RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 RNASE7Q9H1E1 156 aaKnown RBP8.11□□□□□ -1.11
CSMD1-202ENST00000400186 TUBA4BQ9H853 241 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 FBXL7Q9UJT9 491 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 TMPRSS3P57727 454 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 C21orf62Q9NYP8 219 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 C4orf51C9J302 202 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 HIST1H2BKO60814 126 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 DPM2O94777 84 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 HIST1H2BJP06899 126 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 MALP21145 153 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 HIST1H2BOP23527 126 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 HIST1H2BBP33778 126 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 CRYBA2P53672 197 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 HIST1H2BDP58876 126 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 HIST1H2BCP62807 126 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 HIST2H2BEQ16778 126 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.11□□□□□ -1.11
CSMD1-202ENST00000400186 HIST1H2BHQ93079 126 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 SIGMAR1Q99720 223 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 HIST1H2BNQ99877 126 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 HIST1H2BMQ99879 126 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 TRAV21A0A0B4J279 112 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 C5orf67F2Z3F1 127 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 TM4SF5O14894 197 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 RTBDNQ9BSG5 229 aaPredicted RBP8.11□□□□□ -1.11
CSMD1-202ENST00000400186 TM2D1Q9BX74 207 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 TBX6O95947 436 aaPredicted RBP8.11□□□□□ -1.11
CSMD1-202ENST00000400186 A0A0G2JLM5 398 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 LINC01590Q5TEZ4 76 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 B9A039 149 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 CDCP2Q5VXM1 449 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 TMEM42Q69YG0 159 aa8.11□□□□□ -1.11
CSMD1-202ENST00000400186 C17orf98A8MV24 154 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 PF4P02776 101 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 PILRBQ9UKJ0 227 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 CENPVQ7Z7K6 275 aaPredicted RBP8.1□□□□□ -1.11
CSMD1-202ENST00000400186 PHLDA1Q8WV24 401 aaPredicted RBP8.1□□□□□ -1.11
CSMD1-202ENST00000400186 TMEM106BQ9NUM4 274 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 J3QW42 95 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 UCP1P25874 307 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 TMEM54Q969K7 222 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 IGHV3OR16-10A0A075B7F0 116 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 TDGF1P13385 188 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 ATP5G3P48201 142 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 TMEM170AQ8WVE7 144 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 ITLN2Q8WWU7 325 aaPredicted RBP8.1□□□□□ -1.11
CSMD1-202ENST00000400186 SLC25A2Q9BXI2 301 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 TRAV8-4A0A0B4J246 113 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 KIR3DL3Q8N743 410 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 SEPSECSQ9HD40 501 aaKnown RBP8.1□□□□□ -1.11
CSMD1-202ENST00000400186 Q6ZT83 130 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 ASCL2Q99929 193 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 MIR17HGQ75NE6 70 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 COQ2Q96H96 371 aa8.1□□□□□ -1.11
CSMD1-202ENST00000400186 NDUFS8O00217 210 aa8.09□□□□□ -1.11
CSMD1-202ENST00000400186 C1QL2Q7Z5L3 287 aa8.09□□□□□ -1.11
CSMD1-202ENST00000400186 YAE1D1Q9NRH1 226 aa8.09□□□□□ -1.11
CSMD1-202ENST00000400186 DSCAMO60469 2012 aa8.09□□□□□ -1.11
CSMD1-202ENST00000400186 C12orf77C9JDV5 145 aa8.09□□□□□ -1.11
CSMD1-202ENST00000400186 ADMP35318 185 aa8.09□□□□□ -1.11
CSMD1-202ENST00000400186 OTORQ9NRC9 128 aa8.09□□□□□ -1.11
CSMD1-202ENST00000400186 GNG5P63218 68 aa8.09□□□□□ -1.11
CSMD1-202ENST00000400186 LINC01587Q99440 93 aa8.09□□□□□ -1.11
CSMD1-202ENST00000400186 LTBP4Q8N2S1 1624 aa8.09□□□□□ -1.11
CSMD1-202ENST00000400186 IGKV1D-33P01593 117 aa8.09□□□□□ -1.11
CSMD1-202ENST00000400186 IGKV1-33P01594 117 aa8.09□□□□□ -1.11
CSMD1-202ENST00000400186 ZNF362Q5T0B9 420 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-202ENST00000400186 ZFAND6Q6FIF0 208 aa8.09□□□□□ -1.11
CSMD1-202ENST00000400186 IFI27P40305 119 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-202ENST00000400186 PDLIM4P50479 330 aa8.09□□□□□ -1.11
CSMD1-202ENST00000400186 SRSF4Q08170 494 aaKnown RBP8.09□□□□□ -1.11
CSMD1-202ENST00000400186 PROB1E7EW31 1015 aa8.09□□□□□ -1.11
CSMD1-202ENST00000400186 MRPL20Q9BYC9 149 aaKnown RBP8.09□□□□□ -1.11
CSMD1-202ENST00000400186 NOTCH4Q99466 2003 aa8.09□□□□□ -1.12
CSMD1-202ENST00000400186 GHRHP01286 108 aa8.09□□□□□ -1.12
CSMD1-202ENST00000400186 SPRED2Q7Z698 418 aa8.09□□□□□ -1.12
CSMD1-202ENST00000400186 IGHV3OR16-8A0A075B7F1 116 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 KBTBD11-OT1A0A1B0GTJ5 212 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 FOXH1O75593 365 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 JMJD8Q96S16 334 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 ST20Q9HBF5 79 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 TECTAO75443 2155 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 HBDP02042 147 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 LAIR2Q6ISS4 152 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 CEP192Q8TEP8 1941 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 GGTLC3B5MD39 225 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 UBE2CO00762 179 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 ATXN7O15265 892 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-202ENST00000400186 HOXA3O43365 443 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-202ENST00000400186 CRPP02741 224 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 SEC11AP67812 179 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 TIMM23BQ5SRD1 257 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 SAMD5Q5TGI4 173 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 SLC25A45Q8N413 288 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 HS3ST3B1Q9Y662 390 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 RAMP3O60896 148 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 NXT2Q9NPJ8 142 aaKnown RBP8.08□□□□□ -1.12
CSMD1-202ENST00000400186 RPL23P62829 140 aaKnown RBP8.08□□□□□ -1.12
CSMD1-202ENST00000400186 SLC25A15Q9Y619 301 aa8.08□□□□□ -1.12
CSMD1-202ENST00000400186 ALPK3Q96L96 1907 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms