RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 SKA2Q8WVK7 121 aaPredicted RBP1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 HIST1H2BHQ93079 126 aa1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 EXOSC8Q96B26 276 aaKnown RBP1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 HIST1H2BNQ99877 126 aa1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 HIST1H2BMQ99879 126 aa1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 HSPB9Q9BQS6 159 aa1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 NKX6-2Q9C056 277 aaPredicted RBP1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 AICDAQ9GZX7 198 aa1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 PBOV1Q9GZY1 135 aa1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 FAM96AQ9H5X1 160 aa1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 TPT1P8Q9HAU6 139 aa1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 CACYBPQ9HB71 228 aaKnown RBP1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 NIT2Q9NQR4 276 aa1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 HSPB8Q9UJY1 196 aa1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 SNX12Q9UMY4 172 aa1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 NCKAP5O14513 1909 aa1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 TRPM1Q7Z4N2 1603 aa1.26□□□□□ -2.21
SNORA40.19-201ENST00000390846 OVOS2A0A0G2JMS6 1433 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 FMN1Q68DA7 1419 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 TANC2Q9HCD6 1990 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 PLXNA3P51805 1871 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 CCDC171Q6TFL3 1326 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 IGLV4-69A0A075B6H9 119 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 COLCA2A8K830 154 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 B4DSR2 109 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 C9JAW5 83 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 OVOL1O14753 267 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 DLEU1O43261 78 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 IFNA7P01567 189 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 IGKV3-15P01624 115 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 MT-ND4LP03901 98 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 MPC1LP0DKB6 136 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 SLC25A16P16260 332 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 CSRP1P21291 193 aaKnown RBP1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 CD200P41217 278 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 RAB5CP51148 216 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 RPS28P62857 69 aaKnown RBP1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 SUPT4H1P63272 117 aaKnown RBP1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 RHOGP84095 191 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 MOBPQ13875 183 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 ZNF141Q15928 474 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 RRN3P1Q2M238 152 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 CCSMST1Q4G0I0 132 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 AMTNQ6UX39 209 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 TMEM136Q6ZRR5 245 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 PRR15Q8IV56 129 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 TMEM229BQ8NBD8 167 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 NUP35Q8NFH5 326 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 OR4C16Q8NGL9 310 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 OR9Q1Q8NGQ5 310 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 OR13C4Q8NGS5 318 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 HIST1H2BAQ96A08 127 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 TEX37Q96LM6 180 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 C2orf88Q9BSF0 95 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 OR2H1Q9GZK4 316 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 COMMD5Q9GZQ3 224 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 HIGD1AQ9Y241 93 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 U3KQ87 197 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 ARID1AO14497 2285 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 NUMA1Q14980 2115 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 RIMBP3CA6NJZ7 1639 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 RIMBP3BA6NNM3 1639 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 RIMBP3Q9UFD9 1639 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 MYH13Q9UKX3 1938 aa1.25□□□□□ -2.21
SNORA40.19-201ENST00000390846 MYO16Q9Y6X6 1858 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 POLEQ07864 2286 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 OVOS2A0A0J9YW53 1432 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 OVOS2Q6IE36 1432 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 SPATA31E1Q6ZUB1 1445 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 KIDINS220Q9ULH0 1771 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 PIK3C2AO00443 1686 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 MEIKINA0A087WXM9 373 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 IGHV3-15A0A0B4J1V0 119 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 TRAV38-1A0A0B4J264 116 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 DHRS12A0PJE2 317 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 TMEM189A5PLL7 270 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 A8MWP6 167 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 CYB5BO43169 146 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 CST8O60676 142 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 IGHV1-69P01742 117 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 UBBP0CG47 229 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 MUC1P15941 1255 aaPredicted RBP1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 NFYBP25208 207 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 CCR2P41597 374 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 CSN1S1P47710 185 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 NUDT2P50583 147 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 ARPP19P56211 112 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 PSG9Q00887 426 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 MEF2BQ02080 365 aaPredicted RBP1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 FUT5Q11128 374 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 MORN2Q502X0 79 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 RPL13AP3Q6NVV1 102 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 Q6P435 159 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 AGTRAPQ6RW13 159 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 ZNF767PQ75MW2 155 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 BPIFA4PQ86YQ2 179 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 C3orf22Q8N5N4 141 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 TEX29Q8N6K0 151 aa1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 KLF14Q8TD94 323 aaPredicted RBP1.24□□□□□ -2.21
SNORA40.19-201ENST00000390846 MBD3L1Q8WWY6 194 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms