RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 PYDC2Q56P42 97 aa13.19□□□□□ -0.3
LSM5-204ENST00000409909 LAMTOR1Q6IAA8 161 aa13.19□□□□□ -0.3
LSM5-204ENST00000409909 TMEM116Q8NCL8 245 aa13.19□□□□□ -0.3
LSM5-204ENST00000409909 DUSP18Q8NEJ0 188 aa13.19□□□□□ -0.3
LSM5-204ENST00000409909 OR52E5Q8NH55 327 aa13.19□□□□□ -0.3
LSM5-204ENST00000409909 GALNT14Q96FL9 552 aa13.19□□□□□ -0.3
LSM5-204ENST00000409909 RNF2Q99496 336 aa13.19□□□□□ -0.3
LSM5-204ENST00000409909 RHPN1-AS1Q9BWJ2 59 aa13.19□□□□□ -0.3
LSM5-204ENST00000409909 ENY2Q9NPA8 101 aa13.19□□□□□ -0.3
LSM5-204ENST00000409909 TMEM50AO95807 157 aa13.18□□□□□ -0.3
LSM5-204ENST00000409909 AKR1C4P17516 323 aa13.18□□□□□ -0.3
LSM5-204ENST00000409909 NPBWR1P48145 328 aa13.18□□□□□ -0.3
LSM5-204ENST00000409909 TOMM20LQ6UXN7 152 aa13.18□□□□□ -0.3
LSM5-204ENST00000409909 UBQLN2Q9UHD9 624 aa13.18□□□□□ -0.3
LSM5-204ENST00000409909 IGHV3OR16-13A0A075B7E8 117 aa13.17□□□□□ -0.3
LSM5-204ENST00000409909 TRAV14DV4A0A0A6YYC5 116 aa13.17□□□□□ -0.3
LSM5-204ENST00000409909 IGHV3-74A0A0B4J1X5 117 aa13.17□□□□□ -0.3
LSM5-204ENST00000409909 CORTO00230 105 aa13.17□□□□□ -0.3
LSM5-204ENST00000409909 ODF3L2Q3SX64 289 aa13.17□□□□□ -0.3
LSM5-204ENST00000409909 CCDC190Q86UF4 302 aa13.17□□□□□ -0.3
LSM5-204ENST00000409909 IL22RA2Q969J5 263 aa13.17□□□□□ -0.3
LSM5-204ENST00000409909 SCGB3A2Q96PL1 93 aa13.17□□□□□ -0.3
LSM5-204ENST00000409909 KCNIP3Q9Y2W7 256 aa13.17□□□□□ -0.3
LSM5-204ENST00000409909 SACSQ9NZJ4 4579 aa13.17□□□□□ -0.3
LSM5-204ENST00000409909 A0A1B0GU03 582 aa13.16□□□□□ -0.3
LSM5-204ENST00000409909 ZFAND6Q6FIF0 208 aa13.16□□□□□ -0.3
LSM5-204ENST00000409909 TMEM170AQ8WVE7 144 aa13.16□□□□□ -0.3
LSM5-204ENST00000409909 GGTLC1Q9BX51 225 aa13.16□□□□□ -0.3
LSM5-204ENST00000409909 ZFAND3Q9H8U3 227 aa13.16□□□□□ -0.3
LSM5-204ENST00000409909 HEYLQ9NQ87 328 aaPredicted RBP13.16□□□□□ -0.3
LSM5-204ENST00000409909 PUS1Q9Y606 427 aaKnown RBP eCLIP13.16□□□□□ -0.3
LSM5-204ENST00000409909 LOC102724200A0A096LPH7 203 aaPredicted RBP13.15□□□□□ -0.3
LSM5-204ENST00000409909 CLN5O75503 358 aa13.15□□□□□ -0.3
LSM5-204ENST00000409909 NXPH3O95157 252 aa13.15□□□□□ -0.3
LSM5-204ENST00000409909 APOHP02749 345 aaPredicted RBP13.15□□□□□ -0.3
LSM5-204ENST00000409909 S100A5P33763 92 aa13.15□□□□□ -0.3
LSM5-204ENST00000409909 OPRK1P41145 380 aa13.15□□□□□ -0.3
LSM5-204ENST00000409909 HTR2BP41595 481 aa13.15□□□□□ -0.3
LSM5-204ENST00000409909 NMSQ5H8A3 153 aa13.15□□□□□ -0.3
LSM5-204ENST00000409909 FAM90A2PQ658T7 463 aa13.15□□□□□ -0.3
LSM5-204ENST00000409909 ZNF600Q6ZNG1 722 aa13.15□□□□□ -0.3
LSM5-204ENST00000409909 LYZL2Q7Z4W2 148 aa13.15□□□□□ -0.3
LSM5-204ENST00000409909 LILRB2Q8N423 598 aa13.15□□□□□ -0.3
LSM5-204ENST00000409909 TOMM5Q8N4H5 51 aa13.15□□□□□ -0.3
LSM5-204ENST00000409909 OR4X1Q8NH49 305 aa13.15□□□□□ -0.3
LSM5-204ENST00000409909 RYR2Q92736 4967 aa13.14□□□□□ -0.31
LSM5-204ENST00000409909 OR4C46A6NHA9 309 aa13.14□□□□□ -0.31
LSM5-204ENST00000409909 CEBPZOSA8MTT3 80 aa13.14□□□□□ -0.31
LSM5-204ENST00000409909 ZNF701M0R085 212 aaPredicted RBP13.14□□□□□ -0.31
LSM5-204ENST00000409909 SULT1A3P0DMM9 295 aa13.14□□□□□ -0.31
LSM5-204ENST00000409909 SULT1A4P0DMN0 295 aa13.14□□□□□ -0.31
LSM5-204ENST00000409909 FAUP35544 74 aaKnown RBP13.14□□□□□ -0.31
LSM5-204ENST00000409909 C2orf83Q53S99 150 aa13.14□□□□□ -0.31
LSM5-204ENST00000409909 LYSTQ99698 3801 aa13.14□□□□□ -0.31
LSM5-204ENST00000409909 A0A0B4J2A0 478 aa13.13□□□□□ -0.31
LSM5-204ENST00000409909 IGKV1-17P01599 117 aa13.13□□□□□ -0.31
LSM5-204ENST00000409909 AP3S2P59780 193 aa13.13□□□□□ -0.31
LSM5-204ENST00000409909 ST8SIA2Q92186 375 aa13.13□□□□□ -0.31
LSM5-204ENST00000409909 OVOL2Q9BRP0 275 aa13.13□□□□□ -0.31
LSM5-204ENST00000409909 GINS3Q9BRX5 216 aa13.13□□□□□ -0.31
LSM5-204ENST00000409909 VSIRQ9H7M9 311 aa13.13□□□□□ -0.31
LSM5-204ENST00000409909 SHPKQ9UHJ6 478 aa13.13□□□□□ -0.31
LSM5-204ENST00000409909 IGKV3-7A0A075B6H7 116 aa13.12□□□□□ -0.31
LSM5-204ENST00000409909 IGHV3-66A0A0C4DH42 116 aa13.12□□□□□ -0.31
LSM5-204ENST00000409909 TFPI2P48307 235 aa13.12□□□□□ -0.31
LSM5-204ENST00000409909 CCR6P51684 374 aa13.12□□□□□ -0.31
LSM5-204ENST00000409909 TNFRSF9Q07011 255 aa13.12□□□□□ -0.31
LSM5-204ENST00000409909 SMCO1Q147U7 214 aa13.12□□□□□ -0.31
LSM5-204ENST00000409909 TIGITQ495A1 244 aa13.12□□□□□ -0.31
LSM5-204ENST00000409909 TMED4Q7Z7H5 227 aa13.12□□□□□ -0.31
LSM5-204ENST00000409909 LGI3Q8N145 548 aa13.12□□□□□ -0.31
LSM5-204ENST00000409909 SLC24A4Q8NFF2 622 aa13.12□□□□□ -0.31
LSM5-204ENST00000409909 ANXA3P12429 323 aa13.11□□□□□ -0.31
LSM5-204ENST00000409909 ZNF124Q15973 351 aa13.11□□□□□ -0.31
LSM5-204ENST00000409909 TMEM128Q5BJH2 165 aa13.11□□□□□ -0.31
LSM5-204ENST00000409909 PRSS54Q6PEW0 395 aa13.11□□□□□ -0.31
LSM5-204ENST00000409909 TCF24Q7RTU0 167 aa13.11□□□□□ -0.31
LSM5-204ENST00000409909 APRG1Q8IVJ8 170 aa13.11□□□□□ -0.31
LSM5-204ENST00000409909 GBGT1Q8N5D6 347 aa13.11□□□□□ -0.31
LSM5-204ENST00000409909 RNASEH2CQ8TDP1 164 aaKnown RBP13.11□□□□□ -0.31
LSM5-204ENST00000409909 HSPB7Q9UBY9 170 aa13.11□□□□□ -0.31
LSM5-204ENST00000409909 RPS10-NUDT3A0A1W2PQS6 291 aa13.1□□□□□ -0.31
LSM5-204ENST00000409909 DFFBO76075 338 aa13.1□□□□□ -0.31
LSM5-204ENST00000409909 RND2P52198 227 aa13.1□□□□□ -0.31
LSM5-204ENST00000409909 SRPXP78539 464 aa13.1□□□□□ -0.31
LSM5-204ENST00000409909 DEDD2Q8WXF8 326 aa13.1□□□□□ -0.31
LSM5-204ENST00000409909 SRRQ9GZT4 340 aa13.1□□□□□ -0.31
LSM5-204ENST00000409909 RBKSQ9H477 322 aa13.1□□□□□ -0.31
LSM5-204ENST00000409909 CACFD1Q9UGQ2 172 aa13.1□□□□□ -0.31
LSM5-204ENST00000409909 IGLC1P0CG04 106 aa13.09□□□□□ -0.31
LSM5-204ENST00000409909 NPPCP23582 126 aa13.09□□□□□ -0.31
LSM5-204ENST00000409909 NPY1RP25929 384 aa13.09□□□□□ -0.31
LSM5-204ENST00000409909 SPANXN2Q5MJ10 180 aa13.09□□□□□ -0.31
LSM5-204ENST00000409909 SLC25A21Q9BQT8 299 aaPredicted RBP13.09□□□□□ -0.31
LSM5-204ENST00000409909 TRAV30A0A087WSZ9 112 aa13.08□□□□□ -0.32
LSM5-204ENST00000409909 PITX3O75364 302 aa13.08□□□□□ -0.32
LSM5-204ENST00000409909 CD5P06127 495 aa13.08□□□□□ -0.32
LSM5-204ENST00000409909 SLC25A4P12235 298 aa13.08□□□□□ -0.32
LSM5-204ENST00000409909 RPL35AP18077 110 aaKnown RBP13.08□□□□□ -0.32
LSM5-204ENST00000409909 CRYBB3P26998 211 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms