC01600Q96MT4 127 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 DERL3Q96Q80 235 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 HSPB9Q9BQS6 159 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 THTPAQ9BU02 230 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 C6orf62Q9GZU0 229 aaPredicted RBP1.77□□□□□ -2.13
ITGB1-214ENST00000488427 SLC22A4Q9H015 551 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 ARV1Q9H2C2 271 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 CHMP5Q9NZZ3 219 aa1.77□□□□□ -2.13
ITGB1-214ENST00000488427 RABL2BQ9UNT1 228 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms