RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 CEACAM21Q3KPI0 293 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 SPIN3Q5JUX0 258 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 C9orf135Q5VTT2 229 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 HAGHLQ6PII5 290 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 CALHM1Q8IU99 346 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 ZNF695Q8IW36 515 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 COMMD1Q8N668 190 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 BPIFCQ8NFQ6 507 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 OR5A2Q8NGI9 324 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 OR4A4PQ8NGN8 299 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 RNASE11Q8TAA1 199 aaKnown RBP2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 LHFPL5Q8TAF8 219 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 SMIM8Q96KF7 97 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 RARRES2Q99969 163 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 RTL8AQ9BWD3 113 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 C1QTNF6Q9BXI9 259 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 SEC11CQ9BY50 192 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 PKIBQ9C010 78 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 SLC25A31Q9H0C2 315 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 IFI27L2Q9H2X8 130 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 TREM1Q9NP99 234 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 PARP11Q9NR21 331 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 CYTL1Q9NRR1 136 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 TMEM100Q9NV29 134 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 ZNF629Q9UEG4 869 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 NCKAP5O14513 1909 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 MYO7BQ6PIF6 2116 aa2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 TNRC6AQ8NDV7 1962 aaKnown RBP2.69□□□□□ -1.98
HMGB3P6-201ENST00000444896 TNRC18O15417 2968 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 IGKV2D-24A0A075B6R9 120 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 C3orf85A0A1B0GTC6 90 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 LOC105371267A0A1B0GV96 52 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 TMEM218A2RU14 115 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 TMEM210A6NLX4 147 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 H0Y980 276 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 J3QT63 122 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 PITX3O75364 302 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 TMEM50AO95807 157 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 NAPSAO96009 420 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 PRH1P02810 166 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 SEC11BP0C7V7 166 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 ZNF806P0C7X5 589 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 CCL2P13500 99 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 KITLGP21583 273 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 OMGP23515 440 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 GNRHRP30968 328 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 TMEM33P57088 247 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 RAB2AP61019 212 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 BAXQ07812 192 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 ZNF616Q08AN1 781 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 IL15RAQ13261 267 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 OR8G1Q15617 311 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 GABRA6Q16445 453 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 DEFB116Q30KQ4 102 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 HIKESHIQ53FT3 197 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 FBXW9Q5XUX1 488 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 RPL7L1Q6DKI1 246 aaKnown RBP2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 MDP1Q86V88 176 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 STX12Q86Y82 276 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 PCP2Q8IVA1 136 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 FAM58AQ8N1B3 248 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 SLC35G3Q8N808 338 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 ZFP62Q8NB50 900 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 UBAC2Q8NBM4 344 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 LFNGQ8NES3 379 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 OR10J5Q8NHC4 309 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 CD300LFQ8TDQ1 290 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 OR5P3Q8WZ94 311 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 TMEM56Q96MV1 263 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 ADAT1Q9BUB4 502 aaKnown RBP2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 PBDC1Q9BVG4 233 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 TMEM222Q9H0R3 208 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 RCL1Q9Y2P8 373 aaKnown RBP2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 CARHSP1Q9Y2V2 147 aaKnown RBP2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 KPTNQ9Y664 436 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 TMEM56-RWDD3S4R434 201 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 NCOR1O75376 2440 aa2.68□□□□□ -1.98
HMGB3P6-201ENST00000444896 DNAJC13O75165 2243 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 KNTC1P50748 2209 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 RTTNQ86VV8 2226 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 TRAV17A0A0B4J275 112 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 UMAD1C9J7I0 102 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 H7C2Y5 167 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 SYNGR1O43759 233 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 SSSCA1O60232 199 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 HBE1P02100 147 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 SERPINE2P07093 398 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 SFTA3P0C7M3 94 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 OR8U9P0C7N5 309 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 TLX1NBP0CAT3 122 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 SLC25A6P12236 298 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 TUBG1P23258 451 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 CD200P41217 278 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 TFPI2P48307 235 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 KCNJ3P48549 501 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 AKR1C2P52895 323 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 PPP1CBP62140 327 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 RPL23AP62750 156 aaKnown RBP2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 FLI1Q01543 452 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 PEA15Q15121 130 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms