RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 TMEM189A5PLL7 270 aa9.49□□□□□ -0.89
SEC61A1-205ENST00000483956 OOEPA6NGQ2 149 aa9.49□□□□□ -0.89
SEC61A1-205ENST00000483956 C15orf62A8K5M9 175 aa9.49□□□□□ -0.89
SEC61A1-205ENST00000483956 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.49□□□□□ -0.89
SEC61A1-205ENST00000483956 MPDU1O75352 247 aa9.49□□□□□ -0.89
SEC61A1-205ENST00000483956 TMEM177Q53S58 311 aa9.49□□□□□ -0.89
SEC61A1-205ENST00000483956 SPATA46Q5T0L3 261 aa9.49□□□□□ -0.89
SEC61A1-205ENST00000483956 FER1L6-AS2Q96M78 137 aa9.49□□□□□ -0.89
SEC61A1-205ENST00000483956 SS18L2Q9UHA2 77 aa9.49□□□□□ -0.89
SEC61A1-205ENST00000483956 LTC4SQ16873 150 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 TIGITQ495A1 244 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 ADAMTSL5Q6ZMM2 481 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 ACP7Q6ZNF0 438 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 MDP1Q86V88 176 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 ZNF808Q8N4W9 903 aaPredicted RBP9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 SPATA25Q9BR10 227 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 PSPNO60542 156 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 CD24P25063 80 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 CAMPP49913 170 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 NHLRC2Q8NBF2 726 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 COL25A1Q9BXS0 654 aaPredicted RBP9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 PGPEP1Q9NXJ5 209 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 RABAC1Q9UI14 185 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 MAGEA5P43359 124 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 FOXA3P55318 350 aaPredicted RBP9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 OR1C1Q15619 314 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 TBC1D28Q2M2D7 210 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 OR52E5Q8NH55 327 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 MBD6Q96DN6 1003 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 TTTY12Q9BZ98 90 aa9.48□□□□□ -0.89
SEC61A1-205ENST00000483956 FAM90A9PA6NNJ1 464 aa9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 RBMXL2O75526 392 aaKnown RBP9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 CFIP05156 583 aa9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 SP9P0CG40 484 aa9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 FABP2P12104 132 aa9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 OPRK1P41145 380 aa9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 AESQ08117 197 aa9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 PDLIM3Q53GG5 364 aaPredicted RBP9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 C6orf15Q6UXA7 325 aaPredicted RBP9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 SSMEM1Q8WWF3 244 aa9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 HSD17B10Q99714 261 aaKnown RBP9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 TIMM8BQ9Y5J9 83 aaPredicted RBP9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 COL27A1Q8IZC6 1860 aaPredicted RBP9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 C21orf140B9A014 251 aa9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 WIPF2Q8TF74 440 aaPredicted RBP9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 LRRC29Q8WV35 223 aa9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 MGST2Q99735 147 aa9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 ZNF257Q9Y2Q1 563 aa9.47□□□□□ -0.89
SEC61A1-205ENST00000483956 A0A1W2PRE2 83 aa9.46□□□□□ -0.89
SEC61A1-205ENST00000483956 TSPAN13O95857 204 aa9.46□□□□□ -0.89
SEC61A1-205ENST00000483956 IGLV2-8P01709 118 aa9.46□□□□□ -0.89
SEC61A1-205ENST00000483956 TMPRSS3P57727 454 aa9.46□□□□□ -0.89
SEC61A1-205ENST00000483956 H1FXQ92522 213 aaKnown RBP9.46□□□□□ -0.89
SEC61A1-205ENST00000483956 SIT1Q9Y3P8 196 aa9.46□□□□□ -0.89
SEC61A1-205ENST00000483956 BDP1A6H8Y1 2624 aa9.46□□□□□ -0.9
SEC61A1-205ENST00000483956 IQCF6A8MYZ5 107 aa9.46□□□□□ -0.9
SEC61A1-205ENST00000483956 PTPRBP23467 1997 aa9.46□□□□□ -0.9
SEC61A1-205ENST00000483956 TCTAP57738 103 aa9.46□□□□□ -0.9
SEC61A1-205ENST00000483956 ATP5G2Q06055 141 aa9.46□□□□□ -0.9
SEC61A1-205ENST00000483956 PEAR1Q5VY43 1037 aaPredicted RBP9.46□□□□□ -0.9
SEC61A1-205ENST00000483956 FA2HQ7L5A8 372 aa9.46□□□□□ -0.9
SEC61A1-205ENST00000483956 TMEM116Q8NCL8 245 aa9.46□□□□□ -0.9
SEC61A1-205ENST00000483956 PRR7Q8TB68 274 aa9.46□□□□□ -0.9
SEC61A1-205ENST00000483956 GGTLC1Q9BX51 225 aa9.46□□□□□ -0.9
SEC61A1-205ENST00000483956 MAP1LC3CQ9BXW4 147 aa9.46□□□□□ -0.9
SEC61A1-205ENST00000483956 HES7Q9BYE0 225 aa9.46□□□□□ -0.9
SEC61A1-205ENST00000483956 LINC00473A8K010 186 aa9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 SLC25A17O43808 307 aa9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 CEBPDP49716 269 aaPredicted RBP9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 ABHD17BQ5VST6 288 aa9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 TREML4Q6UXN2 200 aa9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 NUP35Q8NFH5 326 aa9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 COQ2Q96H96 371 aa9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 ZNF355PQ9NSJ1 428 aa9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 R4GN57 208 aa9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 OR2J3O76001 311 aa9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 FGF6P10767 208 aa9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 FAM53AQ6NSI3 398 aaPredicted RBP9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 FOXI2Q6ZQN5 318 aa9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 LOXL2Q9Y4K0 774 aa9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 PRSS46E5RG02 174 aa9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 FCGR2BP31994 310 aaPredicted RBP9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 Q6ZR03 302 aa9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 TEX45Q8NA69 505 aa9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 SPANXB1Q9NS25 103 aaPredicted RBP9.45□□□□□ -0.9
SEC61A1-205ENST00000483956 CER1O95813 267 aa9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 WFDC2Q14508 124 aa9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 EFNB3Q15768 340 aa9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 SAMD5Q5TGI4 173 aa9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 SPAG8Q99932 426 aaPredicted RBP9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 MS4A5Q9H3V2 200 aa9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 C12orf49Q9H741 205 aa9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 CACNA1DQ01668 2161 aa9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 VWC2LB2RUY7 222 aa9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 OR9G9P0C7N8 305 aa9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 GUSBP1Q15486 140 aa9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 RASL11AQ6T310 242 aa9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 DHRS13Q6UX07 377 aa9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 C1orf122Q6ZSJ8 110 aa9.44□□□□□ -0.9
SEC61A1-205ENST00000483956 TRIB1Q96RU8 372 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms