RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 ZNF207O43670 478 aaKnown RBP15.23■□□□□ 0.03
GTF3A-202ENST00000419181 NXPH3O95157 252 aa15.23■□□□□ 0.03
GTF3A-202ENST00000419181 OPRK1P41145 380 aa15.23■□□□□ 0.03
GTF3A-202ENST00000419181 CCR6P51684 374 aa15.23■□□□□ 0.03
GTF3A-202ENST00000419181 SMCO1Q147U7 214 aa15.23■□□□□ 0.03
GTF3A-202ENST00000419181 RBMS2Q15434 407 aaKnown RBP15.23■□□□□ 0.03
GTF3A-202ENST00000419181 RBPMS2Q6ZRY4 209 aaKnown RBP15.23■□□□□ 0.03
GTF3A-202ENST00000419181 SLC16A13Q7RTY0 426 aa15.23■□□□□ 0.03
GTF3A-202ENST00000419181 WFDC10AQ9H1F0 79 aa15.23■□□□□ 0.03
GTF3A-202ENST00000419181 ZMAT4Q9H898 229 aa15.23■□□□□ 0.03
GTF3A-202ENST00000419181 DUXBA0A1W2PPF3 345 aa15.22■□□□□ 0.03
GTF3A-202ENST00000419181 OR11H12B2RN74 326 aa15.22■□□□□ 0.03
GTF3A-202ENST00000419181 YIF1AO95070 293 aa15.22■□□□□ 0.03
GTF3A-202ENST00000419181 VAMP1P23763 118 aa15.22■□□□□ 0.03
GTF3A-202ENST00000419181 INPP1P49441 399 aa15.22■□□□□ 0.03
GTF3A-202ENST00000419181 TNFRSF9Q07011 255 aa15.22■□□□□ 0.03
GTF3A-202ENST00000419181 HAGHQ16775 308 aa15.22■□□□□ 0.03
GTF3A-202ENST00000419181 ANKRD55Q3KP44 614 aa15.22■□□□□ 0.03
GTF3A-202ENST00000419181 C2orf83Q53S99 150 aa15.22■□□□□ 0.03
GTF3A-202ENST00000419181 LINC00322Q6ZN03 302 aaPredicted RBP15.22■□□□□ 0.03
GTF3A-202ENST00000419181 DEFB125Q8N687 156 aa15.22■□□□□ 0.03
GTF3A-202ENST00000419181 LRTM2Q8N967 370 aa15.22■□□□□ 0.03
GTF3A-202ENST00000419181 SLC24A4Q8NFF2 622 aa15.22■□□□□ 0.03
GTF3A-202ENST00000419181 OR52B4Q8NGK2 314 aa15.22■□□□□ 0.03
GTF3A-202ENST00000419181 MRPL36Q9P0J6 103 aaKnown RBP15.22■□□□□ 0.03
GTF3A-202ENST00000419181 HSPB7Q9UBY9 170 aa15.22■□□□□ 0.03
GTF3A-202ENST00000419181 NAP1L6A6NFF2 107 aa15.21■□□□□ 0.03
GTF3A-202ENST00000419181 TSPAN4O14817 238 aa15.21■□□□□ 0.03
GTF3A-202ENST00000419181 TMEM50AO95807 157 aa15.21■□□□□ 0.03
GTF3A-202ENST00000419181 PPP1R1AQ13522 171 aa15.21■□□□□ 0.03
GTF3A-202ENST00000419181 MLANAQ16655 118 aa15.21■□□□□ 0.03
GTF3A-202ENST00000419181 CENPSQ8N2Z9 138 aa15.21■□□□□ 0.03
GTF3A-202ENST00000419181 OR4X1Q8NH49 305 aa15.21■□□□□ 0.03
GTF3A-202ENST00000419181 TMEM170AQ8WVE7 144 aa15.21■□□□□ 0.03
GTF3A-202ENST00000419181 SPAG8Q99932 426 aaPredicted RBP15.21■□□□□ 0.03
GTF3A-202ENST00000419181 SMPXQ9UHP9 88 aa15.21■□□□□ 0.03
GTF3A-202ENST00000419181 IGHV7-4-1A0A0J9YVY3 117 aa15.2■□□□□ 0.02
GTF3A-202ENST00000419181 A0A1B0GU03 582 aa15.2■□□□□ 0.02
GTF3A-202ENST00000419181 CLN5O75503 358 aa15.2■□□□□ 0.02
GTF3A-202ENST00000419181 SFT2D2O95562 160 aa15.2■□□□□ 0.02
GTF3A-202ENST00000419181 TOMM20LQ6UXN7 152 aa15.2■□□□□ 0.02
GTF3A-202ENST00000419181 ZNF600Q6ZNG1 722 aa15.2■□□□□ 0.02
GTF3A-202ENST00000419181 RNASEH2CQ8TDP1 164 aaKnown RBP15.2■□□□□ 0.02
GTF3A-202ENST00000419181 HIPK2Q9H2X6 1198 aa15.2■□□□□ 0.02
GTF3A-202ENST00000419181 SRD5A3Q9H8P0 318 aa15.2■□□□□ 0.02
GTF3A-202ENST00000419181 NDUFB6O95139 128 aa15.19■□□□□ 0.02
GTF3A-202ENST00000419181 IL7P13232 177 aa15.19■□□□□ 0.02
GTF3A-202ENST00000419181 NPY1RP25929 384 aa15.19■□□□□ 0.02
GTF3A-202ENST00000419181 LAMTOR1Q6IAA8 161 aa15.19■□□□□ 0.02
GTF3A-202ENST00000419181 TMEM116Q8NCL8 245 aa15.19■□□□□ 0.02
GTF3A-202ENST00000419181 RHPN1-AS1Q9BWJ2 59 aa15.19■□□□□ 0.02
GTF3A-202ENST00000419181 ZFAND3Q9H8U3 227 aa15.19■□□□□ 0.02
GTF3A-202ENST00000419181 NBEAL2Q6ZNJ1 2754 aa15.19■□□□□ 0.02
GTF3A-202ENST00000419181 TRAV14DV4A0A0A6YYC5 116 aa15.18■□□□□ 0.02
GTF3A-202ENST00000419181 RPS10-NUDT3A0A1W2PQS6 291 aa15.18■□□□□ 0.02
GTF3A-202ENST00000419181 RBMY1BA6NDE4 496 aaKnown RBP15.18■□□□□ 0.02
GTF3A-202ENST00000419181 RBMY1EA6NEQ0 496 aaKnown RBP15.18■□□□□ 0.02
GTF3A-202ENST00000419181 CHEK1O14757 476 aa15.18■□□□□ 0.02
GTF3A-202ENST00000419181 PITX3O75364 302 aa15.18■□□□□ 0.02
GTF3A-202ENST00000419181 RBMY1DP0C7P1 496 aaKnown RBP15.18■□□□□ 0.02
GTF3A-202ENST00000419181 UBE2MP61081 183 aaKnown RBP15.18■□□□□ 0.02
GTF3A-202ENST00000419181 OR1S1Q8NH92 325 aa15.18■□□□□ 0.02
GTF3A-202ENST00000419181 DTD1Q8TEA8 209 aa15.18■□□□□ 0.02
GTF3A-202ENST00000419181 RNF2Q99496 336 aa15.18■□□□□ 0.02
GTF3A-202ENST00000419181 SPATA25Q9BR10 227 aa15.18■□□□□ 0.02
GTF3A-202ENST00000419181 GINS3Q9BRX5 216 aa15.18■□□□□ 0.02
GTF3A-202ENST00000419181 RBKSQ9H477 322 aa15.18■□□□□ 0.02
GTF3A-202ENST00000419181 PUS1Q9Y606 427 aaKnown RBP eCLIP15.18■□□□□ 0.02
GTF3A-202ENST00000419181 IGHV3-49A0A0A0MS15 119 aa15.17■□□□□ 0.02
GTF3A-202ENST00000419181 SLC25A6P12236 298 aa15.17■□□□□ 0.02
GTF3A-202ENST00000419181 BTCP35070 178 aa15.17■□□□□ 0.02
GTF3A-202ENST00000419181 PRSS54Q6PEW0 395 aa15.17■□□□□ 0.02
GTF3A-202ENST00000419181 NOXA1Q86UR1 476 aa15.17■□□□□ 0.02
GTF3A-202ENST00000419181 C7orf50Q9BRJ6 194 aaKnown RBP15.17■□□□□ 0.02
GTF3A-202ENST00000419181 U3KQ87 197 aa15.17■□□□□ 0.02
GTF3A-202ENST00000419181 LINC00854A0A1B0GVQ3 168 aa15.16■□□□□ 0.02
GTF3A-202ENST00000419181 IGKV1-17P01599 117 aa15.16■□□□□ 0.02
GTF3A-202ENST00000419181 SLC25A4P12235 298 aa15.16■□□□□ 0.02
GTF3A-202ENST00000419181 TMED3Q9Y3Q3 217 aa15.16■□□□□ 0.02
GTF3A-202ENST00000419181 TRAV30A0A087WSZ9 112 aa15.15■□□□□ 0.02
GTF3A-202ENST00000419181 CENPXA8MT69 81 aa15.15■□□□□ 0.02
GTF3A-202ENST00000419181 SCGB2A1O75556 95 aa15.15■□□□□ 0.02
GTF3A-202ENST00000419181 IFNA10P01566 189 aa15.15■□□□□ 0.02
GTF3A-202ENST00000419181 RND2P52198 227 aa15.15■□□□□ 0.02
GTF3A-202ENST00000419181 FLVCR2Q9UPI3 526 aa15.15■□□□□ 0.02
GTF3A-202ENST00000419181 IGHV3OR16-13A0A075B7E8 117 aa15.14■□□□□ 0.01
GTF3A-202ENST00000419181 IGHV3-74A0A0B4J1X5 117 aa15.14■□□□□ 0.01
GTF3A-202ENST00000419181 C9orf170A2RU37 121 aa15.14■□□□□ 0.01
GTF3A-202ENST00000419181 OR4C46A6NHA9 309 aa15.14■□□□□ 0.01
GTF3A-202ENST00000419181 IGLC1P0CG04 106 aa15.14■□□□□ 0.01
GTF3A-202ENST00000419181 TIGITQ495A1 244 aa15.14■□□□□ 0.01
GTF3A-202ENST00000419181 FAM90A2PQ658T7 463 aa15.14■□□□□ 0.01
GTF3A-202ENST00000419181 ETFRF1Q6IPR1 90 aa15.14■□□□□ 0.01
GTF3A-202ENST00000419181 CITED4Q96RK1 184 aa15.14■□□□□ 0.01
GTF3A-202ENST00000419181 VSIRQ9H7M9 311 aa15.14■□□□□ 0.01
GTF3A-202ENST00000419181 FAM90A26D6RGX4 464 aa15.13■□□□□ 0.01
GTF3A-202ENST00000419181 APOHP02749 345 aaPredicted RBP15.13■□□□□ 0.01
GTF3A-202ENST00000419181 BMI1P35226 326 aa15.13■□□□□ 0.01
GTF3A-202ENST00000419181 ATP5IP56385 69 aaPredicted RBP15.13■□□□□ 0.01
GTF3A-202ENST00000419181 ODF3L2Q3SX64 289 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms