RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 MTFP1Q9UDX5 166 aa9.73□□□□□ -0.85
CPSF4-210ENST00000469897 CA1P00915 261 aaPredicted RBP9.72□□□□□ -0.85
CPSF4-210ENST00000469897 CTF1Q16619 201 aa9.72□□□□□ -0.85
CPSF4-210ENST00000469897 ZFAND1Q8TCF1 268 aa9.72□□□□□ -0.85
CPSF4-210ENST00000469897 MARCH1Q8TCQ1 289 aa9.72□□□□□ -0.85
CPSF4-210ENST00000469897 TMEM230Q96A57 120 aa9.72□□□□□ -0.85
CPSF4-210ENST00000469897 RRNAD1Q96FB5 475 aaKnown RBP9.72□□□□□ -0.85
CPSF4-210ENST00000469897 FNDC4Q9H6D8 234 aaPredicted RBP9.72□□□□□ -0.85
CPSF4-210ENST00000469897 ENY2Q9NPA8 101 aa9.72□□□□□ -0.85
CPSF4-210ENST00000469897 FBXL17Q9UF56 701 aa9.72□□□□□ -0.85
CPSF4-210ENST00000469897 RABAC1Q9UI14 185 aa9.72□□□□□ -0.85
CPSF4-210ENST00000469897 CLN5O75503 358 aa9.71□□□□□ -0.86
CPSF4-210ENST00000469897 RAB3DO95716 219 aa9.71□□□□□ -0.86
CPSF4-210ENST00000469897 HOXA1P49639 335 aaPredicted RBP9.71□□□□□ -0.86
CPSF4-210ENST00000469897 TMEM187Q14656 261 aa9.71□□□□□ -0.86
CPSF4-210ENST00000469897 GPR107Q5VW38 600 aa9.71□□□□□ -0.86
CPSF4-210ENST00000469897 TMEM229BQ8NBD8 167 aa9.71□□□□□ -0.86
CPSF4-210ENST00000469897 OR13C8Q8NGS7 320 aa9.71□□□□□ -0.86
CPSF4-210ENST00000469897 OR4X1Q8NH49 305 aa9.71□□□□□ -0.86
CPSF4-210ENST00000469897 AP3S1Q92572 193 aa9.71□□□□□ -0.86
CPSF4-210ENST00000469897 CORTO00230 105 aa9.7□□□□□ -0.86
CPSF4-210ENST00000469897 DEDDO75618 318 aa9.7□□□□□ -0.86
CPSF4-210ENST00000469897 CD74P04233 296 aa9.7□□□□□ -0.86
CPSF4-210ENST00000469897 IFNA4P05014 189 aa9.7□□□□□ -0.86
CPSF4-210ENST00000469897 TBPP20226 339 aa9.7□□□□□ -0.86
CPSF4-210ENST00000469897 UCP1P25874 307 aa9.7□□□□□ -0.86
CPSF4-210ENST00000469897 OPRK1P41145 380 aa9.7□□□□□ -0.86
CPSF4-210ENST00000469897 RPL5P46777 297 aaKnown RBP9.7□□□□□ -0.86
CPSF4-210ENST00000469897 TAS2R19P59542 299 aa9.7□□□□□ -0.86
CPSF4-210ENST00000469897 RBMS2Q15434 407 aaKnown RBP9.7□□□□□ -0.86
CPSF4-210ENST00000469897 TIGITQ495A1 244 aa9.7□□□□□ -0.86
CPSF4-210ENST00000469897 STEAP1BQ6NZ63 245 aa9.7□□□□□ -0.86
CPSF4-210ENST00000469897 CCDC71LQ8N9Z2 235 aa9.7□□□□□ -0.86
CPSF4-210ENST00000469897 RNASE11Q8TAA1 199 aaKnown RBP9.7□□□□□ -0.86
CPSF4-210ENST00000469897 RTBDNQ9BSG5 229 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-210ENST00000469897 MIXL1Q9H2W2 232 aa9.7□□□□□ -0.86
CPSF4-210ENST00000469897 TMEM231Q9H6L2 316 aa9.7□□□□□ -0.86
CPSF4-210ENST00000469897 TRAV2A0A0B4J234 112 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 TEX13DA0A0J9YY54 714 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-210ENST00000469897 A0A1W2PS18 150 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 CTDSP2O14595 271 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 GABARAPO95166 117 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 CDS2O95674 445 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 CRYBB3P26998 211 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 SPCS3P61009 180 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 LGALS9CQ6DKI2 356 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 FAAP20Q6NZ36 180 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 STHQ8IWL8 128 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 STXBP6Q8NFX7 210 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 GLYATL2Q8WU03 294 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 C15orf40Q8WUR7 153 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 METTL26Q96S19 204 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 MFFQ9GZY8 342 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 TMEM222Q9H0R3 208 aa9.69□□□□□ -0.86
CPSF4-210ENST00000469897 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-210ENST00000469897 KNCNA6PVL3 124 aa9.68□□□□□ -0.86
CPSF4-210ENST00000469897 K7EQG2 157 aa9.68□□□□□ -0.86
CPSF4-210ENST00000469897 RGS5O15539 181 aa9.68□□□□□ -0.86
CPSF4-210ENST00000469897 IGKV1-17P01599 117 aa9.68□□□□□ -0.86
CPSF4-210ENST00000469897 GIG44P09565 113 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-210ENST00000469897 OR5AC1P0C628 307 aa9.68□□□□□ -0.86
CPSF4-210ENST00000469897 P2RY1P47900 373 aa9.68□□□□□ -0.86
CPSF4-210ENST00000469897 BSXQ3C1V8 233 aa9.68□□□□□ -0.86
CPSF4-210ENST00000469897 SELENOHQ8IZQ5 122 aaKnown RBP9.68□□□□□ -0.86
CPSF4-210ENST00000469897 OR52E5Q8NH55 327 aa9.68□□□□□ -0.86
CPSF4-210ENST00000469897 LHFPL5Q8TAF8 219 aa9.68□□□□□ -0.86
CPSF4-210ENST00000469897 GPR146Q96CH1 333 aa9.68□□□□□ -0.86
CPSF4-210ENST00000469897 HEYLQ9NQ87 328 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-210ENST00000469897 TRAV30A0A087WSZ9 112 aa9.67□□□□□ -0.86
CPSF4-210ENST00000469897 GABARAPH6UMI1 98 aa9.67□□□□□ -0.86
CPSF4-210ENST00000469897 B3GALNT1O75752 331 aa9.67□□□□□ -0.86
CPSF4-210ENST00000469897 ZNF688P0C7X2 276 aa9.67□□□□□ -0.86
CPSF4-210ENST00000469897 HTR2BP41595 481 aa9.67□□□□□ -0.86
CPSF4-210ENST00000469897 MEF2DQ14814 521 aa9.67□□□□□ -0.86
CPSF4-210ENST00000469897 Q8WTZ3 238 aa9.67□□□□□ -0.86
CPSF4-210ENST00000469897 C11orf68Q9H3H3 251 aaKnown RBP9.67□□□□□ -0.86
CPSF4-210ENST00000469897 NAA60Q9H7X0 242 aa9.67□□□□□ -0.86
CPSF4-210ENST00000469897 C14orf166Q9Y224 244 aaKnown RBP9.67□□□□□ -0.86
CPSF4-210ENST00000469897 DISC1C4P0D8 188 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 SCGB2A1O75556 95 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 NXPH3O95157 252 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 RBMY1A1P0DJD3 496 aaKnown RBP9.66□□□□□ -0.86
CPSF4-210ENST00000469897 RBMY1CP0DJD4 496 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 SMIM18P0DKX4 95 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 DHODHQ02127 395 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 DHRS2Q13268 280 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 RBMY1FQ15415 496 aaKnown RBP9.66□□□□□ -0.86
CPSF4-210ENST00000469897 AARDQ4LEZ3 155 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 C2orf83Q53S99 150 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 TMEM268Q5VZI3 342 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 PRSS54Q6PEW0 395 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 TRPT1Q86TN4 253 aaKnown RBP9.66□□□□□ -0.86
CPSF4-210ENST00000469897 FAM219AQ8IW50 185 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 C2CD4CQ8TF44 421 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 DCANP1Q8TF63 244 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 RBPMSQ93062 196 aaKnown RBP9.66□□□□□ -0.86
CPSF4-210ENST00000469897 GRAMD2BQ96HH9 432 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 NARS2Q96I59 477 aaKnown RBP9.66□□□□□ -0.86
CPSF4-210ENST00000469897 CACNG5Q9UF02 275 aa9.66□□□□□ -0.86
CPSF4-210ENST00000469897 GPR132Q9UNW8 380 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms