RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ZFP30Q9Y2G7 519 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 ZGRF1Q86YA3 2104 aa10.42□□□□□ -0.74
VPS52-218ENST00000482399 SS18L1O75177 396 aaPredicted RBP10.42□□□□□ -0.74
VPS52-218ENST00000482399 PLGLAQ15195 96 aa10.42□□□□□ -0.74
VPS52-218ENST00000482399 DEFB109BQ30KR1 87 aa10.42□□□□□ -0.74
VPS52-218ENST00000482399 TMEM136Q6ZRR5 245 aa10.42□□□□□ -0.74
VPS52-218ENST00000482399 OR52E5Q8NH55 327 aa10.42□□□□□ -0.74
VPS52-218ENST00000482399 IDI2-AS1Q9NZ38 188 aa10.42□□□□□ -0.74
VPS52-218ENST00000482399 TMSB15BA0A087X1C1 80 aa10.42□□□□□ -0.74
VPS52-218ENST00000482399 ISLRO14498 428 aa10.42□□□□□ -0.74
VPS52-218ENST00000482399 MMP23AO75900 390 aa10.42□□□□□ -0.74
VPS52-218ENST00000482399 P0C879 139 aa10.42□□□□□ -0.74
VPS52-218ENST00000482399 CCL3L1P16619 93 aa10.42□□□□□ -0.74
VPS52-218ENST00000482399 ZNF841Q6ZN19 808 aa10.42□□□□□ -0.74
VPS52-218ENST00000482399 PDPNQ86YL7 162 aa10.42□□□□□ -0.74
VPS52-218ENST00000482399 FDCSPQ8NFU4 85 aa10.42□□□□□ -0.74
VPS52-218ENST00000482399 SAP30LQ9HAJ7 183 aa10.42□□□□□ -0.74
VPS52-218ENST00000482399 MUC21A0A0G2JKD1 596 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 MUC21A0A140T8X8 626 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 SERTM2A0A1B0GWG4 89 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 C15orf65H3BRN8 121 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 NUDT3O95989 172 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 SAA1P0DJI8 122 aaPredicted RBP10.41□□□□□ -0.74
VPS52-218ENST00000482399 IGLC2P0DOY2 106 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 IGLC3P0DOY3 106 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 VWC2Q2TAL6 325 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 MUC21Q5SSG8 566 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 ARL6IP6Q8N6S5 226 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 Q8N7P7 452 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 AP1S3Q96PC3 154 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 hDV102S1A0JD36 115 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 C1orf229Q6ZS94 237 aaPredicted RBP10.41□□□□□ -0.74
VPS52-218ENST00000482399 BHLHA15Q7RTS1 189 aaPredicted RBP10.41□□□□□ -0.74
VPS52-218ENST00000482399 SARAFQ96BY9 339 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 SLC25A17O43808 307 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 AREGP15514 252 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 CA7P43166 264 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 PRRX1P54821 245 aa10.41□□□□□ -0.74
VPS52-218ENST00000482399 C21orf140B9A014 251 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 YPEL1O60688 119 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 UQCRFS1P47985 274 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 SELENOTP62341 195 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 C19orf35Q6ZS72 473 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 WFDC8Q8IUA0 241 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 OR8B3Q8NGG8 313 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 YPEL2Q96QA6 119 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 IGKV1OR2-108A0A075B7D4 117 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 IGHV1-18A0A0C4DH31 117 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 OR4C46A6NHA9 309 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 TNFSF4P23510 183 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 HTR1DP28221 377 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 TSPOP30536 169 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 TMEM177Q53S58 311 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 LINC00305Q7Z4B0 112 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 NUDT10Q8NFP7 164 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 C22orf15Q8WYQ4 148 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 NUDT11Q96G61 164 aa10.4□□□□□ -0.74
VPS52-218ENST00000482399 GSX1Q9H4S2 264 aaPredicted RBP10.4□□□□□ -0.74
VPS52-218ENST00000482399 SRRM4A7MD48 611 aaKnown RBP10.4□□□□□ -0.75
VPS52-218ENST00000482399 C9JCJ5 164 aa10.4□□□□□ -0.75
VPS52-218ENST00000482399 P01737 135 aa10.4□□□□□ -0.75
VPS52-218ENST00000482399 COL8A1P27658 744 aa10.4□□□□□ -0.75
VPS52-218ENST00000482399 KIR2DL2P43627 348 aaPredicted RBP10.4□□□□□ -0.75
VPS52-218ENST00000482399 KIR2DS2P43631 304 aa10.4□□□□□ -0.75
VPS52-218ENST00000482399 DLX1P56177 255 aa10.4□□□□□ -0.75
VPS52-218ENST00000482399 LYZP61626 148 aa10.4□□□□□ -0.75
VPS52-218ENST00000482399 SSBP2P81877 361 aaPredicted RBP10.4□□□□□ -0.75
VPS52-218ENST00000482399 TBR1Q16650 682 aa10.4□□□□□ -0.75
VPS52-218ENST00000482399 C18orf32Q8TCD1 76 aa10.4□□□□□ -0.75
VPS52-218ENST00000482399 MRPL20Q9BYC9 149 aaKnown RBP10.4□□□□□ -0.75
VPS52-218ENST00000482399 OSTCQ9NRP0 149 aa10.4□□□□□ -0.75
VPS52-218ENST00000482399 CREBBPQ92793 2442 aa10.4□□□□□ -0.75
VPS52-218ENST00000482399 TRBV9A0A0B4J1U6 114 aa10.39□□□□□ -0.75
VPS52-218ENST00000482399 LOC389332A0A1B0GUA5 103 aa10.39□□□□□ -0.75
VPS52-218ENST00000482399 hADV38S2A0JD32 116 aa10.39□□□□□ -0.75
VPS52-218ENST00000482399 LEPROTL1O95214 131 aa10.39□□□□□ -0.75
VPS52-218ENST00000482399 Q0VG73 95 aa10.39□□□□□ -0.75
VPS52-218ENST00000482399 MPV17L2Q567V2 206 aa10.39□□□□□ -0.75
VPS52-218ENST00000482399 UBALD2Q8IYN6 164 aa10.39□□□□□ -0.75
VPS52-218ENST00000482399 WDR31Q8NA23 367 aa10.39□□□□□ -0.75
VPS52-218ENST00000482399 NUP35Q8NFH5 326 aa10.39□□□□□ -0.75
VPS52-218ENST00000482399 TRAV8-1A0A0A6YYK1 113 aa10.39□□□□□ -0.75
VPS52-218ENST00000482399 IZUMO1RA6ND01 250 aa10.39□□□□□ -0.75
VPS52-218ENST00000482399 PEX7O00628 323 aa10.39□□□□□ -0.75
VPS52-218ENST00000482399 HIST1H1EP10412 219 aaKnown RBP10.39□□□□□ -0.75
VPS52-218ENST00000482399 SFXN3Q9BWM7 321 aa10.39□□□□□ -0.75
VPS52-218ENST00000482399 RAB9BQ9NP90 201 aa10.39□□□□□ -0.75
VPS52-218ENST00000482399 RNF7Q9UBF6 113 aa10.39□□□□□ -0.75
VPS52-218ENST00000482399 KBTBD11-OT1A0A1B0GTJ5 212 aa10.38□□□□□ -0.75
VPS52-218ENST00000482399 TEX50A0A1B0GTY4 177 aa10.38□□□□□ -0.75
VPS52-218ENST00000482399 A0A1W2PNU3 283 aaPredicted RBP10.38□□□□□ -0.75
VPS52-218ENST00000482399 PAX1P15863 534 aa10.38□□□□□ -0.75
VPS52-218ENST00000482399 PRNTQ86SH4 94 aa10.38□□□□□ -0.75
VPS52-218ENST00000482399 OR1L8Q8NGR8 309 aa10.38□□□□□ -0.75
VPS52-218ENST00000482399 ZC2HC1AQ96GY0 325 aa10.38□□□□□ -0.75
VPS52-218ENST00000482399 NAA38Q9BRA0 125 aaKnown RBP10.38□□□□□ -0.75
VPS52-218ENST00000482399 SRRM5B3KS81 715 aa10.38□□□□□ -0.75
VPS52-218ENST00000482399 CCL25O15444 150 aa10.38□□□□□ -0.75
VPS52-218ENST00000482399 RBP4P02753 201 aa10.38□□□□□ -0.75
VPS52-218ENST00000482399 ACP1P24666 158 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 304.7 ms