RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 SMPXQ9UHP9 88 aa16.23■□□□□ 0.19
LIME1-203ENST00000465591 GNG7O60262 68 aa16.22■□□□□ 0.19
LIME1-203ENST00000465591 YIF1AO95070 293 aa16.22■□□□□ 0.19
LIME1-203ENST00000465591 LYL1P12980 280 aa16.22■□□□□ 0.19
LIME1-203ENST00000465591 DHODHQ02127 395 aa16.22■□□□□ 0.19
LIME1-203ENST00000465591 MLANAQ16655 118 aa16.22■□□□□ 0.19
LIME1-203ENST00000465591 BSXQ3C1V8 233 aa16.22■□□□□ 0.19
LIME1-203ENST00000465591 FAM219AQ8IW50 185 aa16.22■□□□□ 0.19
LIME1-203ENST00000465591 MCUBQ9NWR8 336 aa16.22■□□□□ 0.19
LIME1-203ENST00000465591 CACNG5Q9UF02 275 aa16.22■□□□□ 0.19
LIME1-203ENST00000465591 SCP2D1Q9UJQ7 156 aa16.22■□□□□ 0.19
LIME1-203ENST00000465591 TMEM56-RWDD3S4R434 201 aa16.22■□□□□ 0.19
LIME1-203ENST00000465591 TENM2Q9NT68 2774 aa16.22■□□□□ 0.19
LIME1-203ENST00000465591 IGHV7-4-1A0A0J9YVY3 117 aa16.21■□□□□ 0.19
LIME1-203ENST00000465591 CHEK1O14757 476 aa16.21■□□□□ 0.19
LIME1-203ENST00000465591 KLF9Q13886 244 aaPredicted RBP16.21■□□□□ 0.19
LIME1-203ENST00000465591 TMEM187Q14656 261 aa16.21■□□□□ 0.19
LIME1-203ENST00000465591 ODF3L2Q3SX64 289 aa16.21■□□□□ 0.19
LIME1-203ENST00000465591 ZFAND6Q6FIF0 208 aa16.21■□□□□ 0.19
LIME1-203ENST00000465591 RNF2Q99496 336 aa16.21■□□□□ 0.19
LIME1-203ENST00000465591 RHPN1-AS1Q9BWJ2 59 aa16.21■□□□□ 0.19
LIME1-203ENST00000465591 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.21■□□□□ 0.19
LIME1-203ENST00000465591 IGHV3OR16-13A0A075B7E8 117 aa16.2■□□□□ 0.18
LIME1-203ENST00000465591 IGHV3-74A0A0B4J1X5 117 aa16.2■□□□□ 0.18
LIME1-203ENST00000465591 SPCS3P61009 180 aa16.2■□□□□ 0.18
LIME1-203ENST00000465591 SUPT4H1P63272 117 aaKnown RBP16.2■□□□□ 0.18
LIME1-203ENST00000465591 TOMM20LQ6UXN7 152 aa16.2■□□□□ 0.18
LIME1-203ENST00000465591 DUSP18Q8NEJ0 188 aa16.2■□□□□ 0.18
LIME1-203ENST00000465591 GALNT14Q96FL9 552 aa16.2■□□□□ 0.18
LIME1-203ENST00000465591 ENY2Q9NPA8 101 aa16.2■□□□□ 0.18
LIME1-203ENST00000465591 SACSQ9NZJ4 4579 aa16.2■□□□□ 0.18
LIME1-203ENST00000465591 TMEM50AO95807 157 aa16.19■□□□□ 0.18
LIME1-203ENST00000465591 NPBWR1P48145 328 aa16.19■□□□□ 0.18
LIME1-203ENST00000465591 BAK1Q16611 211 aa16.19■□□□□ 0.18
LIME1-203ENST00000465591 LAMTOR1Q6IAA8 161 aa16.19■□□□□ 0.18
LIME1-203ENST00000465591 TMEM116Q8NCL8 245 aa16.19■□□□□ 0.18
LIME1-203ENST00000465591 OR52E5Q8NH55 327 aa16.19■□□□□ 0.18
LIME1-203ENST00000465591 SCGB3A2Q96PL1 93 aa16.19■□□□□ 0.18
LIME1-203ENST00000465591 GGTLC1Q9BX51 225 aa16.19■□□□□ 0.18
LIME1-203ENST00000465591 ZFAND3Q9H8U3 227 aa16.19■□□□□ 0.18
LIME1-203ENST00000465591 A0A1B0GU03 582 aa16.18■□□□□ 0.18
LIME1-203ENST00000465591 NXPH3O95157 252 aa16.18■□□□□ 0.18
LIME1-203ENST00000465591 SUB1P53999 127 aaKnown RBP eCLIP16.18■□□□□ 0.18
LIME1-203ENST00000465591 TMEM170AQ8WVE7 144 aa16.18■□□□□ 0.18
LIME1-203ENST00000465591 SDHCQ99643 169 aaPredicted RBP16.18■□□□□ 0.18
LIME1-203ENST00000465591 LOC102724200A0A096LPH7 203 aaPredicted RBP16.17■□□□□ 0.18
LIME1-203ENST00000465591 TRAV14DV4A0A0A6YYC5 116 aa16.17■□□□□ 0.18
LIME1-203ENST00000465591 CENPXA8MT69 81 aa16.17■□□□□ 0.18
LIME1-203ENST00000465591 APOHP02749 345 aaPredicted RBP16.17■□□□□ 0.18
LIME1-203ENST00000465591 IL7P13232 177 aa16.17■□□□□ 0.18
LIME1-203ENST00000465591 AKR1C4P17516 323 aa16.17■□□□□ 0.18
LIME1-203ENST00000465591 OPRK1P41145 380 aa16.17■□□□□ 0.18
LIME1-203ENST00000465591 ZNF846Q147U1 533 aa16.17■□□□□ 0.18
LIME1-203ENST00000465591 FAM90A2PQ658T7 463 aa16.17■□□□□ 0.18
LIME1-203ENST00000465591 LILRB2Q8N423 598 aa16.17■□□□□ 0.18
LIME1-203ENST00000465591 CCDC32Q9BV29 185 aa16.17■□□□□ 0.18
LIME1-203ENST00000465591 WDR12Q9GZL7 423 aaKnown RBP16.17■□□□□ 0.18
LIME1-203ENST00000465591 PUS1Q9Y606 427 aaKnown RBP eCLIP16.17■□□□□ 0.18
LIME1-203ENST00000465591 RYR2Q92736 4967 aa16.16■□□□□ 0.18
LIME1-203ENST00000465591 NAP1L6A6NFF2 107 aa16.16■□□□□ 0.18
LIME1-203ENST00000465591 CORTO00230 105 aa16.16■□□□□ 0.18
LIME1-203ENST00000465591 ZNF600Q6ZNG1 722 aa16.16■□□□□ 0.18
LIME1-203ENST00000465591 ST8SIA2Q92186 375 aa16.16■□□□□ 0.18
LIME1-203ENST00000465591 IL22RA2Q969J5 263 aa16.16■□□□□ 0.18
LIME1-203ENST00000465591 KCNIP3Q9Y2W7 256 aa16.16■□□□□ 0.18
LIME1-203ENST00000465591 IGKV3-7A0A075B6H7 116 aa16.15■□□□□ 0.18
LIME1-203ENST00000465591 OR4C46A6NHA9 309 aa16.15■□□□□ 0.18
LIME1-203ENST00000465591 CLN5O75503 358 aa16.15■□□□□ 0.18
LIME1-203ENST00000465591 NMSQ5H8A3 153 aa16.15■□□□□ 0.18
LIME1-203ENST00000465591 LYZL2Q7Z4W2 148 aa16.15■□□□□ 0.18
LIME1-203ENST00000465591 OR4X1Q8NH49 305 aa16.15■□□□□ 0.18
LIME1-203ENST00000465591 C7orf50Q9BRJ6 194 aaKnown RBP16.15■□□□□ 0.18
LIME1-203ENST00000465591 OVOL2Q9BRP0 275 aa16.15■□□□□ 0.18
LIME1-203ENST00000465591 HEYLQ9NQ87 328 aaPredicted RBP16.15■□□□□ 0.18
LIME1-203ENST00000465591 IGHV3-66A0A0C4DH42 116 aa16.14■□□□□ 0.17
LIME1-203ENST00000465591 CEBPZOSA8MTT3 80 aa16.14■□□□□ 0.17
LIME1-203ENST00000465591 HTR2BP41595 481 aa16.14■□□□□ 0.17
LIME1-203ENST00000465591 TFPI2P48307 235 aa16.14■□□□□ 0.17
LIME1-203ENST00000465591 ZNF124Q15973 351 aa16.14■□□□□ 0.17
LIME1-203ENST00000465591 VSIRQ9H7M9 311 aa16.14■□□□□ 0.17
LIME1-203ENST00000465591 IGKV1-17P01599 117 aa16.13■□□□□ 0.17
LIME1-203ENST00000465591 SULT1A3P0DMM9 295 aa16.13■□□□□ 0.17
LIME1-203ENST00000465591 SULT1A4P0DMN0 295 aa16.13■□□□□ 0.17
LIME1-203ENST00000465591 TIGITQ495A1 244 aa16.13■□□□□ 0.17
LIME1-203ENST00000465591 C2orf83Q53S99 150 aa16.13■□□□□ 0.17
LIME1-203ENST00000465591 GBGT1Q8N5D6 347 aa16.13■□□□□ 0.17
LIME1-203ENST00000465591 SLC24A4Q8NFF2 622 aa16.13■□□□□ 0.17
LIME1-203ENST00000465591 SLC25A21Q9BQT8 299 aaPredicted RBP16.13■□□□□ 0.17
LIME1-203ENST00000465591 GINS3Q9BRX5 216 aa16.13■□□□□ 0.17
LIME1-203ENST00000465591 A0A0B4J2A0 478 aa16.12■□□□□ 0.17
LIME1-203ENST00000465591 LINC00854A0A1B0GVQ3 168 aa16.12■□□□□ 0.17
LIME1-203ENST00000465591 TCF24Q7RTU0 167 aa16.12■□□□□ 0.17
LIME1-203ENST00000465591 TMED4Q7Z7H5 227 aa16.12■□□□□ 0.17
LIME1-203ENST00000465591 APRG1Q8IVJ8 170 aa16.12■□□□□ 0.17
LIME1-203ENST00000465591 SHPKQ9UHJ6 478 aa16.12■□□□□ 0.17
LIME1-203ENST00000465591 PRSS54Q6PEW0 395 aa16.11■□□□□ 0.17
LIME1-203ENST00000465591 LYSTQ99698 3801 aa16.11■□□□□ 0.17
LIME1-203ENST00000465591 DFFBO76075 338 aa16.1■□□□□ 0.17
LIME1-203ENST00000465591 IGLC1P0CG04 106 aa16.1■□□□□ 0.17
LIME1-203ENST00000465591 RPL35AP18077 110 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 251.3 ms