RNA–Protein interactions for RNA: ENST00000470771.1

ABCA4-204, Transcript of ATP binding cassette subfamily A member 4, human

TSL 3

Gene ABCA4, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA4-204	ENST00000470771	MAP6D1	Q9H9H5	199 aa		10.16	□□□□□ -0.78
ABCA4-204	ENST00000470771	KCNIP3	Q9Y2W7	256 aa		10.16	□□□□□ -0.78
ABCA4-204	ENST00000470771	IGKV3-7	A0A075B6H7	116 aa		10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	TRAV30	A0A087WSZ9	112 aa		10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	MPTX1	A8MV57	137 aa		10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	CTDSP2	O14595	271 aa		10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	NOL3	O60936	208 aa	Known RBP	10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	CDS2	O95674	445 aa		10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	AKAIN1	P0CW23	69 aa		10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	OPRK1	P41145	380 aa		10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	IL18	Q14116	193 aa		10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	TCF24	Q7RTU0	167 aa		10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	NOXA1	Q86UR1	476 aa		10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	GBGT1	Q8N5D6	347 aa		10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	OR52E5	Q8NH55	327 aa		10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	SMIM4	Q8WVI0	70 aa		10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	RBPMS	Q93062	196 aa	Known RBP	10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	TMEM230	Q96A57	120 aa		10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	BCL7B	Q9BQE9	202 aa		10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	RSL24D1	Q9UHA3	163 aa	Known RBP	10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	PUS1	Q9Y606	427 aa	Known RBP eCLIP	10.15	□□□□□ -0.78
ABCA4-204	ENST00000470771	IGHV3OR16-13	A0A075B7E8	117 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	IGHV3-74	A0A0B4J1X5	117 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	PIGBOS1	A0A0B4J2F0	54 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771		A0A0J9YWU9	116 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	NUPR2	A6NF83	97 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	CTDSPL	O15194	276 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	CLN5	O75503	358 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	DFFB	O76075	338 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	ATF4	P18848	351 aa	Predicted RBP	10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	ALDH3B2	P48448	385 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	TMBIM6	P55061	237 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	FAM90A2P	Q658T7	463 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	PVRIG	Q6DKI7	326 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	LYG2	Q86SG7	212 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	CLVS1	Q8IUQ0	354 aa	Predicted RBP	10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	APRG1	Q8IVJ8	170 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	OR4X1	Q8NH49	305 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	GATAD1	Q8WUU5	269 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	METTL26	Q96S19	204 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	RTBDN	Q9BSG5	229 aa	Predicted RBP	10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	MIXL1	Q9H2W2	232 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	NAA60	Q9H7X0	242 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	HEYL	Q9NQ87	328 aa	Predicted RBP	10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	SCP2D1	Q9UJQ7	156 aa		10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	KLK5	Q9Y337	293 aa	Predicted RBP	10.14	□□□□□ -0.79
ABCA4-204	ENST00000470771	TRAV2	A0A0B4J234	112 aa		10.13	□□□□□ -0.79
ABCA4-204	ENST00000470771	OR5AC1	P0C628	307 aa		10.13	□□□□□ -0.79
ABCA4-204	ENST00000470771	RNASE2	P10153	161 aa	Known RBP	10.13	□□□□□ -0.79
ABCA4-204	ENST00000470771	EIF2B2	P49770	351 aa	Known RBP	10.13	□□□□□ -0.79
ABCA4-204	ENST00000470771	SPCS2	Q15005	226 aa		10.13	□□□□□ -0.79
ABCA4-204	ENST00000470771	TMEM268	Q5VZI3	342 aa		10.13	□□□□□ -0.79
ABCA4-204	ENST00000470771	GLYATL2	Q8WU03	294 aa		10.13	□□□□□ -0.79
ABCA4-204	ENST00000470771	GRAMD2B	Q96HH9	432 aa		10.13	□□□□□ -0.79
ABCA4-204	ENST00000470771	VSIR	Q9H7M9	311 aa		10.13	□□□□□ -0.79
ABCA4-204	ENST00000470771	CEBPZOS	A8MTT3	80 aa		10.12	□□□□□ -0.79
ABCA4-204	ENST00000470771	SLC25A4	P12235	298 aa		10.12	□□□□□ -0.79
ABCA4-204	ENST00000470771	PMS2P11	Q13670	270 aa		10.12	□□□□□ -0.79
ABCA4-204	ENST00000470771	AARD	Q4LEZ3	155 aa		10.12	□□□□□ -0.79
ABCA4-204	ENST00000470771	ETFRF1	Q6IPR1	90 aa		10.12	□□□□□ -0.79
ABCA4-204	ENST00000470771	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.12	□□□□□ -0.79
ABCA4-204	ENST00000470771		Q8WTZ3	238 aa		10.12	□□□□□ -0.79
ABCA4-204	ENST00000470771	ST8SIA2	Q92186	375 aa		10.12	□□□□□ -0.79
ABCA4-204	ENST00000470771	MS4A6A	Q9H2W1	248 aa		10.12	□□□□□ -0.79
ABCA4-204	ENST00000470771	CCDC59	Q9P031	241 aa	Known RBP	10.12	□□□□□ -0.79
ABCA4-204	ENST00000470771	CACNG5	Q9UF02	275 aa		10.12	□□□□□ -0.79
ABCA4-204	ENST00000470771	GPR132	Q9UNW8	380 aa		10.12	□□□□□ -0.79
ABCA4-204	ENST00000470771	IGHV3-66	A0A0C4DH42	116 aa		10.11	□□□□□ -0.79
ABCA4-204	ENST00000470771	CRYM-AS1	A6NIL9	109 aa		10.11	□□□□□ -0.79
ABCA4-204	ENST00000470771	ANXA3	P12429	323 aa		10.11	□□□□□ -0.79
ABCA4-204	ENST00000470771	BSX	Q3C1V8	233 aa		10.11	□□□□□ -0.79
ABCA4-204	ENST00000470771	FAAP20	Q6NZ36	180 aa		10.11	□□□□□ -0.79
ABCA4-204	ENST00000470771	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.11	□□□□□ -0.79
ABCA4-204	ENST00000470771		Q6ZRM9	215 aa		10.11	□□□□□ -0.79
ABCA4-204	ENST00000470771	SELENOH	Q8IZQ5	122 aa	Known RBP	10.11	□□□□□ -0.79
ABCA4-204	ENST00000470771	OR51S1	Q8NGJ8	323 aa		10.11	□□□□□ -0.79
ABCA4-204	ENST00000470771	OR4C16	Q8NGL9	310 aa		10.11	□□□□□ -0.79
ABCA4-204	ENST00000470771	IL22RA2	Q969J5	263 aa		10.11	□□□□□ -0.79
ABCA4-204	ENST00000470771	ZFAND3	Q9H8U3	227 aa		10.11	□□□□□ -0.79
ABCA4-204	ENST00000470771	MCUB	Q9NWR8	336 aa		10.11	□□□□□ -0.79
ABCA4-204	ENST00000470771	RABAC1	Q9UI14	185 aa		10.11	□□□□□ -0.79
ABCA4-204	ENST00000470771	DNAH1	Q9P2D7	4330 aa		10.11	□□□□□ -0.79
ABCA4-204	ENST00000470771	PLEC	Q15149	4684 aa	Known RBP	10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771		A0A1B0GU03	582 aa		10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771	FABP12	A6NFH5	140 aa		10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771	GSTZ1	O43708	216 aa	Predicted RBP	10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771	APOH	P02749	345 aa	Predicted RBP	10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771	SULT1A3	P0DMM9	295 aa		10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771	SULT1A4	P0DMN0	295 aa		10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771	AP2S1	P53680	142 aa	Predicted RBP	10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771	SRPX	P78539	464 aa		10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771	STH	Q8IWL8	128 aa		10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771	OR1S2	Q8NGQ3	325 aa		10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771	DYNC2LI1	Q8TCX1	351 aa		10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771	ZNF414	Q96IQ9	312 aa		10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771	RARRES2	Q99969	163 aa		10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771	MFF	Q9GZY8	342 aa		10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771	TMEM56-RWDD3	S4R434	201 aa		10.1	□□□□□ -0.79
ABCA4-204	ENST00000470771		A0A0G2JRQ6	117 aa		10.09	□□□□□ -0.79
ABCA4-204	ENST00000470771	ANKRD20A5P	A0PJZ0	165 aa		10.09	□□□□□ -0.79

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