RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 Q56UQ5 140 aa9.53□□□□□ -0.88
PDZRN3-203ENST00000462146 HES3Q5TGS1 186 aa9.53□□□□□ -0.88
PDZRN3-203ENST00000462146 ZNF841Q6ZN19 808 aa9.53□□□□□ -0.88
PDZRN3-203ENST00000462146 NUP35Q8NFH5 326 aa9.53□□□□□ -0.88
PDZRN3-203ENST00000462146 VWC2LB2RUY7 222 aa9.52□□□□□ -0.88
PDZRN3-203ENST00000462146 FNDC10F2Z333 226 aa9.52□□□□□ -0.88
PDZRN3-203ENST00000462146 M0R1B8 84 aa9.52□□□□□ -0.88
PDZRN3-203ENST00000462146 LHBP01229 141 aa9.52□□□□□ -0.88
PDZRN3-203ENST00000462146 IGHG3P01860 377 aa9.52□□□□□ -0.88
PDZRN3-203ENST00000462146 RPL19P84098 196 aaKnown RBP9.52□□□□□ -0.88
PDZRN3-203ENST00000462146 C1orf162Q8NEQ5 155 aaPredicted RBP9.52□□□□□ -0.88
PDZRN3-203ENST00000462146 CCL13Q99616 98 aa9.52□□□□□ -0.88
PDZRN3-203ENST00000462146 ZNF71Q9NQZ8 489 aaPredicted RBP9.52□□□□□ -0.88
PDZRN3-203ENST00000462146 SH2D7A6NKC9 451 aaPredicted RBP9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 CCL25O15444 150 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 TSPOP30536 169 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 CAMPP49913 170 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 CD69Q07108 199 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 PMCHL1Q16048 86 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 POU2AF1Q16633 256 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 C2orf83Q53S99 150 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 BHLHA15Q7RTS1 189 aaPredicted RBP9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 NUDT10Q8NFP7 164 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 FDCSPQ8NFU4 85 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 MBD6Q96DN6 1003 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 NUDT11Q96G61 164 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 M0QZ24 198 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 NKX2-8O15522 239 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 STUMQ69YW2 141 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 RNASEKQ6P5S7 137 aaKnown RBP9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 CLEC5AQ9NY25 188 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 AMMECR1Q9Y4X0 333 aaPredicted RBP9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 SLC25A15Q9Y619 301 aa9.52□□□□□ -0.89
PDZRN3-203ENST00000462146 DMXL2Q8TDJ6 3036 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 FAM181BA6NEQ2 426 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 M0R2Z0 102 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 REG1BP48304 166 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 C10orf55Q5SWW7 151 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 PATE2Q6UY27 113 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 ZNF329Q86UD4 541 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 MRPL36Q9P0J6 103 aaKnown RBP9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 ZNF257Q9Y2Q1 563 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 ITGB1BP1O14713 200 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 HSBP1O75506 76 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 SELENOVP59797 346 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 MZT1Q08AG7 82 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 COX19Q49B96 90 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 RUSC1-AS1Q66K80 236 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 C19orf35Q6ZS72 473 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 PNKDQ8N490 385 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 ST6GALNAC6Q969X2 333 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 GAFA1Q96PS6 74 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 FNDC4Q9H6D8 234 aaPredicted RBP9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 TNFRSF19Q9NS68 423 aa9.51□□□□□ -0.89
PDZRN3-203ENST00000462146 REG1AP05451 166 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 ZNF883P0CG24 379 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 IGLL1P15814 213 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 CFHR2P36980 270 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 ERASQ7Z444 233 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 URB1-AS1Q96HZ7 61 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 COL25A1Q9BXS0 654 aaPredicted RBP9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 MRPL20Q9BYC9 149 aaKnown RBP9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 PLSCR4Q9NRQ2 329 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 DKK4Q9UBT3 224 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 RPH3ALQ9UNE2 315 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 HIGD1CA8MV81 97 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 PEX7O00628 323 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 CDX4O14627 284 aaPredicted RBP9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 TBR1Q16650 682 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 RNASE8Q8TDE3 154 aaKnown RBP9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 ADTRPQ96IZ2 230 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 COMMD5Q9GZQ3 224 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 MRPL27Q9P0M9 148 aaKnown RBP9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 PROCRQ9UNN8 238 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 CBY1Q9Y3M2 126 aa9.5□□□□□ -0.89
PDZRN3-203ENST00000462146 PRR33A8MZF0 331 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 PCP4P48539 62 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 KLF3P57682 345 aaPredicted RBP9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 RTL8BQ17RB0 113 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 SLC25A48Q6ZT89 311 aaKnown RBP9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 SEM1Q6ZVN7 128 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 TCF24Q7RTU0 167 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 OR1L8Q8NGR8 309 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 ALKBH7Q9BT30 221 aaPredicted RBP9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 PAXXQ9BUH6 204 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 C20orf202A1L168 122 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 C2orf70A6NJV1 201 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 COX7A2P2O60397 106 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 DIAPH2-AS1Q14236 149 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 RPRMLQ8N4K4 120 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 WIPF2Q8TF74 440 aaPredicted RBP9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 HARBI1Q96MB7 349 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 CGB1A6NKQ9 187 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 PTTG1IPP53801 180 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 LINC00322Q6ZN03 302 aaPredicted RBP9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 LINC00173Q6ZV60 143 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 KLHDC1Q8N7A1 406 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 OR8B3Q8NGG8 313 aa9.49□□□□□ -0.89
PDZRN3-203ENST00000462146 BLNKQ8WV28 456 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms