RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 DHRS2Q13268 280 aa9.74□□□□□ -0.85
COL5A1-206ENST00000465877 DEFB114Q30KQ6 69 aa9.74□□□□□ -0.85
COL5A1-206ENST00000465877 C2orf83Q53S99 150 aa9.74□□□□□ -0.85
COL5A1-206ENST00000465877 GTSCR1Q86UQ5 136 aa9.74□□□□□ -0.85
COL5A1-206ENST00000465877 UXS1Q8NBZ7 420 aa9.74□□□□□ -0.85
COL5A1-206ENST00000465877 DTD1Q8TEA8 209 aa9.74□□□□□ -0.85
COL5A1-206ENST00000465877 MARC2Q969Z3 335 aa9.74□□□□□ -0.85
COL5A1-206ENST00000465877 RBKSQ9H477 322 aa9.74□□□□□ -0.85
COL5A1-206ENST00000465877 FNDC4Q9H6D8 234 aaPredicted RBP9.74□□□□□ -0.85
COL5A1-206ENST00000465877 TMED3Q9Y3Q3 217 aa9.74□□□□□ -0.85
COL5A1-206ENST00000465877 SELENOKQ9Y6D0 94 aa9.74□□□□□ -0.85
COL5A1-206ENST00000465877 C9orf170A2RU37 121 aa9.73□□□□□ -0.85
COL5A1-206ENST00000465877 PITX3O75364 302 aa9.73□□□□□ -0.85
COL5A1-206ENST00000465877 HOXB5P09067 269 aa9.73□□□□□ -0.85
COL5A1-206ENST00000465877 OR4E1P0C645 316 aa9.73□□□□□ -0.85
COL5A1-206ENST00000465877 C8orf88P0DMB2 117 aa9.73□□□□□ -0.85
COL5A1-206ENST00000465877 SLC25A6P12236 298 aa9.73□□□□□ -0.85
COL5A1-206ENST00000465877 NPBWR1P48145 328 aa9.73□□□□□ -0.85
COL5A1-206ENST00000465877 LYG2Q86SG7 212 aa9.73□□□□□ -0.85
COL5A1-206ENST00000465877 TMEM61Q8N0U2 210 aa9.73□□□□□ -0.85
COL5A1-206ENST00000465877 Q8N1Y9 231 aa9.73□□□□□ -0.85
COL5A1-206ENST00000465877 DUSP18Q8NEJ0 188 aa9.73□□□□□ -0.85
COL5A1-206ENST00000465877 TMEM170AQ8WVE7 144 aa9.73□□□□□ -0.85
COL5A1-206ENST00000465877 WDR89Q96FK6 387 aaPredicted RBP9.73□□□□□ -0.85
COL5A1-206ENST00000465877 C20orf24Q9BUV8 137 aa9.73□□□□□ -0.85
COL5A1-206ENST00000465877 HIPK2Q9H2X6 1198 aa9.73□□□□□ -0.85
COL5A1-206ENST00000465877 MRPL36Q9P0J6 103 aaKnown RBP9.73□□□□□ -0.85
COL5A1-206ENST00000465877 MRPL27Q9P0M9 148 aaKnown RBP9.73□□□□□ -0.85
COL5A1-206ENST00000465877 RPS10-NUDT3A0A1W2PQS6 291 aa9.72□□□□□ -0.85
COL5A1-206ENST00000465877 C15orf62A8K5M9 175 aa9.72□□□□□ -0.85
COL5A1-206ENST00000465877 FAM90A26D6RGX4 464 aa9.72□□□□□ -0.85
COL5A1-206ENST00000465877 ZNF207O43670 478 aaKnown RBP9.72□□□□□ -0.85
COL5A1-206ENST00000465877 FRMD6-AS1P0C7T7 363 aa9.72□□□□□ -0.85
COL5A1-206ENST00000465877 IGHV4-30-4P0DP06 118 aa9.72□□□□□ -0.85
COL5A1-206ENST00000465877 CD81P60033 236 aa9.72□□□□□ -0.85
COL5A1-206ENST00000465877 GUCA2BQ16661 112 aa9.72□□□□□ -0.85
COL5A1-206ENST00000465877 C4orf46Q504U0 113 aa9.72□□□□□ -0.85
COL5A1-206ENST00000465877 GGNBP1Q5YKI7 109 aa9.72□□□□□ -0.85
COL5A1-206ENST00000465877 COQ8AQ8NI60 647 aa9.72□□□□□ -0.85
COL5A1-206ENST00000465877 RNASEH2CQ8TDP1 164 aaKnown RBP9.72□□□□□ -0.85
COL5A1-206ENST00000465877 WDR12Q9GZL7 423 aaKnown RBP9.72□□□□□ -0.85
COL5A1-206ENST00000465877 BATF3Q9NR55 127 aa9.72□□□□□ -0.85
COL5A1-206ENST00000465877 STAB2Q8WWQ8 2551 aa9.72□□□□□ -0.85
COL5A1-206ENST00000465877 TENM3Q9P273 2699 aa9.71□□□□□ -0.85
COL5A1-206ENST00000465877 CLN5O75503 358 aa9.71□□□□□ -0.86
COL5A1-206ENST00000465877 SCGB2A1O75556 95 aa9.71□□□□□ -0.86
COL5A1-206ENST00000465877 ADAP1O75689 374 aa9.71□□□□□ -0.86
COL5A1-206ENST00000465877 IFNA10P01566 189 aa9.71□□□□□ -0.86
COL5A1-206ENST00000465877 OR4X1Q8NH49 305 aa9.71□□□□□ -0.86
COL5A1-206ENST00000465877 OR10C1Q96KK4 312 aa9.71□□□□□ -0.86
COL5A1-206ENST00000465877 ZFAND3Q9H8U3 227 aa9.71□□□□□ -0.86
COL5A1-206ENST00000465877 TBC1D24Q9ULP9 559 aa9.71□□□□□ -0.86
COL5A1-206ENST00000465877 DNAH7Q8WXX0 4024 aa9.71□□□□□ -0.86
COL5A1-206ENST00000465877 TRAV6A0A075B6T7 132 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 ZNF785A8K8V0 405 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 K7EMT4 169 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 YIF1AO95070 293 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 SCAF4O95104 1147 aaKnown RBP9.7□□□□□ -0.86
COL5A1-206ENST00000465877 IAPPP10997 89 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 RND2P52198 227 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 ZNF846Q147U1 533 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 PRSS54Q6PEW0 395 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 ZNF600Q6ZNG1 722 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 SLC16A13Q7RTY0 426 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 NOXA1Q86UR1 476 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 OR52B4Q8NGK2 314 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 ASCL2Q99929 193 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 NEURL2Q9BR09 285 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 GINS3Q9BRX5 216 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 WFDC10AQ9H1F0 79 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 NUDT15Q9NV35 164 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 PUS1Q9Y606 427 aaKnown RBP eCLIP9.7□□□□□ -0.86
COL5A1-206ENST00000465877 U3KQ87 197 aa9.7□□□□□ -0.86
COL5A1-206ENST00000465877 TRAV25A0A0B4J276 109 aa9.69□□□□□ -0.86
COL5A1-206ENST00000465877 IGHV7-4-1A0A0J9YVY3 117 aa9.69□□□□□ -0.86
COL5A1-206ENST00000465877 MPTX1A8MV57 137 aa9.69□□□□□ -0.86
COL5A1-206ENST00000465877 A8MZ25 164 aa9.69□□□□□ -0.86
COL5A1-206ENST00000465877 TMEM50AO95807 157 aa9.69□□□□□ -0.86
COL5A1-206ENST00000465877 TCRBP04435 133 aa9.69□□□□□ -0.86
COL5A1-206ENST00000465877 CD7P09564 240 aa9.69□□□□□ -0.86
COL5A1-206ENST00000465877 SLC25A4P12235 298 aa9.69□□□□□ -0.86
COL5A1-206ENST00000465877 MLANAQ16655 118 aa9.69□□□□□ -0.86
COL5A1-206ENST00000465877 TOMM20LQ6UXN7 152 aa9.69□□□□□ -0.86
COL5A1-206ENST00000465877 RBPMS2Q6ZRY4 209 aaKnown RBP9.69□□□□□ -0.86
COL5A1-206ENST00000465877 MITD1Q8WV92 249 aa9.69□□□□□ -0.86
COL5A1-206ENST00000465877 SYNGR2O43760 224 aa9.68□□□□□ -0.86
COL5A1-206ENST00000465877 MED6O75586 246 aa9.68□□□□□ -0.86
COL5A1-206ENST00000465877 UPK1BO75841 260 aa9.68□□□□□ -0.86
COL5A1-206ENST00000465877 IGKV1-17P01599 117 aa9.68□□□□□ -0.86
COL5A1-206ENST00000465877 IGLC1P0CG04 106 aa9.68□□□□□ -0.86
COL5A1-206ENST00000465877 NHLRC4P0CG21 123 aaPredicted RBP9.68□□□□□ -0.86
COL5A1-206ENST00000465877 ASAH1Q13510 395 aa9.68□□□□□ -0.86
COL5A1-206ENST00000465877 TIGITQ495A1 244 aa9.68□□□□□ -0.86
COL5A1-206ENST00000465877 ETFRF1Q6IPR1 90 aa9.68□□□□□ -0.86
COL5A1-206ENST00000465877 TMEM116Q8NCL8 245 aa9.68□□□□□ -0.86
COL5A1-206ENST00000465877 OR1S2Q8NGQ3 325 aa9.68□□□□□ -0.86
COL5A1-206ENST00000465877 ACY3Q96HD9 319 aa9.68□□□□□ -0.86
COL5A1-206ENST00000465877 CIB3Q96Q77 187 aaPredicted RBP9.68□□□□□ -0.86
COL5A1-206ENST00000465877 SPAG8Q99932 426 aaPredicted RBP9.68□□□□□ -0.86
COL5A1-206ENST00000465877 MAGT1Q9H0U3 335 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms