RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.83□□□□□ -0.52
GABPA-203ENST00000487266 GAR1Q9NY12 217 aaKnown RBP11.83□□□□□ -0.52
GABPA-203ENST00000487266 TRAV25A0A0B4J276 109 aa11.82□□□□□ -0.52
GABPA-203ENST00000487266 IGHV7-4-1A0A0J9YVY3 117 aa11.82□□□□□ -0.52
GABPA-203ENST00000487266 A0A1B0GU03 582 aa11.82□□□□□ -0.52
GABPA-203ENST00000487266 K7EMT4 169 aa11.82□□□□□ -0.52
GABPA-203ENST00000487266 TOMM20LQ6UXN7 152 aa11.82□□□□□ -0.52
GABPA-203ENST00000487266 LYZL2Q7Z4W2 148 aa11.82□□□□□ -0.52
GABPA-203ENST00000487266 TMEM116Q8NCL8 245 aa11.82□□□□□ -0.52
GABPA-203ENST00000487266 DUSP18Q8NEJ0 188 aa11.82□□□□□ -0.52
GABPA-203ENST00000487266 OR52E5Q8NH55 327 aa11.82□□□□□ -0.52
GABPA-203ENST00000487266 TMEM170AQ8WVE7 144 aa11.82□□□□□ -0.52
GABPA-203ENST00000487266 SRRQ9GZT4 340 aa11.82□□□□□ -0.52
GABPA-203ENST00000487266 ZFAND3Q9H8U3 227 aa11.82□□□□□ -0.52
GABPA-203ENST00000487266 SMPXQ9UHP9 88 aa11.82□□□□□ -0.52
GABPA-203ENST00000487266 IGKV3-7A0A075B6H7 116 aa11.81□□□□□ -0.52
GABPA-203ENST00000487266 IGHV3-66A0A0C4DH42 116 aa11.81□□□□□ -0.52
GABPA-203ENST00000487266 CEBPZOSA8MTT3 80 aa11.81□□□□□ -0.52
GABPA-203ENST00000487266 ZNF701M0R085 212 aaPredicted RBP11.81□□□□□ -0.52
GABPA-203ENST00000487266 CHEK1O14757 476 aa11.81□□□□□ -0.52
GABPA-203ENST00000487266 TSPAN4O14817 238 aa11.81□□□□□ -0.52
GABPA-203ENST00000487266 APOHP02749 345 aaPredicted RBP11.81□□□□□ -0.52
GABPA-203ENST00000487266 FAUP35544 74 aaKnown RBP11.81□□□□□ -0.52
GABPA-203ENST00000487266 NPBWR1P48145 328 aa11.81□□□□□ -0.52
GABPA-203ENST00000487266 SUB1P53999 127 aaKnown RBP eCLIP11.81□□□□□ -0.52
GABPA-203ENST00000487266 ODF3L2Q3SX64 289 aa11.81□□□□□ -0.52
GABPA-203ENST00000487266 NMSQ5H8A3 153 aa11.81□□□□□ -0.52
GABPA-203ENST00000487266 IL22RA2Q969J5 263 aa11.81□□□□□ -0.52
GABPA-203ENST00000487266 SCGB3A2Q96PL1 93 aa11.81□□□□□ -0.52
GABPA-203ENST00000487266 RHPN1-AS1Q9BWJ2 59 aa11.81□□□□□ -0.52
GABPA-203ENST00000487266 HEYLQ9NQ87 328 aaPredicted RBP11.81□□□□□ -0.52
GABPA-203ENST00000487266 PUS1Q9Y606 427 aaKnown RBP eCLIP11.81□□□□□ -0.52
GABPA-203ENST00000487266 CSMD3Q7Z407 3707 aa11.81□□□□□ -0.52
GABPA-203ENST00000487266 CORTO00230 105 aa11.8□□□□□ -0.52
GABPA-203ENST00000487266 TMEM50AO95807 157 aa11.8□□□□□ -0.52
GABPA-203ENST00000487266 SULT1A3P0DMM9 295 aa11.8□□□□□ -0.52
GABPA-203ENST00000487266 SULT1A4P0DMN0 295 aa11.8□□□□□ -0.52
GABPA-203ENST00000487266 TFPI2P48307 235 aa11.8□□□□□ -0.52
GABPA-203ENST00000487266 AP3S2P59780 193 aa11.8□□□□□ -0.52
GABPA-203ENST00000487266 ANKRD55Q3KP44 614 aa11.8□□□□□ -0.52
GABPA-203ENST00000487266 CASC10Q5T4H9 136 aa11.8□□□□□ -0.52
GABPA-203ENST00000487266 ZFAND6Q6FIF0 208 aa11.8□□□□□ -0.52
GABPA-203ENST00000487266 SLC24A4Q8NFF2 622 aa11.8□□□□□ -0.52
GABPA-203ENST00000487266 ST8SIA2Q92186 375 aa11.8□□□□□ -0.52
GABPA-203ENST00000487266 KCNIP3Q9Y2W7 256 aa11.8□□□□□ -0.52
GABPA-203ENST00000487266 SACSQ9NZJ4 4579 aa11.79□□□□□ -0.52
GABPA-203ENST00000487266 TRAV14DV4A0A0A6YYC5 116 aa11.79□□□□□ -0.52
GABPA-203ENST00000487266 A0A0B4J2A0 478 aa11.79□□□□□ -0.52
GABPA-203ENST00000487266 C3orf84H3BNL1 204 aa11.79□□□□□ -0.52
GABPA-203ENST00000487266 CLN5O75503 358 aa11.79□□□□□ -0.52
GABPA-203ENST00000487266 HTR2BP41595 481 aa11.79□□□□□ -0.52
GABPA-203ENST00000487266 ZNF124Q15973 351 aa11.79□□□□□ -0.52
GABPA-203ENST00000487266 BAK1Q16611 211 aa11.79□□□□□ -0.52
GABPA-203ENST00000487266 TIGITQ495A1 244 aa11.79□□□□□ -0.52
GABPA-203ENST00000487266 LAMTOR1Q6IAA8 161 aa11.79□□□□□ -0.52
GABPA-203ENST00000487266 ZNF600Q6ZNG1 722 aa11.79□□□□□ -0.52
GABPA-203ENST00000487266 LILRB2Q8N423 598 aa11.79□□□□□ -0.52
GABPA-203ENST00000487266 SHPKQ9UHJ6 478 aa11.79□□□□□ -0.52
GABPA-203ENST00000487266 ANXA3P12429 323 aa11.78□□□□□ -0.52
GABPA-203ENST00000487266 VAMP1P23763 118 aa11.78□□□□□ -0.52
GABPA-203ENST00000487266 CCR6P51684 374 aa11.78□□□□□ -0.52
GABPA-203ENST00000487266 TNFRSF9Q07011 255 aa11.78□□□□□ -0.52
GABPA-203ENST00000487266 SMCO1Q147U7 214 aa11.78□□□□□ -0.52
GABPA-203ENST00000487266 C2orf83Q53S99 150 aa11.78□□□□□ -0.52
GABPA-203ENST00000487266 SPANXN2Q5MJ10 180 aa11.78□□□□□ -0.52
GABPA-203ENST00000487266 LGI3Q8N145 548 aa11.78□□□□□ -0.52
GABPA-203ENST00000487266 OR4X1Q8NH49 305 aa11.78□□□□□ -0.52
GABPA-203ENST00000487266 SDHCQ99643 169 aaPredicted RBP11.78□□□□□ -0.52
GABPA-203ENST00000487266 GGTLC1Q9BX51 225 aa11.78□□□□□ -0.52
GABPA-203ENST00000487266 LOC102724200A0A096LPH7 203 aaPredicted RBP11.77□□□□□ -0.53
GABPA-203ENST00000487266 LINC00854A0A1B0GVQ3 168 aa11.77□□□□□ -0.53
GABPA-203ENST00000487266 IGKV1-17P01599 117 aa11.77□□□□□ -0.53
GABPA-203ENST00000487266 NPY1RP25929 384 aa11.77□□□□□ -0.53
GABPA-203ENST00000487266 RND2P52198 227 aa11.77□□□□□ -0.53
GABPA-203ENST00000487266 PPP1R1AQ13522 171 aa11.77□□□□□ -0.53
GABPA-203ENST00000487266 PRSS54Q6PEW0 395 aa11.77□□□□□ -0.53
GABPA-203ENST00000487266 GBGT1Q8N5D6 347 aa11.77□□□□□ -0.53
GABPA-203ENST00000487266 RBKSQ9H477 322 aa11.77□□□□□ -0.53
GABPA-203ENST00000487266 HSPB7Q9UBY9 170 aa11.77□□□□□ -0.53
GABPA-203ENST00000487266 OR4C46A6NHA9 309 aa11.76□□□□□ -0.53
GABPA-203ENST00000487266 LYL1P12980 280 aa11.76□□□□□ -0.53
GABPA-203ENST00000487266 TMEM128Q5BJH2 165 aa11.76□□□□□ -0.53
GABPA-203ENST00000487266 FAM90A2PQ658T7 463 aa11.76□□□□□ -0.53
GABPA-203ENST00000487266 TCF24Q7RTU0 167 aa11.76□□□□□ -0.53
GABPA-203ENST00000487266 APRG1Q8IVJ8 170 aa11.76□□□□□ -0.53
GABPA-203ENST00000487266 OR1S1Q8NH92 325 aa11.76□□□□□ -0.53
GABPA-203ENST00000487266 DTD1Q8TEA8 209 aa11.76□□□□□ -0.53
GABPA-203ENST00000487266 GINS3Q9BRX5 216 aa11.76□□□□□ -0.53
GABPA-203ENST00000487266 VSIRQ9H7M9 311 aa11.76□□□□□ -0.53
GABPA-203ENST00000487266 RYR2Q92736 4967 aa11.75□□□□□ -0.53
GABPA-203ENST00000487266 RPS10-NUDT3A0A1W2PQS6 291 aa11.75□□□□□ -0.53
GABPA-203ENST00000487266 DFFBO76075 338 aa11.75□□□□□ -0.53
GABPA-203ENST00000487266 IGLC1P0CG04 106 aa11.75□□□□□ -0.53
GABPA-203ENST00000487266 RPL35AP18077 110 aaKnown RBP11.75□□□□□ -0.53
GABPA-203ENST00000487266 SRPXP78539 464 aa11.75□□□□□ -0.53
GABPA-203ENST00000487266 TRIQKQ629K1 86 aa11.75□□□□□ -0.53
GABPA-203ENST00000487266 WFDC3Q8IUB2 231 aa11.75□□□□□ -0.53
GABPA-203ENST00000487266 SFT2D2O95562 160 aa11.74□□□□□ -0.53
GABPA-203ENST00000487266 IFNA10P01566 189 aa11.74□□□□□ -0.53
GABPA-203ENST00000487266 CENPSQ8N2Z9 138 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms